RNA–Protein interactions for RNA: ENST00000369091.6

PRDM1-202, Transcript of PR/SET domain 1, humanhuman

TSL 1 (best) BASIC

Gene PRDM1, Length 2,612 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM1-202ENST00000369091 C20orf173Q96LM9 149 aa14.11□□□□□ -0.15
PRDM1-202ENST00000369091 IGHV1-69DA0A0B4J2H0 117 aa14.11□□□□□ -0.15
PRDM1-202ENST00000369091 JPT2Q9H910 190 aa14.11□□□□□ -0.15
PRDM1-202ENST00000369091 DPM3Q9P2X0 92 aa14.1□□□□□ -0.15
PRDM1-202ENST00000369091 PTPRZ1P23471 2315 aaPredicted RBP14.1□□□□□ -0.15
PRDM1-202ENST00000369091 ZNF883P0CG24 379 aa14.1□□□□□ -0.15
PRDM1-202ENST00000369091 MGAQ8IWI9 3026 aa14.09□□□□□ -0.15
PRDM1-202ENST00000369091 UBE2E1P51965 193 aa14.09□□□□□ -0.15
PRDM1-202ENST00000369091 LINC01600Q96MT4 127 aa14.09□□□□□ -0.15
PRDM1-202ENST00000369091 SPANXA1Q9NS26 97 aa14.09□□□□□ -0.15
PRDM1-202ENST00000369091 TRBV30A0A0K0K1B3 111 aa14.09□□□□□ -0.15
PRDM1-202ENST00000369091 OOSP1A8MZH6 123 aa14.09□□□□□ -0.15
PRDM1-202ENST00000369091 CSDC2Q9Y534 153 aaKnown RBP14.09□□□□□ -0.15
PRDM1-202ENST00000369091 TRAV16A0A0A6YYK6 109 aaPredicted RBP14.08□□□□□ -0.16
PRDM1-202ENST00000369091 LEPROTO15243 131 aa14.08□□□□□ -0.16
PRDM1-202ENST00000369091 CLEC19AQ6UXS0 136 aa14.08□□□□□ -0.16
PRDM1-202ENST00000369091 ZFAND2AQ8N6M9 145 aa14.08□□□□□ -0.16
PRDM1-202ENST00000369091 CNOT1A5YKK6 2376 aaKnown RBP14.08□□□□□ -0.16
PRDM1-202ENST00000369091 SVEP1Q4LDE5 3571 aa14.08□□□□□ -0.16
PRDM1-202ENST00000369091 TRGV11A0A075B6L2 103 aa14.08□□□□□ -0.16
PRDM1-202ENST00000369091 TMEM223A0PJW6 202 aa14.08□□□□□ -0.16
PRDM1-202ENST00000369091 TMEM141Q96I45 108 aa14.08□□□□□ -0.16
PRDM1-202ENST00000369091 C16orf92Q96LL3 132 aa14.08□□□□□ -0.16
PRDM1-202ENST00000369091 ICOSQ9Y6W8 199 aa14.08□□□□□ -0.16
PRDM1-202ENST00000369091 ECSCRQ19T08 205 aa14.07□□□□□ -0.16
PRDM1-202ENST00000369091 DEFB109BQ30KR1 87 aa14.07□□□□□ -0.16
PRDM1-202ENST00000369091 TRBV7-7A0A0K0K1E9 115 aa14.07□□□□□ -0.16
PRDM1-202ENST00000369091 NPC2P61916 151 aa14.07□□□□□ -0.16
PRDM1-202ENST00000369091 MRPL23Q16540 153 aaKnown RBP14.07□□□□□ -0.16
PRDM1-202ENST00000369091 TIMM17AQ99595 171 aa14.07□□□□□ -0.16
PRDM1-202ENST00000369091 M0R2P5 195 aa14.06□□□□□ -0.16
PRDM1-202ENST00000369091 KLK5Q9Y337 293 aaPredicted RBP14.06□□□□□ -0.16
PRDM1-202ENST00000369091 A0A087WWL8 130 aa14.06□□□□□ -0.16
PRDM1-202ENST00000369091 RNASE3P12724 160 aaKnown RBP14.06□□□□□ -0.16
PRDM1-202ENST00000369091 RNASE4P34096 147 aaKnown RBP14.06□□□□□ -0.16
PRDM1-202ENST00000369091 NRGNQ92686 78 aa14.06□□□□□ -0.16
PRDM1-202ENST00000369091 CACNA1BQ00975 2339 aa14.06□□□□□ -0.16
PRDM1-202ENST00000369091 PCNX1Q96RV3 2341 aa14.06□□□□□ -0.16
PRDM1-202ENST00000369091 MAP1BP46821 2468 aaKnown RBP14.05□□□□□ -0.16
PRDM1-202ENST00000369091 IGHV7-81A0A0B4J1V7 117 aa14.05□□□□□ -0.16
PRDM1-202ENST00000369091 A0A0J9YXY3 114 aa14.05□□□□□ -0.16
PRDM1-202ENST00000369091 E7EQL1 145 aa14.05□□□□□ -0.16
PRDM1-202ENST00000369091 CD3EP07766 207 aa14.05□□□□□ -0.16
PRDM1-202ENST00000369091 POLR2KP53803 58 aaKnown RBP14.05□□□□□ -0.16
PRDM1-202ENST00000369091 LINC00315P59091 139 aa14.05□□□□□ -0.16
PRDM1-202ENST00000369091 EBI3Q14213 229 aa14.05□□□□□ -0.16
PRDM1-202ENST00000369091 SUMO4Q6EEV6 95 aa14.05□□□□□ -0.16
PRDM1-202ENST00000369091 C9orf153Q5TBE3 101 aa14.05□□□□□ -0.16
PRDM1-202ENST00000369091 CCDC140Q96MF4 163 aa14.05□□□□□ -0.16
PRDM1-202ENST00000369091 TRAV21A0A0B4J279 112 aa14.04□□□□□ -0.16
PRDM1-202ENST00000369091 PRSS2P07478 247 aa14.04□□□□□ -0.16
PRDM1-202ENST00000369091 MRPL53Q96EL3 112 aaKnown RBP14.04□□□□□ -0.16
PRDM1-202ENST00000369091 ZNF256Q9Y2P7 627 aaPredicted RBP14.04□□□□□ -0.16
PRDM1-202ENST00000369091 MUC4Q99102 2169 aa14.04□□□□□ -0.16
PRDM1-202ENST00000369091 POM121L12Q8N7R1 296 aa14.04□□□□□ -0.16
PRDM1-202ENST00000369091 ABCA4P78363 2273 aa14.03□□□□□ -0.16
PRDM1-202ENST00000369091 SDHAF1A6NFY7 115 aa14.03□□□□□ -0.16
PRDM1-202ENST00000369091 H3BT86 120 aa14.03□□□□□ -0.16
PRDM1-202ENST00000369091 TMEM101Q96IK0 257 aa14.03□□□□□ -0.16
PRDM1-202ENST00000369091 KIF25-AS1Q9Y6Z4 181 aa14.03□□□□□ -0.16
PRDM1-202ENST00000369091 ZNF292O60281 2723 aa14.03□□□□□ -0.16
PRDM1-202ENST00000369091 F5H697 171 aa14.03□□□□□ -0.16
PRDM1-202ENST00000369091 PPP1R17O96001 155 aa14.03□□□□□ -0.16
PRDM1-202ENST00000369091 EEF1AKMT3Q96AZ1 226 aa14.03□□□□□ -0.16
PRDM1-202ENST00000369091 METTL26Q96S19 204 aa14.03□□□□□ -0.16
PRDM1-202ENST00000369091 A0A0J9YXV3 536 aa14.02□□□□□ -0.16
PRDM1-202ENST00000369091 DCHS2Q6V1P9 2916 aa14.02□□□□□ -0.16
PRDM1-202ENST00000369091 FAM240AA0A1B0GVK7 77 aa14.02□□□□□ -0.17
PRDM1-202ENST00000369091 DNAJC30Q96LL9 226 aa14.02□□□□□ -0.17
PRDM1-202ENST00000369091 F6UB75 175 aa14.01□□□□□ -0.17
PRDM1-202ENST00000369091 VCYO14598 125 aa14.01□□□□□ -0.17
PRDM1-202ENST00000369091 ADAMTSL4-AS1Q5T5F5 129 aa14.01□□□□□ -0.17
PRDM1-202ENST00000369091 NDUFA7O95182 113 aa14.01□□□□□ -0.17
PRDM1-202ENST00000369091 LITAFQ99732 161 aa14.01□□□□□ -0.17
PRDM1-202ENST00000369091 TRAV8-3A0A0A6YYJ7 113 aa14□□□□□ -0.17
PRDM1-202ENST00000369091 A0A0G2JNJ9 132 aa14□□□□□ -0.17
PRDM1-202ENST00000369091 CDX4O14627 284 aaPredicted RBP14□□□□□ -0.17
PRDM1-202ENST00000369091 SMCR5Q8TEV8 140 aa14□□□□□ -0.17
PRDM1-202ENST00000369091 Q9UFV3 132 aa14□□□□□ -0.17
PRDM1-202ENST00000369091 GVINP1Q7Z2Y8 2422 aa14□□□□□ -0.17
PRDM1-202ENST00000369091 VMO1Q7Z5L0 202 aa14□□□□□ -0.17
PRDM1-202ENST00000369091 ITLN2Q8WWU7 325 aaPredicted RBP14□□□□□ -0.17
PRDM1-202ENST00000369091 RELNP78509 3460 aa14□□□□□ -0.17
PRDM1-202ENST00000369091 HERVK_113P63121 156 aa13.99□□□□□ -0.17
PRDM1-202ENST00000369091 C3orf22Q8N5N4 141 aa13.99□□□□□ -0.17
PRDM1-202ENST00000369091 SPTBN2O15020 2390 aa13.99□□□□□ -0.17
PRDM1-202ENST00000369091 LY6HO94772 140 aa13.99□□□□□ -0.17
PRDM1-202ENST00000369091 DEFB121Q5J5C9 76 aa13.99□□□□□ -0.17
PRDM1-202ENST00000369091 LINC00527Q9UJ94 153 aa13.99□□□□□ -0.17
PRDM1-202ENST00000369091 IGHV4OR15-8A0A075B7B6 117 aa13.98□□□□□ -0.17
PRDM1-202ENST00000369091 A0A087WW49 117 aa13.98□□□□□ -0.17
PRDM1-202ENST00000369091 G3V318 75 aa13.98□□□□□ -0.17
PRDM1-202ENST00000369091 FAM74A4Q5TZK3 123 aa13.98□□□□□ -0.17
PRDM1-202ENST00000369091 I3L3M4 83 aa13.98□□□□□ -0.17
PRDM1-202ENST00000369091 LST1O00453 97 aa13.98□□□□□ -0.17
PRDM1-202ENST00000369091 NPFFO15130 113 aa13.98□□□□□ -0.17
PRDM1-202ENST00000369091 SPXQ9BT56 116 aa13.98□□□□□ -0.17
PRDM1-202ENST00000369091 ATMQ13315 3056 aa13.98□□□□□ -0.17
PRDM1-202ENST00000369091 LRBAP50851 2863 aa13.97□□□□□ -0.17
PRDM1-202ENST00000369091 OTOGLQ3ZCN5 2332 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms