RNA–Protein interactions for RNA: ENST00000374673.3

HSPG2-201, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 3

Gene HSPG2, Length 538 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-201ENST00000374673 AP1S3Q96PC3 154 aa10.48□□□□□ -0.73
HSPG2-201ENST00000374673 PLECQ15149 4684 aaKnown RBP10.48□□□□□ -0.73
HSPG2-201ENST00000374673 TRBV6-4A0A1B0GX49 114 aa10.47□□□□□ -0.73
HSPG2-201ENST00000374673 HIGD1CA8MV81 97 aa10.47□□□□□ -0.73
HSPG2-201ENST00000374673 NTF3P20783 257 aa10.47□□□□□ -0.73
HSPG2-201ENST00000374673 FAM74A4Q5TZK3 123 aa10.47□□□□□ -0.73
HSPG2-201ENST00000374673 A0A087WWL8 130 aa10.46□□□□□ -0.73
HSPG2-201ENST00000374673 PPP1R2P9O14990 202 aa10.46□□□□□ -0.73
HSPG2-201ENST00000374673 NUDT3O95989 172 aa10.46□□□□□ -0.73
HSPG2-201ENST00000374673 TRGC1P0CF51 173 aa10.46□□□□□ -0.73
HSPG2-201ENST00000374673 SSTP61278 116 aa10.46□□□□□ -0.73
HSPG2-201ENST00000374673 C10orf91Q5T1B1 145 aa10.46□□□□□ -0.73
HSPG2-201ENST00000374673 SLC25A29Q8N8R3 303 aa10.46□□□□□ -0.73
HSPG2-201ENST00000374673 PGLYRP4Q96LB8 373 aa10.46□□□□□ -0.73
HSPG2-201ENST00000374673 MSRB1Q9NZV6 116 aa10.46□□□□□ -0.73
HSPG2-201ENST00000374673 KIF25-AS1Q9Y6Z4 181 aa10.46□□□□□ -0.73
HSPG2-201ENST00000374673 A0A096LPF7 62 aa10.45□□□□□ -0.74
HSPG2-201ENST00000374673 SMIM27A0A1W2PRY6 76 aa10.45□□□□□ -0.74
HSPG2-201ENST00000374673 RHOHQ15669 191 aa10.45□□□□□ -0.74
HSPG2-201ENST00000374673 RNF212Q495C1 297 aa10.45□□□□□ -0.74
HSPG2-201ENST00000374673 LGALS9CQ6DKI2 356 aa10.45□□□□□ -0.74
HSPG2-201ENST00000374673 C14orf178Q8N769 122 aaPredicted RBP10.45□□□□□ -0.74
HSPG2-201ENST00000374673 LINC00476Q8WZB0 136 aa10.45□□□□□ -0.74
HSPG2-201ENST00000374673 ANAPC16Q96DE5 110 aa10.45□□□□□ -0.74
HSPG2-201ENST00000374673 NAT8BQ9UHF3 227 aa10.45□□□□□ -0.74
HSPG2-201ENST00000374673 CARHSP1Q9Y2V2 147 aaKnown RBP10.45□□□□□ -0.74
HSPG2-201ENST00000374673 ICOSQ9Y6W8 199 aa10.45□□□□□ -0.74
HSPG2-201ENST00000374673 K7EQD1 137 aa10.44□□□□□ -0.74
HSPG2-201ENST00000374673 MT-ND4LP03901 98 aa10.44□□□□□ -0.74
HSPG2-201ENST00000374673 SMIM17P0DL12 118 aa10.44□□□□□ -0.74
HSPG2-201ENST00000374673 P0DMU3 169 aa10.44□□□□□ -0.74
HSPG2-201ENST00000374673 FAM231AP0DMU4 169 aa10.44□□□□□ -0.74
HSPG2-201ENST00000374673 FAM231CP0DMU5 169 aa10.44□□□□□ -0.74
HSPG2-201ENST00000374673 TWIST1Q15672 202 aa10.44□□□□□ -0.74
HSPG2-201ENST00000374673 Q6ZSN1 163 aa10.44□□□□□ -0.74
HSPG2-201ENST00000374673 NUP35Q8NFH5 326 aa10.44□□□□□ -0.74
HSPG2-201ENST00000374673 BORCS7Q96B45 105 aa10.44□□□□□ -0.74
HSPG2-201ENST00000374673 PRADC1Q9BSG0 188 aa10.44□□□□□ -0.74
HSPG2-201ENST00000374673 LCE6AA0A183 80 aa10.43□□□□□ -0.74
HSPG2-201ENST00000374673 A0A1B0GUT8 65 aa10.43□□□□□ -0.74
HSPG2-201ENST00000374673 GYPEP15421 78 aa10.43□□□□□ -0.74
HSPG2-201ENST00000374673 LINC00315P59091 139 aa10.43□□□□□ -0.74
HSPG2-201ENST00000374673 RAB4BP61018 213 aa10.43□□□□□ -0.74
HSPG2-201ENST00000374673 MRPL23Q16540 153 aaKnown RBP10.43□□□□□ -0.74
HSPG2-201ENST00000374673 DPH3P1Q9H4G8 78 aa10.43□□□□□ -0.74
HSPG2-201ENST00000374673 LOC100131303A0A0U1RQF7 123 aa10.42□□□□□ -0.74
HSPG2-201ENST00000374673 EVI2AP22794 236 aa10.42□□□□□ -0.74
HSPG2-201ENST00000374673 ZNF56Q15929 161 aa10.42□□□□□ -0.74
HSPG2-201ENST00000374673 SRIP30626 198 aa10.41□□□□□ -0.74
HSPG2-201ENST00000374673 TENM2Q9NT68 2774 aa10.41□□□□□ -0.74
HSPG2-201ENST00000374673 TRBV10-1A0A0K0K1A3 114 aa10.4□□□□□ -0.74
HSPG2-201ENST00000374673 LY6G6CO95867 125 aa10.4□□□□□ -0.74
HSPG2-201ENST00000374673 RIGQ13278 110 aa10.4□□□□□ -0.74
HSPG2-201ENST00000374673 SMIM15Q7Z3B0 74 aa10.4□□□□□ -0.74
HSPG2-201ENST00000374673 NEGR1Q7Z3B1 354 aa10.4□□□□□ -0.74
HSPG2-201ENST00000374673 SH2D6Q7Z4S9 175 aa10.4□□□□□ -0.74
HSPG2-201ENST00000374673 F5H697 171 aa10.39□□□□□ -0.75
HSPG2-201ENST00000374673 MGPP08493 103 aa10.39□□□□□ -0.75
HSPG2-201ENST00000374673 LINC00694P0DN24 101 aa10.39□□□□□ -0.75
HSPG2-201ENST00000374673 CCL18P55774 89 aa10.39□□□□□ -0.75
HSPG2-201ENST00000374673 CTDSP1Q9GZU7 261 aa10.39□□□□□ -0.75
HSPG2-201ENST00000374673 ALMS1Q8TCU4 4167 aa10.39□□□□□ -0.75
HSPG2-201ENST00000374673 LYSTQ99698 3801 aa10.39□□□□□ -0.75
HSPG2-201ENST00000374673 NDUFA5Q16718 116 aa10.38□□□□□ -0.75
HSPG2-201ENST00000374673 ESRGQ1W209 222 aa10.38□□□□□ -0.75
HSPG2-201ENST00000374673 UBE2DNLQ8IWF7 75 aa10.38□□□□□ -0.75
HSPG2-201ENST00000374673 CLRN3Q8NCR9 226 aa10.38□□□□□ -0.75
HSPG2-201ENST00000374673 TMEM191AQ9H0A3 160 aa10.38□□□□□ -0.75
HSPG2-201ENST00000374673 A0A1B0GW15 77 aa10.37□□□□□ -0.75
HSPG2-201ENST00000374673 GAGE12JA6NER3 117 aa10.37□□□□□ -0.75
HSPG2-201ENST00000374673 FAM3BP58499 235 aaPredicted RBP10.37□□□□□ -0.75
HSPG2-201ENST00000374673 GAGE1Q13065 139 aa10.37□□□□□ -0.75
HSPG2-201ENST00000374673 GAGE4Q13068 117 aa10.37□□□□□ -0.75
HSPG2-201ENST00000374673 GAGE5Q13069 117 aa10.37□□□□□ -0.75
HSPG2-201ENST00000374673 RHEBQ15382 184 aa10.37□□□□□ -0.75
HSPG2-201ENST00000374673 GAGE13Q4V321 117 aa10.37□□□□□ -0.75
HSPG2-201ENST00000374673 SUMO4Q6EEV6 95 aa10.37□□□□□ -0.75
HSPG2-201ENST00000374673 IMMP2LQ96T52 175 aa10.37□□□□□ -0.75
HSPG2-201ENST00000374673 Q9UF83 564 aa10.37□□□□□ -0.75
HSPG2-201ENST00000374673 LINC00588Q9Y4M8 146 aa10.37□□□□□ -0.75
HSPG2-201ENST00000374673 A0A087WWC5 75 aa10.36□□□□□ -0.75
HSPG2-201ENST00000374673 C7orf77A4D0Y5 90 aa10.36□□□□□ -0.75
HSPG2-201ENST00000374673 H7C1H1 209 aa10.36□□□□□ -0.75
HSPG2-201ENST00000374673 M0QY20 66 aa10.36□□□□□ -0.75
HSPG2-201ENST00000374673 APOC3P02656 99 aa10.36□□□□□ -0.75
HSPG2-201ENST00000374673 RPL36AP83881 106 aaKnown RBP10.36□□□□□ -0.75
HSPG2-201ENST00000374673 LYPD5Q6UWN5 251 aa10.36□□□□□ -0.75
HSPG2-201ENST00000374673 ATP5L2Q7Z4Y8 100 aa10.36□□□□□ -0.75
HSPG2-201ENST00000374673 SLC7A5P1Q8MH63 180 aa10.36□□□□□ -0.75
HSPG2-201ENST00000374673 NEXN-AS1Q8NBZ9 246 aa10.36□□□□□ -0.75
HSPG2-201ENST00000374673 RPL36ALQ969Q0 106 aaKnown RBP10.36□□□□□ -0.75
HSPG2-201ENST00000374673 TMEM242Q9NWH2 141 aa10.36□□□□□ -0.75
HSPG2-201ENST00000374673 TRBV7-3A0A075B6L6 115 aa10.35□□□□□ -0.75
HSPG2-201ENST00000374673 A0A1B0GXF2 115 aa10.35□□□□□ -0.75
HSPG2-201ENST00000374673 TIRAPP58753 221 aa10.35□□□□□ -0.75
HSPG2-201ENST00000374673 MRPL54Q6P161 138 aaKnown RBP10.35□□□□□ -0.75
HSPG2-201ENST00000374673 SVBPQ8N300 66 aa10.35□□□□□ -0.75
HSPG2-201ENST00000374673 ATP6V0E2Q8NHE4 81 aa10.35□□□□□ -0.75
HSPG2-201ENST00000374673 ZNRF2Q8NHG8 242 aa10.35□□□□□ -0.75
HSPG2-201ENST00000374673 FRZBQ92765 325 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms