RNA–Protein interactions for RNA: ENST00000372189.7

RAPGEF1-201, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,085 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-201ENST00000372189 PLA2G2AP14555 144 aa10.42□□□□□ -0.74
RAPGEF1-201ENST00000372189 C9orf66Q5T8R8 295 aa10.42□□□□□ -0.74
RAPGEF1-201ENST00000372189 SERP1Q9Y6X1 66 aa10.42□□□□□ -0.74
RAPGEF1-201ENST00000372189 RBX1P62877 108 aa10.42□□□□□ -0.74
RAPGEF1-201ENST00000372189 J3QQQ9 107 aa10.41□□□□□ -0.74
RAPGEF1-201ENST00000372189 CRYGCP07315 174 aa10.41□□□□□ -0.74
RAPGEF1-201ENST00000372189 IGLC6P0CF74 106 aa10.41□□□□□ -0.74
RAPGEF1-201ENST00000372189 MRPS36P82909 103 aaKnown RBP10.41□□□□□ -0.74
RAPGEF1-201ENST00000372189 KIAA2026Q5HYC2 2103 aa10.41□□□□□ -0.74
RAPGEF1-201ENST00000372189 OBSL1O75147 1896 aa10.41□□□□□ -0.74
RAPGEF1-201ENST00000372189 CCDC179H3BU77 68 aa10.41□□□□□ -0.74
RAPGEF1-201ENST00000372189 AKAP6Q13023 2319 aa10.41□□□□□ -0.74
RAPGEF1-201ENST00000372189 FGF23Q9GZV9 251 aaPredicted RBP10.4□□□□□ -0.74
RAPGEF1-201ENST00000372189 WISP2O76076 250 aa10.4□□□□□ -0.74
RAPGEF1-201ENST00000372189 NPBQ8NG41 125 aa10.4□□□□□ -0.74
RAPGEF1-201ENST00000372189 TRBV25-1A0A075B6N4 114 aa10.4□□□□□ -0.74
RAPGEF1-201ENST00000372189 ASPHD1Q5U4P2 390 aa10.4□□□□□ -0.74
RAPGEF1-201ENST00000372189 DEFB136Q30KP8 78 aa10.4□□□□□ -0.75
RAPGEF1-201ENST00000372189 ROS1P08922 2347 aa10.39□□□□□ -0.75
RAPGEF1-201ENST00000372189 PKDREJQ9NTG1 2253 aa10.39□□□□□ -0.75
RAPGEF1-201ENST00000372189 K7EMI3 77 aa10.39□□□□□ -0.75
RAPGEF1-201ENST00000372189 SPTBN1Q01082 2364 aaKnown RBP10.39□□□□□ -0.75
RAPGEF1-201ENST00000372189 IGHV3-16A0A0C4DH30 117 aa10.38□□□□□ -0.75
RAPGEF1-201ENST00000372189 FANCD2OSQ96PS1 177 aa10.38□□□□□ -0.75
RAPGEF1-201ENST00000372189 ESM1Q9NQ30 184 aa10.38□□□□□ -0.75
RAPGEF1-201ENST00000372189 ZNF843Q8N446 348 aa10.38□□□□□ -0.75
RAPGEF1-201ENST00000372189 SCRT2Q9NQ03 307 aa10.38□□□□□ -0.75
RAPGEF1-201ENST00000372189 ZFP36P26651 326 aaKnown RBP10.37□□□□□ -0.75
RAPGEF1-201ENST00000372189 TRAV23DV6A0A075B6W5 121 aa10.37□□□□□ -0.75
RAPGEF1-201ENST00000372189 DOCK7Q96N67 2140 aa10.37□□□□□ -0.75
RAPGEF1-201ENST00000372189 CXCL6P80162 114 aa10.37□□□□□ -0.75
RAPGEF1-201ENST00000372189 SLURP1P55000 103 aa10.37□□□□□ -0.75
RAPGEF1-201ENST00000372189 BLCAPP62952 87 aa10.37□□□□□ -0.75
RAPGEF1-201ENST00000372189 C19orf84I3L1E1 186 aa10.36□□□□□ -0.75
RAPGEF1-201ENST00000372189 PCP2Q8IVA1 136 aa10.36□□□□□ -0.75
RAPGEF1-201ENST00000372189 IGHV7-81A0A0B4J1V7 117 aa10.36□□□□□ -0.75
RAPGEF1-201ENST00000372189 RHOHQ15669 191 aa10.36□□□□□ -0.75
RAPGEF1-201ENST00000372189 ZNF491Q8N8L2 437 aa10.36□□□□□ -0.75
RAPGEF1-201ENST00000372189 ZGRF1Q86YA3 2104 aa10.36□□□□□ -0.75
RAPGEF1-201ENST00000372189 Q6ZSR3 168 aa10.36□□□□□ -0.75
RAPGEF1-201ENST00000372189 NREPQ16612 68 aa10.35□□□□□ -0.75
RAPGEF1-201ENST00000372189 LINC01620Q4KN68 170 aa10.35□□□□□ -0.75
RAPGEF1-201ENST00000372189 SERP2Q8N6R1 65 aa10.35□□□□□ -0.75
RAPGEF1-201ENST00000372189 PLA2G2EQ9NZK7 142 aa10.35□□□□□ -0.75
RAPGEF1-201ENST00000372189 F8WDY8 70 aa10.35□□□□□ -0.75
RAPGEF1-201ENST00000372189 RBAKDNA6NC62 111 aa10.35□□□□□ -0.75
RAPGEF1-201ENST00000372189 NUPR1O60356 82 aa10.35□□□□□ -0.75
RAPGEF1-201ENST00000372189 C5orf56Q8N8D9 126 aa10.34□□□□□ -0.75
RAPGEF1-201ENST00000372189 MRPL53Q96EL3 112 aaKnown RBP10.34□□□□□ -0.75
RAPGEF1-201ENST00000372189 UPK3BQ9BT76 320 aa10.34□□□□□ -0.75
RAPGEF1-201ENST00000372189 GP9P14770 177 aa10.34□□□□□ -0.75
RAPGEF1-201ENST00000372189 COX7CP15954 63 aa10.34□□□□□ -0.75
RAPGEF1-201ENST00000372189 TMEM131Q92545 1883 aa10.34□□□□□ -0.75
RAPGEF1-201ENST00000372189 NBASA2RRP1 2371 aa10.34□□□□□ -0.75
RAPGEF1-201ENST00000372189 TRBV10-2A0A0K0K1G8 114 aa10.33□□□□□ -0.76
RAPGEF1-201ENST00000372189 COX7A2LO14548 114 aa10.33□□□□□ -0.76
RAPGEF1-201ENST00000372189 IGHV3-38A0A0C4DH36 116 aa10.33□□□□□ -0.76
RAPGEF1-201ENST00000372189 H3BQ85 93 aa10.33□□□□□ -0.76
RAPGEF1-201ENST00000372189 C17orf77Q96MU5 243 aa10.33□□□□□ -0.76
RAPGEF1-201ENST00000372189 NDUFB1O75438 58 aa10.33□□□□□ -0.76
RAPGEF1-201ENST00000372189 RITA1Q96K30 269 aa10.33□□□□□ -0.76
RAPGEF1-201ENST00000372189 GTF3C1Q12789 2109 aa10.32□□□□□ -0.76
RAPGEF1-201ENST00000372189 CFHR4Q92496 578 aa10.32□□□□□ -0.76
RAPGEF1-201ENST00000372189 IGF2BP2-AS1Q96M15 143 aa10.32□□□□□ -0.76
RAPGEF1-201ENST00000372189 DYNAPQ8N1N2 210 aa10.32□□□□□ -0.76
RAPGEF1-201ENST00000372189 Q8N7P7 452 aa10.32□□□□□ -0.76
RAPGEF1-201ENST00000372189 RMI2Q96E14 147 aa10.32□□□□□ -0.76
RAPGEF1-201ENST00000372189 ZNF561-AS1K7EIQ3 104 aa10.32□□□□□ -0.76
RAPGEF1-201ENST00000372189 Q8N9W7 124 aa10.32□□□□□ -0.76
RAPGEF1-201ENST00000372189 TRAV4A0A0B4J268 109 aa10.32□□□□□ -0.76
RAPGEF1-201ENST00000372189 TDRG1Q3Y452 100 aa10.31□□□□□ -0.76
RAPGEF1-201ENST00000372189 AJUBAQ96IF1 538 aa10.31□□□□□ -0.76
RAPGEF1-201ENST00000372189 DOCK11Q5JSL3 2073 aa10.31□□□□□ -0.76
RAPGEF1-201ENST00000372189 KIAA1549LQ6ZVL6 1849 aa10.31□□□□□ -0.76
RAPGEF1-201ENST00000372189 LENEPQ9Y5L5 61 aa10.31□□□□□ -0.76
RAPGEF1-201ENST00000372189 JMJD7-PLA2G4BH0Y9G9 81 aa10.3□□□□□ -0.76
RAPGEF1-201ENST00000372189 APRG1Q8IVJ8 170 aa10.3□□□□□ -0.76
RAPGEF1-201ENST00000372189 MYCNOSP40205 109 aa10.29□□□□□ -0.76
RAPGEF1-201ENST00000372189 LINC00173Q6ZV60 143 aa10.29□□□□□ -0.76
RAPGEF1-201ENST00000372189 AGPAT4-IT1Q9H0P7 198 aa10.29□□□□□ -0.76
RAPGEF1-201ENST00000372189 NXPH4O95158 308 aa10.29□□□□□ -0.76
RAPGEF1-201ENST00000372189 NOP10Q9NPE3 64 aaKnown RBP10.29□□□□□ -0.76
RAPGEF1-201ENST00000372189 MSMPQ1L6U9 139 aa10.29□□□□□ -0.76
RAPGEF1-201ENST00000372189 ATP5EP2Q5VTU8 51 aa10.29□□□□□ -0.76
RAPGEF1-201ENST00000372189 DAND5Q8N907 189 aa10.29□□□□□ -0.76
RAPGEF1-201ENST00000372189 IGLV11-55A0A075B6I3 123 aa10.29□□□□□ -0.76
RAPGEF1-201ENST00000372189 IGHV4OR15-8A0A075B7B6 117 aa10.29□□□□□ -0.76
RAPGEF1-201ENST00000372189 A0A087WW49 117 aa10.29□□□□□ -0.76
RAPGEF1-201ENST00000372189 DENND4AQ7Z401 1863 aa10.29□□□□□ -0.76
RAPGEF1-201ENST00000372189 E9PLD3 99 aa10.28□□□□□ -0.76
RAPGEF1-201ENST00000372189 C4orf3Q8WVX3 66 aa10.28□□□□□ -0.76
RAPGEF1-201ENST00000372189 HIGD1BQ9P298 99 aa10.28□□□□□ -0.76
RAPGEF1-201ENST00000372189 DNAJC9-AS1A6NH13 148 aa10.28□□□□□ -0.76
RAPGEF1-201ENST00000372189 I3L2K1 104 aa10.28□□□□□ -0.76
RAPGEF1-201ENST00000372189 A0A096LPF7 62 aa10.28□□□□□ -0.76
RAPGEF1-201ENST00000372189 PIFOQ8TCI5 191 aa10.28□□□□□ -0.76
RAPGEF1-201ENST00000372189 ICOSQ9Y6W8 199 aa10.28□□□□□ -0.76
RAPGEF1-201ENST00000372189 GNRH2O43555 120 aa10.27□□□□□ -0.76
RAPGEF1-201ENST00000372189 PCNX1Q96RV3 2341 aa10.27□□□□□ -0.77
RAPGEF1-201ENST00000372189 C4orf48Q5BLP8 95 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 106.6 ms