RNA–Protein interactions for RNA: ENST00000370128.8

RTCA-203, Transcript of RNA 3'-terminal phosphate cyclase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTCA, Length 2,535 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTCA-203ENST00000370128 MRAPQ8TCY5 172 aa13.23□□□□□ -0.29
RTCA-203ENST00000370128 LGALS1P09382 135 aaKnown RBP13.22□□□□□ -0.29
RTCA-203ENST00000370128 SRSF2Q01130 221 aaKnown RBP13.22□□□□□ -0.29
RTCA-203ENST00000370128 KIR2DL5BQ8NHK3 375 aa13.22□□□□□ -0.29
RTCA-203ENST00000370128 IGHV3OR16-13A0A075B7E8 117 aa13.22□□□□□ -0.29
RTCA-203ENST00000370128 IGHV3-74A0A0B4J1X5 117 aa13.22□□□□□ -0.29
RTCA-203ENST00000370128 TRBV7-7A0A0K0K1E9 115 aa13.22□□□□□ -0.29
RTCA-203ENST00000370128 ORM1P02763 201 aa13.22□□□□□ -0.29
RTCA-203ENST00000370128 NDUFA11Q86Y39 141 aa13.22□□□□□ -0.29
RTCA-203ENST00000370128 ITPR1Q14643 2758 aa13.22□□□□□ -0.29
RTCA-203ENST00000370128 F8WDY8 70 aa13.21□□□□□ -0.29
RTCA-203ENST00000370128 EEF1AKMT3Q96AZ1 226 aa13.21□□□□□ -0.29
RTCA-203ENST00000370128 RBAKDNA6NC62 111 aa13.21□□□□□ -0.29
RTCA-203ENST00000370128 RPL13AP40429 203 aaKnown RBP13.21□□□□□ -0.29
RTCA-203ENST00000370128 SLC50A1Q9BRV3 221 aa13.21□□□□□ -0.29
RTCA-203ENST00000370128 SPANXCQ9NY87 97 aa13.21□□□□□ -0.29
RTCA-203ENST00000370128 MSRB1Q9NZV6 116 aa13.21□□□□□ -0.29
RTCA-203ENST00000370128 TRBV7-1A0A0A6YYK4 115 aa13.2□□□□□ -0.3
RTCA-203ENST00000370128 CNFNQ9BYD5 112 aa13.2□□□□□ -0.3
RTCA-203ENST00000370128 VPS13CQ709C8 3753 aa13.2□□□□□ -0.3
RTCA-203ENST00000370128 UQCRQO14949 82 aa13.2□□□□□ -0.3
RTCA-203ENST00000370128 IL17RELQ6ZVW7 336 aa13.2□□□□□ -0.3
RTCA-203ENST00000370128 ZNRF2Q8NHG8 242 aa13.2□□□□□ -0.3
RTCA-203ENST00000370128 KLK5Q9Y337 293 aaPredicted RBP13.2□□□□□ -0.3
RTCA-203ENST00000370128 IGHV3-49A0A0A0MS15 119 aa13.19□□□□□ -0.3
RTCA-203ENST00000370128 PLNP26678 52 aa13.19□□□□□ -0.3
RTCA-203ENST00000370128 LINC00526Q96FQ7 95 aa13.19□□□□□ -0.3
RTCA-203ENST00000370128 PRORYQ9H606 182 aa13.19□□□□□ -0.3
RTCA-203ENST00000370128 IGHV4-39P01824 125 aa13.19□□□□□ -0.3
RTCA-203ENST00000370128 CRIP2P52943 208 aaPredicted RBP13.19□□□□□ -0.3
RTCA-203ENST00000370128 IGHV3OR16-10A0A075B7F0 116 aa13.18□□□□□ -0.3
RTCA-203ENST00000370128 GNLYP22749 145 aa13.18□□□□□ -0.3
RTCA-203ENST00000370128 METTL26Q96S19 204 aa13.18□□□□□ -0.3
RTCA-203ENST00000370128 RNF185Q96GF1 192 aa13.18□□□□□ -0.3
RTCA-203ENST00000370128 AGPAT4-IT1Q9H0P7 198 aa13.18□□□□□ -0.3
RTCA-203ENST00000370128 LGALS9O00182 355 aa13.17□□□□□ -0.3
RTCA-203ENST00000370128 SRSF9Q13242 221 aaKnown RBP eCLIP13.17□□□□□ -0.3
RTCA-203ENST00000370128 LINC01600Q96MT4 127 aa13.17□□□□□ -0.3
RTCA-203ENST00000370128 NXT2Q9NPJ8 142 aaKnown RBP13.17□□□□□ -0.3
RTCA-203ENST00000370128 U3KQE9 123 aa13.17□□□□□ -0.3
RTCA-203ENST00000370128 FAM236AA0A1B0GUQ0 79 aa13.17□□□□□ -0.3
RTCA-203ENST00000370128 FAM236BA0A1B0GV22 79 aa13.17□□□□□ -0.3
RTCA-203ENST00000370128 C19orf54Q5BKX5 351 aa13.17□□□□□ -0.3
RTCA-203ENST00000370128 LINC00527Q9UJ94 153 aa13.17□□□□□ -0.3
RTCA-203ENST00000370128 MOB4Q9Y3A3 225 aa13.17□□□□□ -0.3
RTCA-203ENST00000370128 ABCA2Q9BZC7 2435 aa13.17□□□□□ -0.3
RTCA-203ENST00000370128 TEX49A0A1B0GTD5 131 aa13.16□□□□□ -0.3
RTCA-203ENST00000370128 POM121L12Q8N7R1 296 aa13.16□□□□□ -0.3
RTCA-203ENST00000370128 TRAV41A0A0B4J266 112 aa13.16□□□□□ -0.3
RTCA-203ENST00000370128 IGKV3D-20A0A0C4DH25 116 aa13.16□□□□□ -0.3
RTCA-203ENST00000370128 C11orf21Q9P2W6 132 aa13.16□□□□□ -0.3
RTCA-203ENST00000370128 CELSR1Q9NYQ6 3014 aa13.16□□□□□ -0.3
RTCA-203ENST00000370128 GAS8-AS1O95177 125 aa13.15□□□□□ -0.3
RTCA-203ENST00000370128 BRD3OSQ6XYD6 125 aa13.15□□□□□ -0.3
RTCA-203ENST00000370128 TRPT1Q86TN4 253 aaKnown RBP13.15□□□□□ -0.3
RTCA-203ENST00000370128 ZNF56Q15929 161 aa13.15□□□□□ -0.3
RTCA-203ENST00000370128 IGHV1-69DA0A0B4J2H0 117 aa13.14□□□□□ -0.31
RTCA-203ENST00000370128 IGHV1-69P01742 117 aa13.14□□□□□ -0.31
RTCA-203ENST00000370128 MRPL53Q96EL3 112 aaKnown RBP13.14□□□□□ -0.31
RTCA-203ENST00000370128 TRGV11A0A075B6L2 103 aa13.14□□□□□ -0.31
RTCA-203ENST00000370128 MYOZ3Q8TDC0 251 aa13.14□□□□□ -0.31
RTCA-203ENST00000370128 FAM223BA6NKX1 122 aa13.13□□□□□ -0.31
RTCA-203ENST00000370128 FAM223AQ8IWN6 122 aa13.13□□□□□ -0.31
RTCA-203ENST00000370128 PIMREGQ9BSJ6 248 aa13.13□□□□□ -0.31
RTCA-203ENST00000370128 SPANXDQ9BXN6 97 aa13.13□□□□□ -0.31
RTCA-203ENST00000370128 CFC1BP0CG36 223 aa13.13□□□□□ -0.31
RTCA-203ENST00000370128 CFC1P0CG37 223 aa13.13□□□□□ -0.31
RTCA-203ENST00000370128 IGHV4-61A0A0C4DH41 118 aa13.12□□□□□ -0.31
RTCA-203ENST00000370128 H3BMM0 161 aa13.12□□□□□ -0.31
RTCA-203ENST00000370128 PMVKQ15126 192 aa13.12□□□□□ -0.31
RTCA-203ENST00000370128 SCGB1D4Q6XE38 83 aa13.12□□□□□ -0.31
RTCA-203ENST00000370128 C9orf47Q6ZRZ4 202 aa13.12□□□□□ -0.31
RTCA-203ENST00000370128 UBE2WQ96B02 151 aa13.12□□□□□ -0.31
RTCA-203ENST00000370128 IMUPQ9GZP8 106 aa13.12□□□□□ -0.31
RTCA-203ENST00000370128 FAM240AA0A1B0GVK7 77 aa13.12□□□□□ -0.31
RTCA-203ENST00000370128 TRGV3P03979 118 aa13.12□□□□□ -0.31
RTCA-203ENST00000370128 DUX3Q96PT4 197 aa13.12□□□□□ -0.31
RTCA-203ENST00000370128 ZNF815PA8K554 130 aa13.11□□□□□ -0.31
RTCA-203ENST00000370128 PLEKHB2Q96CS7 222 aa13.11□□□□□ -0.31
RTCA-203ENST00000370128 F8VRH5 84 aa13.11□□□□□ -0.31
RTCA-203ENST00000370128 PRO1854Q9UHT4 67 aa13.11□□□□□ -0.31
RTCA-203ENST00000370128 TNFRSF6BO95407 300 aa13.1□□□□□ -0.31
RTCA-203ENST00000370128 GAGE2AQ6NT46 116 aa13.1□□□□□ -0.31
RTCA-203ENST00000370128 CEMP1Q6PRD7 247 aaPredicted RBP13.1□□□□□ -0.31
RTCA-203ENST00000370128 IGHV7-4-1A0A0J9YVY3 117 aa13.1□□□□□ -0.31
RTCA-203ENST00000370128 H7C1H1 209 aa13.1□□□□□ -0.31
RTCA-203ENST00000370128 TRBV12-3P01733 135 aa13.1□□□□□ -0.31
RTCA-203ENST00000370128 UNQ9165/PRO28630Q6UXU0 137 aa13.1□□□□□ -0.31
RTCA-203ENST00000370128 C16orf92Q96LL3 132 aa13.1□□□□□ -0.31
RTCA-203ENST00000370128 IGHV4-38-2P0DP08 117 aa13.09□□□□□ -0.31
RTCA-203ENST00000370128 GATA1P15976 413 aaPredicted RBP13.09□□□□□ -0.31
RTCA-203ENST00000370128 C4orf26Q17RF5 130 aa13.09□□□□□ -0.31
RTCA-203ENST00000370128 LINC01620Q4KN68 170 aa13.09□□□□□ -0.31
RTCA-203ENST00000370128 SPTAN1Q13813 2472 aaKnown RBP13.09□□□□□ -0.31
RTCA-203ENST00000370128 IGF1P05019 195 aa13.09□□□□□ -0.31
RTCA-203ENST00000370128 Q8N8P6 123 aa13.09□□□□□ -0.31
RTCA-203ENST00000370128 COL12A1Q99715 3063 aa13.08□□□□□ -0.31
RTCA-203ENST00000370128 C20orf173Q96LM9 149 aa13.08□□□□□ -0.32
RTCA-203ENST00000370128 TRAV12-1A0A0B4J245 112 aa13.08□□□□□ -0.32
RTCA-203ENST00000370128 HRCT1Q6UXD1 115 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms