RNA–Protein interactions for RNA: ENST00000377011.6

VRK3-202, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VRK3, Length 1,749 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-202ENST00000377011 C9orf118A6NHY6 69 aa9.23□□□□□ -0.93
VRK3-202ENST00000377011 PRAC2D3DTV9 90 aa9.23□□□□□ -0.93
VRK3-202ENST00000377011 K7ERU9 68 aa9.23□□□□□ -0.93
VRK3-202ENST00000377011 ANKRD39Q53RE8 183 aa9.23□□□□□ -0.93
VRK3-202ENST00000377011 OCIAD2Q56VL3 154 aa9.23□□□□□ -0.93
VRK3-202ENST00000377011 DEFB121Q5J5C9 76 aa9.23□□□□□ -0.93
VRK3-202ENST00000377011 AGPAT4-IT1Q9H0P7 198 aa9.23□□□□□ -0.93
VRK3-202ENST00000377011 IGHV3-35A0A0C4DH35 117 aa9.22□□□□□ -0.93
VRK3-202ENST00000377011 SNAI2O43623 268 aa9.22□□□□□ -0.93
VRK3-202ENST00000377011 TNFRSF6BO95407 300 aa9.22□□□□□ -0.93
VRK3-202ENST00000377011 ERCC8Q13216 396 aa9.22□□□□□ -0.93
VRK3-202ENST00000377011 IGFL4Q6B9Z1 124 aa9.22□□□□□ -0.93
VRK3-202ENST00000377011 Q8N8P6 123 aa9.22□□□□□ -0.93
VRK3-202ENST00000377011 TP73-AS1Q9UF72 201 aa9.22□□□□□ -0.93
VRK3-202ENST00000377011 IGKV3D-20A0A0C4DH25 116 aa9.22□□□□□ -0.93
VRK3-202ENST00000377011 GAGE10A6NGK3 116 aa9.22□□□□□ -0.93
VRK3-202ENST00000377011 ATP5LO75964 103 aa9.22□□□□□ -0.93
VRK3-202ENST00000377011 HLA-DRB4P13762 266 aa9.22□□□□□ -0.93
VRK3-202ENST00000377011 ZMAT4Q9H898 229 aa9.22□□□□□ -0.93
VRK3-202ENST00000377011 HIGD1BQ9P298 99 aa9.22□□□□□ -0.93
VRK3-202ENST00000377011 HLA-DRB4X5D2U9 266 aa9.22□□□□□ -0.93
VRK3-202ENST00000377011 NBEAL2Q6ZNJ1 2754 aa9.21□□□□□ -0.93
VRK3-202ENST00000377011 STAB2Q8WWQ8 2551 aa9.21□□□□□ -0.93
VRK3-202ENST00000377011 TRAV8-6A0A0B4J262 113 aa9.21□□□□□ -0.94
VRK3-202ENST00000377011 GAGE12BA1L429 117 aa9.21□□□□□ -0.94
VRK3-202ENST00000377011 SMKR1H3BMG3 65 aa9.21□□□□□ -0.94
VRK3-202ENST00000377011 KIR3DS1Q14943 382 aa9.21□□□□□ -0.94
VRK3-202ENST00000377011 UNQ9165/PRO28630Q6UXU0 137 aa9.21□□□□□ -0.94
VRK3-202ENST00000377011 RNF182Q8N6D2 247 aa9.21□□□□□ -0.94
VRK3-202ENST00000377011 GLMPQ8WWB7 406 aa9.21□□□□□ -0.94
VRK3-202ENST00000377011 PRB4P10163 310 aaPredicted RBP9.2□□□□□ -0.94
VRK3-202ENST00000377011 COTL1Q14019 142 aa9.2□□□□□ -0.94
VRK3-202ENST00000377011 MSRB1Q9NZV6 116 aa9.2□□□□□ -0.94
VRK3-202ENST00000377011 ZNF256Q9Y2P7 627 aaPredicted RBP9.2□□□□□ -0.94
VRK3-202ENST00000377011 IGLV2-18A0A075B6J9 118 aa9.19□□□□□ -0.94
VRK3-202ENST00000377011 IGHV3OR16-8A0A075B7F1 116 aa9.19□□□□□ -0.94
VRK3-202ENST00000377011 IGHV7-4-1A0A0J9YVY3 117 aa9.19□□□□□ -0.94
VRK3-202ENST00000377011 TRBV7-9A0A0J9YWB2 115 aa9.19□□□□□ -0.94
VRK3-202ENST00000377011 NDUFA4O00483 81 aa9.19□□□□□ -0.94
VRK3-202ENST00000377011 IGLV1-51P01701 117 aa9.19□□□□□ -0.94
VRK3-202ENST00000377011 MED14OSP0DP75 135 aa9.19□□□□□ -0.94
VRK3-202ENST00000377011 LEPP41159 167 aa9.19□□□□□ -0.94
VRK3-202ENST00000377011 UFSP1Q6NVU6 142 aa9.19□□□□□ -0.94
VRK3-202ENST00000377011 OR2K2Q8NGT1 345 aa9.19□□□□□ -0.94
VRK3-202ENST00000377011 MRAP2Q96G30 205 aa9.19□□□□□ -0.94
VRK3-202ENST00000377011 LINC00477Q96M19 166 aa9.19□□□□□ -0.94
VRK3-202ENST00000377011 KMT2CQ8NEZ4 4911 aaKnown RBP9.19□□□□□ -0.94
VRK3-202ENST00000377011 ARL3P36405 182 aa9.19□□□□□ -0.94
VRK3-202ENST00000377011 ODF1Q14990 250 aa9.19□□□□□ -0.94
VRK3-202ENST00000377011 OR5A1Q8NGJ0 315 aa9.19□□□□□ -0.94
VRK3-202ENST00000377011 K7EMI3 77 aa9.18□□□□□ -0.94
VRK3-202ENST00000377011 K7EP34 96 aa9.18□□□□□ -0.94
VRK3-202ENST00000377011 EVI2AP22794 236 aa9.18□□□□□ -0.94
VRK3-202ENST00000377011 Q8N1Y9 231 aa9.18□□□□□ -0.94
VRK3-202ENST00000377011 C16orf92Q96LL3 132 aa9.18□□□□□ -0.94
VRK3-202ENST00000377011 C11orf21Q9P2W6 132 aa9.18□□□□□ -0.94
VRK3-202ENST00000377011 INSL3P51460 131 aa9.17□□□□□ -0.94
VRK3-202ENST00000377011 TM4SF20Q53R12 229 aa9.17□□□□□ -0.94
VRK3-202ENST00000377011 NRACQ8N912 160 aa9.17□□□□□ -0.94
VRK3-202ENST00000377011 DNAH7Q8WXX0 4024 aa9.17□□□□□ -0.94
VRK3-202ENST00000377011 IGHV3-66A0A0C4DH42 116 aa9.17□□□□□ -0.94
VRK3-202ENST00000377011 C21orf62-AS1Q17RA5 79 aa9.17□□□□□ -0.94
VRK3-202ENST00000377011 RNF151Q2KHN1 245 aa9.17□□□□□ -0.94
VRK3-202ENST00000377011 ERASQ7Z444 233 aa9.17□□□□□ -0.94
VRK3-202ENST00000377011 VPS25Q9BRG1 176 aa9.17□□□□□ -0.94
VRK3-202ENST00000377011 TRAV21A0A0B4J279 112 aa9.16□□□□□ -0.94
VRK3-202ENST00000377011 SOCS3O14543 225 aa9.16□□□□□ -0.94
VRK3-202ENST00000377011 DPM2O94777 84 aa9.16□□□□□ -0.94
VRK3-202ENST00000377011 IGKCP01834 107 aa9.16□□□□□ -0.94
VRK3-202ENST00000377011 LAGE3Q14657 143 aa9.16□□□□□ -0.94
VRK3-202ENST00000377011 CD300EQ496F6 205 aaPredicted RBP9.16□□□□□ -0.94
VRK3-202ENST00000377011 SAMD13Q5VXD3 122 aa9.16□□□□□ -0.94
VRK3-202ENST00000377011 APRG1Q8IVJ8 170 aa9.16□□□□□ -0.94
VRK3-202ENST00000377011 OR10J6PQ8NGY7 276 aa9.16□□□□□ -0.94
VRK3-202ENST00000377011 ZNF207O43670 478 aaKnown RBP9.15□□□□□ -0.94
VRK3-202ENST00000377011 SMIM13P0DJ93 91 aa9.15□□□□□ -0.94
VRK3-202ENST00000377011 NMUP48645 174 aa9.15□□□□□ -0.94
VRK3-202ENST00000377011 SPANXN1Q5VSR9 72 aa9.15□□□□□ -0.94
VRK3-202ENST00000377011 GPHB5Q86YW7 130 aa9.15□□□□□ -0.94
VRK3-202ENST00000377011 WFDC10AQ9H1F0 79 aa9.15□□□□□ -0.94
VRK3-202ENST00000377011 DKK2Q9UBU2 259 aa9.15□□□□□ -0.94
VRK3-202ENST00000377011 HHLA3Q9XRX5 114 aa9.15□□□□□ -0.94
VRK3-202ENST00000377011 A0A1W2PPM0 123 aa9.14□□□□□ -0.95
VRK3-202ENST00000377011 H3BUT2 72 aa9.14□□□□□ -0.95
VRK3-202ENST00000377011 M0R381 172 aa9.14□□□□□ -0.95
VRK3-202ENST00000377011 PRSS1P07477 247 aa9.14□□□□□ -0.95
VRK3-202ENST00000377011 SMIM17P0DL12 118 aa9.14□□□□□ -0.95
VRK3-202ENST00000377011 FXYD7P58549 80 aa9.14□□□□□ -0.95
VRK3-202ENST00000377011 DEFB114Q30KQ6 69 aa9.14□□□□□ -0.95
VRK3-202ENST00000377011 FAM19A4Q96LR4 140 aa9.14□□□□□ -0.95
VRK3-202ENST00000377011 C20orf78Q9BR46 151 aa9.14□□□□□ -0.95
VRK3-202ENST00000377011 IGHV3OR16-13A0A075B7E8 117 aa9.14□□□□□ -0.95
VRK3-202ENST00000377011 IGHV3-74A0A0B4J1X5 117 aa9.14□□□□□ -0.95
VRK3-202ENST00000377011 TRAV12-1A0A0B4J245 112 aa9.14□□□□□ -0.95
VRK3-202ENST00000377011 LGALS9O00182 355 aa9.14□□□□□ -0.95
VRK3-202ENST00000377011 GAS8-AS1O95177 125 aa9.14□□□□□ -0.95
VRK3-202ENST00000377011 PPP1R17O96001 155 aa9.14□□□□□ -0.95
VRK3-202ENST00000377011 FABP2P12104 132 aa9.14□□□□□ -0.95
VRK3-202ENST00000377011 TAL2Q16559 108 aa9.14□□□□□ -0.95
VRK3-202ENST00000377011 PCP2Q8IVA1 136 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 84.6 ms