RNA–Protein interactions for RNA: ENST00000375274.6

PTCH1-203, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 4,720 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-203ENST00000375274 GAGE6Q13070 117 aa8.92□□□□□ -0.98
PTCH1-203ENST00000375274 C9orf47Q6ZRZ4 202 aa8.92□□□□□ -0.98
PTCH1-203ENST00000375274 TANC2Q9HCD6 1990 aa8.91□□□□□ -0.98
PTCH1-203ENST00000375274 NCOR2Q9Y618 2525 aa8.91□□□□□ -0.98
PTCH1-203ENST00000375274 E9PLD3 99 aa8.9□□□□□ -0.98
PTCH1-203ENST00000375274 IGHV4-59P01825 116 aa8.9□□□□□ -0.98
PTCH1-203ENST00000375274 TEN1Q86WV5 123 aa8.9□□□□□ -0.98
PTCH1-203ENST00000375274 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.9□□□□□ -0.98
PTCH1-203ENST00000375274 IGKV2-29A2NJV5 120 aaPredicted RBP8.9□□□□□ -0.98
PTCH1-203ENST00000375274 NXPH4O95158 308 aa8.9□□□□□ -0.98
PTCH1-203ENST00000375274 HOXD3P31249 432 aaPredicted RBP8.9□□□□□ -0.98
PTCH1-203ENST00000375274 RPL39P62891 51 aaKnown RBP8.9□□□□□ -0.98
PTCH1-203ENST00000375274 TRAV13-2A0A0B4J235 113 aa8.9□□□□□ -0.98
PTCH1-203ENST00000375274 ANKRD29Q8N6D5 301 aa8.9□□□□□ -0.98
PTCH1-203ENST00000375274 Q9H8V8 135 aa8.9□□□□□ -0.98
PTCH1-203ENST00000375274 ABCA2Q9BZC7 2435 aa8.9□□□□□ -0.98
PTCH1-203ENST00000375274 KIAA1549Q9HCM3 1950 aa8.9□□□□□ -0.99
PTCH1-203ENST00000375274 J3QLI3 93 aa8.89□□□□□ -0.99
PTCH1-203ENST00000375274 IGHV4-61A0A0C4DH41 118 aa8.89□□□□□ -0.99
PTCH1-203ENST00000375274 DEFB112Q30KQ8 113 aa8.89□□□□□ -0.99
PTCH1-203ENST00000375274 ZNF80P51504 273 aaPredicted RBP8.89□□□□□ -0.99
PTCH1-203ENST00000375274 BAALCQ8WXS3 180 aa8.89□□□□□ -0.99
PTCH1-203ENST00000375274 C5orf56Q8N8D9 126 aa8.89□□□□□ -0.99
PTCH1-203ENST00000375274 MUSTN1Q8IVN3 82 aa8.88□□□□□ -0.99
PTCH1-203ENST00000375274 TP73-AS1Q9UF72 201 aa8.88□□□□□ -0.99
PTCH1-203ENST00000375274 U3KQE9 123 aa8.88□□□□□ -0.99
PTCH1-203ENST00000375274 HIVEP2P31629 2446 aa8.88□□□□□ -0.99
PTCH1-203ENST00000375274 DEFB1P60022 68 aa8.88□□□□□ -0.99
PTCH1-203ENST00000375274 SP5Q6BEB4 398 aaPredicted RBP8.88□□□□□ -0.99
PTCH1-203ENST00000375274 TOMM6Q96B49 74 aa8.88□□□□□ -0.99
PTCH1-203ENST00000375274 C11orf86A6NJI1 115 aa8.88□□□□□ -0.99
PTCH1-203ENST00000375274 IGHV4-38-2P0DP08 117 aa8.88□□□□□ -0.99
PTCH1-203ENST00000375274 HIVEP3Q5T1R4 2406 aa8.87□□□□□ -0.99
PTCH1-203ENST00000375274 PRSS47A8MTI9 375 aa8.87□□□□□ -0.99
PTCH1-203ENST00000375274 IGHG4P01861 327 aa8.87□□□□□ -0.99
PTCH1-203ENST00000375274 TIMM17AQ99595 171 aa8.87□□□□□ -0.99
PTCH1-203ENST00000375274 SPANXDQ9BXN6 97 aa8.87□□□□□ -0.99
PTCH1-203ENST00000375274 UBL5Q9BZL1 73 aa8.87□□□□□ -0.99
PTCH1-203ENST00000375274 B5MCH6 92 aa8.87□□□□□ -0.99
PTCH1-203ENST00000375274 G3V4G9 280 aa8.87□□□□□ -0.99
PTCH1-203ENST00000375274 ZFP36P26651 326 aaKnown RBP8.87□□□□□ -0.99
PTCH1-203ENST00000375274 NBL1P41271 181 aa8.86□□□□□ -0.99
PTCH1-203ENST00000375274 VPREB3Q9UKI3 123 aa8.86□□□□□ -0.99
PTCH1-203ENST00000375274 RNF114Q9Y508 228 aa8.86□□□□□ -0.99
PTCH1-203ENST00000375274 DAZAP2Q15038 168 aaPredicted RBP8.86□□□□□ -0.99
PTCH1-203ENST00000375274 Q8N1Y9 231 aa8.86□□□□□ -0.99
PTCH1-203ENST00000375274 LINC01620Q4KN68 170 aa8.86□□□□□ -0.99
PTCH1-203ENST00000375274 MED14OSP0DP75 135 aa8.86□□□□□ -0.99
PTCH1-203ENST00000375274 CRYBA4P53673 196 aa8.86□□□□□ -0.99
PTCH1-203ENST00000375274 FOXI1Q12951 378 aa8.86□□□□□ -0.99
PTCH1-203ENST00000375274 DEFB136Q30KP8 78 aa8.86□□□□□ -0.99
PTCH1-203ENST00000375274 C22orf34Q6ZV56 151 aa8.86□□□□□ -0.99
PTCH1-203ENST00000375274 IGLC6P0CF74 106 aa8.85□□□□□ -0.99
PTCH1-203ENST00000375274 BAALC-AS2P0C853 105 aa8.85□□□□□ -0.99
PTCH1-203ENST00000375274 F5H768 121 aa8.85□□□□□ -0.99
PTCH1-203ENST00000375274 Q96MF0 132 aa8.85□□□□□ -0.99
PTCH1-203ENST00000375274 DAD1P61803 113 aa8.84□□□□□ -0.99
PTCH1-203ENST00000375274 HAMPP81172 84 aa8.84□□□□□ -0.99
PTCH1-203ENST00000375274 UNQ9165/PRO28630Q6UXU0 137 aa8.84□□□□□ -0.99
PTCH1-203ENST00000375274 SLC25A29Q8N8R3 303 aa8.84□□□□□ -0.99
PTCH1-203ENST00000375274 NOP10Q9NPE3 64 aaKnown RBP8.84□□□□□ -0.99
PTCH1-203ENST00000375274 TINCRA0A1B0GVN0 87 aa8.83□□□□□ -1
PTCH1-203ENST00000375274 K7EMT4 169 aa8.83□□□□□ -1
PTCH1-203ENST00000375274 MYCNOSP40205 109 aa8.83□□□□□ -1
PTCH1-203ENST00000375274 ADORA2A-AS1P86434 159 aa8.83□□□□□ -1
PTCH1-203ENST00000375274 NUP210LQ5VU65 1888 aa8.83□□□□□ -1
PTCH1-203ENST00000375274 IGHV4-30-2A0A087WSY4 118 aa8.83□□□□□ -1
PTCH1-203ENST00000375274 HERV-K104P63124 156 aa8.83□□□□□ -1
PTCH1-203ENST00000375274 C10orf142B7Z368 130 aa8.83□□□□□ -1
PTCH1-203ENST00000375274 ZNF561-AS1K7EIQ3 104 aa8.83□□□□□ -1
PTCH1-203ENST00000375274 APRG1Q8IVJ8 170 aa8.83□□□□□ -1
PTCH1-203ENST00000375274 SIRPDQ9H106 197 aa8.83□□□□□ -1
PTCH1-203ENST00000375274 ICOSQ9Y6W8 199 aa8.83□□□□□ -1
PTCH1-203ENST00000375274 TLN2Q9Y4G6 2542 aa8.83□□□□□ -1
PTCH1-203ENST00000375274 CRLF1O75462 422 aa8.82□□□□□ -1
PTCH1-203ENST00000375274 FBXL19-AS1Q494R0 122 aa8.82□□□□□ -1
PTCH1-203ENST00000375274 PTH2Q96A98 100 aa8.82□□□□□ -1
PTCH1-203ENST00000375274 RS1O15537 224 aa8.82□□□□□ -1
PTCH1-203ENST00000375274 IGHG2P01859 326 aa8.82□□□□□ -1
PTCH1-203ENST00000375274 CRIP1P50238 77 aa8.82□□□□□ -1
PTCH1-203ENST00000375274 SLURP1P55000 103 aa8.82□□□□□ -1
PTCH1-203ENST00000375274 MUC22E2RYF6 1773 aaPredicted RBP8.81□□□□□ -1
PTCH1-203ENST00000375274 ANGP03950 147 aaKnown RBP8.81□□□□□ -1
PTCH1-203ENST00000375274 ACYP1P07311 99 aa8.81□□□□□ -1
PTCH1-203ENST00000375274 C5orf38Q86SI9 138 aa8.81□□□□□ -1
PTCH1-203ENST00000375274 Q8NA96 180 aa8.81□□□□□ -1
PTCH1-203ENST00000375274 A0A096LPF7 62 aa8.81□□□□□ -1
PTCH1-203ENST00000375274 GPHB5Q86YW7 130 aa8.81□□□□□ -1
PTCH1-203ENST00000375274 RNF152Q8N8N0 203 aa8.81□□□□□ -1
PTCH1-203ENST00000375274 C20orf203Q8NBC4 194 aa8.81□□□□□ -1
PTCH1-203ENST00000375274 CCDC140Q96MF4 163 aa8.81□□□□□ -1
PTCH1-203ENST00000375274 TRBV12-3P01733 135 aa8.81□□□□□ -1
PTCH1-203ENST00000375274 XCL1P47992 114 aa8.81□□□□□ -1
PTCH1-203ENST00000375274 CLPSL2Q6UWE3 100 aa8.81□□□□□ -1
PTCH1-203ENST00000375274 USP9XQ93008 2570 aaPredicted RBP8.81□□□□□ -1
PTCH1-203ENST00000375274 SETD2Q9BYW2 2564 aaPredicted RBP8.81□□□□□ -1
PTCH1-203ENST00000375274 CEP295Q9C0D2 2601 aa8.81□□□□□ -1
PTCH1-203ENST00000375274 CRYGBP07316 175 aa8.8□□□□□ -1
PTCH1-203ENST00000375274 DAND5Q8N907 189 aa8.8□□□□□ -1
PTCH1-203ENST00000375274 RPL32P62910 135 aaKnown RBP8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms