RNA–Protein interactions for RNA: ENST00000368291.6

ECHDC1-203, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2 BASIC

Gene ECHDC1, Length 1,354 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-203ENST00000368291 BIN3Q9NQY0 253 aa15.36■□□□□ 0.05
ECHDC1-203ENST00000368291 RHODO00212 210 aa15.35■□□□□ 0.05
ECHDC1-203ENST00000368291 P01737 135 aa15.35■□□□□ 0.05
ECHDC1-203ENST00000368291 SRP19P09132 144 aaKnown RBP15.35■□□□□ 0.05
ECHDC1-203ENST00000368291 C14orf178Q8N769 122 aaPredicted RBP15.35■□□□□ 0.05
ECHDC1-203ENST00000368291 RPS20P60866 119 aaKnown RBP15.34■□□□□ 0.05
ECHDC1-203ENST00000368291 C1orf134Q5TEV5 83 aa15.34■□□□□ 0.05
ECHDC1-203ENST00000368291 SH2D6Q7Z4S9 175 aa15.34■□□□□ 0.05
ECHDC1-203ENST00000368291 SIVA1O15304 175 aa15.33■□□□□ 0.04
ECHDC1-203ENST00000368291 LINC00694P0DN24 101 aa15.33■□□□□ 0.04
ECHDC1-203ENST00000368291 CEBPGP53567 150 aa15.33■□□□□ 0.04
ECHDC1-203ENST00000368291 LINC00336Q6ZUF6 198 aa15.33■□□□□ 0.04
ECHDC1-203ENST00000368291 RNASE7Q9H1E1 156 aaKnown RBP15.33■□□□□ 0.04
ECHDC1-203ENST00000368291 TIRAPP58753 221 aa15.32■□□□□ 0.04
ECHDC1-203ENST00000368291 SPANXN1Q5VSR9 72 aa15.32■□□□□ 0.04
ECHDC1-203ENST00000368291 FER1L6-AS1Q8NA97 138 aa15.32■□□□□ 0.04
ECHDC1-203ENST00000368291 SSTP61278 116 aa15.31■□□□□ 0.04
ECHDC1-203ENST00000368291 WFDC10BQ8IUB3 73 aa15.31■□□□□ 0.04
ECHDC1-203ENST00000368291 HECTD4Q9Y4D8 3996 aa15.31■□□□□ 0.04
ECHDC1-203ENST00000368291 A0A1W2PPQ1 181 aa15.3■□□□□ 0.04
ECHDC1-203ENST00000368291 TTC32Q5I0X7 151 aa15.3■□□□□ 0.04
ECHDC1-203ENST00000368291 XKRY2A2RUG3 117 aa15.29■□□□□ 0.04
ECHDC1-203ENST00000368291 GAGE12JA6NER3 117 aa15.29■□□□□ 0.04
ECHDC1-203ENST00000368291 GAGE1Q13065 139 aa15.29■□□□□ 0.04
ECHDC1-203ENST00000368291 GAGE4Q13068 117 aa15.29■□□□□ 0.04
ECHDC1-203ENST00000368291 GAGE5Q13069 117 aa15.29■□□□□ 0.04
ECHDC1-203ENST00000368291 GAGE13Q4V321 117 aa15.29■□□□□ 0.04
ECHDC1-203ENST00000368291 C6orf223Q8N319 242 aa15.29■□□□□ 0.04
ECHDC1-203ENST00000368291 SMIM7Q9BQ49 75 aa15.29■□□□□ 0.04
ECHDC1-203ENST00000368291 LY96Q9Y6Y9 160 aa15.29■□□□□ 0.04
ECHDC1-203ENST00000368291 KIF25-AS1Q9Y6Z4 181 aa15.29■□□□□ 0.04
ECHDC1-203ENST00000368291 PRSS29PA6NIE9 313 aa15.28■□□□□ 0.04
ECHDC1-203ENST00000368291 C9JQL5 133 aa15.28■□□□□ 0.04
ECHDC1-203ENST00000368291 SRSF3P84103 164 aaKnown RBP15.28■□□□□ 0.04
ECHDC1-203ENST00000368291 ATP6V0E2Q8NHE4 81 aa15.28■□□□□ 0.04
ECHDC1-203ENST00000368291 TPPP3Q9BW30 176 aa15.28■□□□□ 0.04
ECHDC1-203ENST00000368291 RPP21Q9H633 154 aaKnown RBP15.28■□□□□ 0.04
ECHDC1-203ENST00000368291 MSRB1Q9NZV6 116 aa15.28■□□□□ 0.04
ECHDC1-203ENST00000368291 A0A1B0GVY2 172 aa15.27■□□□□ 0.04
ECHDC1-203ENST00000368291 LYZL1Q6UWQ5 148 aa15.27■□□□□ 0.04
ECHDC1-203ENST00000368291 BIRC6Q9NR09 4857 aa15.27■□□□□ 0.03
ECHDC1-203ENST00000368291 ZNF727A8MUV8 499 aa15.26■□□□□ 0.03
ECHDC1-203ENST00000368291 LINC00315P59091 139 aa15.26■□□□□ 0.03
ECHDC1-203ENST00000368291 SOHLH1Q5JUK2 328 aa15.26■□□□□ 0.03
ECHDC1-203ENST00000368291 FAM231DQ6ZW35 169 aa15.26■□□□□ 0.03
ECHDC1-203ENST00000368291 GTSF1LQ9H1H1 148 aa15.26■□□□□ 0.03
ECHDC1-203ENST00000368291 PKD1P98161 4303 aa15.26■□□□□ 0.03
ECHDC1-203ENST00000368291 F2Z2F3 143 aa15.25■□□□□ 0.03
ECHDC1-203ENST00000368291 RAB4BP61018 213 aa15.25■□□□□ 0.03
ECHDC1-203ENST00000368291 LINC01551Q86U37 167 aa15.25■□□□□ 0.03
ECHDC1-203ENST00000368291 DNAH10OSP0CZ25 163 aa15.24■□□□□ 0.03
ECHDC1-203ENST00000368291 CTRLP40313 264 aa15.24■□□□□ 0.03
ECHDC1-203ENST00000368291 CACNG7P62955 275 aa15.24■□□□□ 0.03
ECHDC1-203ENST00000368291 AP1S3Q96PC3 154 aa15.24■□□□□ 0.03
ECHDC1-203ENST00000368291 TRBV10-1A0A0K0K1A3 114 aa15.24■□□□□ 0.03
ECHDC1-203ENST00000368291 ZNF56Q15929 161 aa15.24■□□□□ 0.03
ECHDC1-203ENST00000368291 LELP1Q5T871 98 aa15.24■□□□□ 0.03
ECHDC1-203ENST00000368291 GTSF1Q8WW33 167 aa15.24■□□□□ 0.03
ECHDC1-203ENST00000368291 GATCO43716 136 aaKnown RBP15.23■□□□□ 0.03
ECHDC1-203ENST00000368291 CNFNQ9BYD5 112 aa15.23■□□□□ 0.03
ECHDC1-203ENST00000368291 NTF3P20783 257 aa15.22■□□□□ 0.03
ECHDC1-203ENST00000368291 WDR73Q6P4I2 378 aa15.22■□□□□ 0.03
ECHDC1-203ENST00000368291 BTF3P20290 206 aaKnown RBP15.21■□□□□ 0.02
ECHDC1-203ENST00000368291 ERVFC1-1P60608 527 aa15.21■□□□□ 0.02
ECHDC1-203ENST00000368291 TNP2Q05952 138 aa15.21■□□□□ 0.02
ECHDC1-203ENST00000368291 PEA15Q15121 130 aa15.21■□□□□ 0.02
ECHDC1-203ENST00000368291 NEXN-AS1Q8NBZ9 246 aa15.21■□□□□ 0.02
ECHDC1-203ENST00000368291 OR10G8Q8NGN5 311 aa15.21■□□□□ 0.02
ECHDC1-203ENST00000368291 SMDT1Q9H4I9 107 aa15.21■□□□□ 0.02
ECHDC1-203ENST00000368291 PKHD1P08F94 4074 aa15.21■□□□□ 0.02
ECHDC1-203ENST00000368291 TRBV7-3A0A075B6L6 115 aa15.2■□□□□ 0.02
ECHDC1-203ENST00000368291 IGHV3-38A0A0C4DH36 116 aa15.2■□□□□ 0.02
ECHDC1-203ENST00000368291 SMIM17P0DL12 118 aa15.2■□□□□ 0.02
ECHDC1-203ENST00000368291 EVI2AP22794 236 aa15.2■□□□□ 0.02
ECHDC1-203ENST00000368291 FAM74A3Q4VXF1 159 aa15.2■□□□□ 0.02
ECHDC1-203ENST00000368291 OR10J3Q5JRS4 329 aa15.2■□□□□ 0.02
ECHDC1-203ENST00000368291 TNFRSF18Q9Y5U5 241 aa15.2■□□□□ 0.02
ECHDC1-203ENST00000368291 TRAV8-6A0A0B4J262 113 aa15.19■□□□□ 0.02
ECHDC1-203ENST00000368291 F5H697 171 aa15.19■□□□□ 0.02
ECHDC1-203ENST00000368291 UBE2D3P61077 147 aa15.19■□□□□ 0.02
ECHDC1-203ENST00000368291 UBE2D2P62837 147 aa15.19■□□□□ 0.02
ECHDC1-203ENST00000368291 RPL36AP83881 106 aaKnown RBP15.19■□□□□ 0.02
ECHDC1-203ENST00000368291 CT83Q5H943 113 aa15.19■□□□□ 0.02
ECHDC1-203ENST00000368291 Q6ZRN7 208 aaPredicted RBP15.19■□□□□ 0.02
ECHDC1-203ENST00000368291 RPL36ALQ969Q0 106 aaKnown RBP15.19■□□□□ 0.02
ECHDC1-203ENST00000368291 A8MWL6 223 aa15.18■□□□□ 0.02
ECHDC1-203ENST00000368291 TMEM241Q24JQ0 296 aa15.18■□□□□ 0.02
ECHDC1-203ENST00000368291 LINC01556Q5JQF7 62 aa15.18■□□□□ 0.02
ECHDC1-203ENST00000368291 OSTCQ9NRP0 149 aa15.18■□□□□ 0.02
ECHDC1-203ENST00000368291 DNAH11Q96DT5 4516 aa15.17■□□□□ 0.02
ECHDC1-203ENST00000368291 K7EP13 123 aa15.17■□□□□ 0.02
ECHDC1-203ENST00000368291 RPL23P62829 140 aaKnown RBP15.17■□□□□ 0.02
ECHDC1-203ENST00000368291 ISOC2Q96AB3 205 aa15.17■□□□□ 0.02
ECHDC1-203ENST00000368291 TRAV9-2A0A087WT02 112 aa15.16■□□□□ 0.02
ECHDC1-203ENST00000368291 TRGC1P0CF51 173 aa15.16■□□□□ 0.02
ECHDC1-203ENST00000368291 FOXA3P55318 350 aaPredicted RBP15.16■□□□□ 0.02
ECHDC1-203ENST00000368291 IFITM2Q01629 132 aa15.16■□□□□ 0.02
ECHDC1-203ENST00000368291 M0QY20 66 aa15.15■□□□□ 0.02
ECHDC1-203ENST00000368291 MGPP08493 103 aa15.15■□□□□ 0.02
ECHDC1-203ENST00000368291 TWIST1Q15672 202 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 141.4 ms