RNA–Protein interactions for RNA: ENST00000375290.6

PTCH1-204, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 10,631 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-204ENST00000375290 PFN2P35080 140 aa7.91□□□□□ -1.14
PTCH1-204ENST00000375290 PYGO1Q9Y3Y4 419 aa7.9□□□□□ -1.14
PTCH1-204ENST00000375290 CRYGBP07316 175 aa7.9□□□□□ -1.14
PTCH1-204ENST00000375290 ZNF625Q96I27 306 aaPredicted RBP7.9□□□□□ -1.14
PTCH1-204ENST00000375290 COL8A2P25067 703 aa7.9□□□□□ -1.15
PTCH1-204ENST00000375290 TCL1BO95988 128 aa7.9□□□□□ -1.15
PTCH1-204ENST00000375290 IGLV1-47P01700 117 aa7.9□□□□□ -1.15
PTCH1-204ENST00000375290 ZNF503Q96F45 646 aa7.9□□□□□ -1.15
PTCH1-204ENST00000375290 DYSFO75923 2080 aa7.9□□□□□ -1.15
PTCH1-204ENST00000375290 HIGD2BQ4VC39 106 aa7.9□□□□□ -1.15
PTCH1-204ENST00000375290 IGHV3OR16-10A0A075B7F0 116 aa7.89□□□□□ -1.15
PTCH1-204ENST00000375290 TRAV4A0A0B4J268 109 aa7.89□□□□□ -1.15
PTCH1-204ENST00000375290 NDUFC2-KCTD14E9PQ53 114 aa7.89□□□□□ -1.15
PTCH1-204ENST00000375290 EIF4EBP1Q13541 118 aaPredicted RBP7.89□□□□□ -1.15
PTCH1-204ENST00000375290 ZNF503-AS2A6NEH8 195 aa7.89□□□□□ -1.15
PTCH1-204ENST00000375290 WT1P19544 449 aaPredicted RBP7.89□□□□□ -1.15
PTCH1-204ENST00000375290 ABCA4P78363 2273 aa7.89□□□□□ -1.15
PTCH1-204ENST00000375290 IGLV2-23P01705 113 aa7.89□□□□□ -1.15
PTCH1-204ENST00000375290 BPESC1Q9GZL8 116 aa7.89□□□□□ -1.15
PTCH1-204ENST00000375290 PCNX1Q96RV3 2341 aa7.89□□□□□ -1.15
PTCH1-204ENST00000375290 IGKV1OR2-108A0A075B7D4 117 aa7.89□□□□□ -1.15
PTCH1-204ENST00000375290 DKK4Q9UBT3 224 aa7.89□□□□□ -1.15
PTCH1-204ENST00000375290 UBE2E2Q96LR5 201 aa7.88□□□□□ -1.15
PTCH1-204ENST00000375290 RNF183Q96D59 192 aa7.88□□□□□ -1.15
PTCH1-204ENST00000375290 MED13LQ71F56 2210 aa7.88□□□□□ -1.15
PTCH1-204ENST00000375290 COLQQ9Y215 455 aaPredicted RBP7.88□□□□□ -1.15
PTCH1-204ENST00000375290 NREPQ16612 68 aa7.88□□□□□ -1.15
PTCH1-204ENST00000375290 CFAP126Q5VTH2 177 aa7.88□□□□□ -1.15
PTCH1-204ENST00000375290 CACNA1GO43497 2377 aa7.88□□□□□ -1.15
PTCH1-204ENST00000375290 LY6G6EA0A0G2JKS1 128 aa7.88□□□□□ -1.15
PTCH1-204ENST00000375290 DAD1P61803 113 aa7.88□□□□□ -1.15
PTCH1-204ENST00000375290 TPSG1Q9NRR2 321 aa7.88□□□□□ -1.15
PTCH1-204ENST00000375290 U3KQA8 63 aa7.88□□□□□ -1.15
PTCH1-204ENST00000375290 SERP2Q8N6R1 65 aa7.88□□□□□ -1.15
PTCH1-204ENST00000375290 TNCP24821 2201 aa7.88□□□□□ -1.15
PTCH1-204ENST00000375290 HOXB4P17483 251 aaPredicted RBP7.88□□□□□ -1.15
PTCH1-204ENST00000375290 MYCNOSP40205 109 aa7.88□□□□□ -1.15
PTCH1-204ENST00000375290 C5orf24Q7Z6I8 188 aa7.88□□□□□ -1.15
PTCH1-204ENST00000375290 VPREB3Q9UKI3 123 aa7.88□□□□□ -1.15
PTCH1-204ENST00000375290 ANKHD1Q8IWZ3 2542 aaKnown RBP7.87□□□□□ -1.15
PTCH1-204ENST00000375290 IGLV2-8P01709 118 aa7.87□□□□□ -1.15
PTCH1-204ENST00000375290 ODF3L1Q8IXM7 274 aa7.87□□□□□ -1.15
PTCH1-204ENST00000375290 ZNF524Q96C55 264 aa7.87□□□□□ -1.15
PTCH1-204ENST00000375290 COL5A1P20908 1838 aaPredicted RBP7.87□□□□□ -1.15
PTCH1-204ENST00000375290 SVIPQ8NHG7 77 aa7.87□□□□□ -1.15
PTCH1-204ENST00000375290 IGHV4-4A0A075B6R2 117 aa7.86□□□□□ -1.15
PTCH1-204ENST00000375290 IGHV7-81A0A0B4J1V7 117 aa7.86□□□□□ -1.15
PTCH1-204ENST00000375290 LYNX1G3V0Z9 82 aa7.86□□□□□ -1.15
PTCH1-204ENST00000375290 IGHV3-30-3P0DP02 117 aa7.86□□□□□ -1.15
PTCH1-204ENST00000375290 LYNX1P0DP58 116 aa7.86□□□□□ -1.15
PTCH1-204ENST00000375290 TIRAPP58753 221 aa7.86□□□□□ -1.15
PTCH1-204ENST00000375290 SELENOKQ9Y6D0 94 aa7.86□□□□□ -1.15
PTCH1-204ENST00000375290 FAM236DA0A1B0GTK5 79 aa7.86□□□□□ -1.15
PTCH1-204ENST00000375290 FAM236CP0DP71 79 aa7.86□□□□□ -1.15
PTCH1-204ENST00000375290 IGFL4Q6B9Z1 124 aa7.86□□□□□ -1.15
PTCH1-204ENST00000375290 CENPVL3A0A0U1RRI6 287 aa7.86□□□□□ -1.15
PTCH1-204ENST00000375290 FREM1Q5H8C1 2179 aa7.86□□□□□ -1.15
PTCH1-204ENST00000375290 IBA57-AS1B1ANH7 110 aa7.86□□□□□ -1.15
PTCH1-204ENST00000375290 TMEM105Q8N8V8 129 aa7.85□□□□□ -1.15
PTCH1-204ENST00000375290 RIF1Q5UIP0 2472 aaKnown RBP7.85□□□□□ -1.15
PTCH1-204ENST00000375290 KLK9Q9UKQ9 250 aa7.85□□□□□ -1.15
PTCH1-204ENST00000375290 TMEM61Q8N0U2 210 aa7.85□□□□□ -1.15
PTCH1-204ENST00000375290 TRBV6-5A0A0K0K1A5 114 aa7.85□□□□□ -1.15
PTCH1-204ENST00000375290 COL4A3Q01955 1670 aa7.85□□□□□ -1.15
PTCH1-204ENST00000375290 TRBV27A0A0K0K1C4 114 aa7.85□□□□□ -1.15
PTCH1-204ENST00000375290 A0A0J9YXV3 536 aa7.84□□□□□ -1.15
PTCH1-204ENST00000375290 PTH2Q96A98 100 aa7.84□□□□□ -1.15
PTCH1-204ENST00000375290 CGB3P0DN86 165 aa7.84□□□□□ -1.15
PTCH1-204ENST00000375290 CGB7P0DN87 165 aa7.84□□□□□ -1.15
PTCH1-204ENST00000375290 COX7CP15954 63 aa7.84□□□□□ -1.15
PTCH1-204ENST00000375290 FGF23Q9GZV9 251 aaPredicted RBP7.84□□□□□ -1.15
PTCH1-204ENST00000375290 ZMAT4Q9H898 229 aa7.84□□□□□ -1.15
PTCH1-204ENST00000375290 FAM215AQ9Y5M1 114 aa7.84□□□□□ -1.15
PTCH1-204ENST00000375290 K7ENP7 123 aa7.84□□□□□ -1.15
PTCH1-204ENST00000375290 FBXL19-AS1Q494R0 122 aa7.84□□□□□ -1.15
PTCH1-204ENST00000375290 LINC00173Q6ZV60 143 aa7.84□□□□□ -1.15
PTCH1-204ENST00000375290 CLUHP3Q96NS8 147 aa7.84□□□□□ -1.15
PTCH1-204ENST00000375290 NFE4Q86UQ8 179 aa7.84□□□□□ -1.16
PTCH1-204ENST00000375290 RPL39LQ96EH5 51 aaKnown RBP7.84□□□□□ -1.16
PTCH1-204ENST00000375290 A0A0J9YY99 117 aa7.83□□□□□ -1.16
PTCH1-204ENST00000375290 UFSP1Q6NVU6 142 aa7.83□□□□□ -1.16
PTCH1-204ENST00000375290 IGHV4OR15-8A0A075B7B6 117 aa7.83□□□□□ -1.16
PTCH1-204ENST00000375290 A0A087WW49 117 aa7.83□□□□□ -1.16
PTCH1-204ENST00000375290 G3V318 75 aa7.83□□□□□ -1.16
PTCH1-204ENST00000375290 NDUFA1O15239 70 aa7.83□□□□□ -1.16
PTCH1-204ENST00000375290 PSCAO43653 123 aa7.83□□□□□ -1.16
PTCH1-204ENST00000375290 PLA2G2CQ5R387 149 aa7.83□□□□□ -1.16
PTCH1-204ENST00000375290 DEFB130BP0DP73 79 aa7.83□□□□□ -1.16
PTCH1-204ENST00000375290 DEFB130AP0DP74 79 aa7.83□□□□□ -1.16
PTCH1-204ENST00000375290 ZNF295-AS1Q8N0V1 137 aa7.83□□□□□ -1.16
PTCH1-204ENST00000375290 MRGPRG-AS1Q2M3A8 158 aa7.83□□□□□ -1.16
PTCH1-204ENST00000375290 TMEM263Q8WUH6 116 aaKnown RBP7.83□□□□□ -1.16
PTCH1-204ENST00000375290 XCL2Q9UBD3 114 aa7.83□□□□□ -1.16
PTCH1-204ENST00000375290 COL6A6A6NMZ7 2263 aa7.83□□□□□ -1.16
PTCH1-204ENST00000375290 ARHGAP21Q5T5U3 1957 aa7.83□□□□□ -1.16
PTCH1-204ENST00000375290 IGKV1D-37A0A075B6S9 117 aa7.83□□□□□ -1.16
PTCH1-204ENST00000375290 C2orf91Q6ZV80 131 aa7.83□□□□□ -1.16
PTCH1-204ENST00000375290 C17orf77Q96MU5 243 aa7.82□□□□□ -1.16
PTCH1-204ENST00000375290 HTN3P15516 51 aa7.82□□□□□ -1.16
PTCH1-204ENST00000375290 COX17Q14061 63 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 308.9 ms