RNA–Protein interactions for RNA: ENST00000366816.5

H3F3A-204, Transcript of H3 histone family member 3A, humanhuman

APPRIS P1 TSL 3 BASIC

Gene H3F3A, Length 799 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3A-204ENST00000366816 WFDC10BQ8IUB3 73 aa13.6□□□□□ -0.23
H3F3A-204ENST00000366816 GAGE12JA6NER3 117 aa13.59□□□□□ -0.23
H3F3A-204ENST00000366816 TMEM250H0YL14 139 aa13.59□□□□□ -0.23
H3F3A-204ENST00000366816 K7EN84 100 aa13.59□□□□□ -0.23
H3F3A-204ENST00000366816 P01737 135 aa13.59□□□□□ -0.23
H3F3A-204ENST00000366816 OR5AL1P0C617 328 aa13.59□□□□□ -0.23
H3F3A-204ENST00000366816 GAGE1Q13065 139 aa13.59□□□□□ -0.23
H3F3A-204ENST00000366816 GAGE4Q13068 117 aa13.59□□□□□ -0.23
H3F3A-204ENST00000366816 GAGE5Q13069 117 aa13.59□□□□□ -0.23
H3F3A-204ENST00000366816 GAGE13Q4V321 117 aa13.59□□□□□ -0.23
H3F3A-204ENST00000366816 SOHLH1Q5JUK2 328 aa13.59□□□□□ -0.23
H3F3A-204ENST00000366816 SPANXN1Q5VSR9 72 aa13.59□□□□□ -0.23
H3F3A-204ENST00000366816 C6orf223Q8N319 242 aa13.59□□□□□ -0.23
H3F3A-204ENST00000366816 NUDT10Q8NFP7 164 aa13.59□□□□□ -0.23
H3F3A-204ENST00000366816 NUDT11Q96G61 164 aa13.59□□□□□ -0.23
H3F3A-204ENST00000366816 FAM210AQ96ND0 272 aa13.59□□□□□ -0.23
H3F3A-204ENST00000366816 TPPP3Q9BW30 176 aa13.59□□□□□ -0.23
H3F3A-204ENST00000366816 RHODO00212 210 aa13.58□□□□□ -0.24
H3F3A-204ENST00000366816 TTC32Q5I0X7 151 aa13.58□□□□□ -0.24
H3F3A-204ENST00000366816 SH2D6Q7Z4S9 175 aa13.58□□□□□ -0.24
H3F3A-204ENST00000366816 RNASE7Q9H1E1 156 aaKnown RBP13.57□□□□□ -0.24
H3F3A-204ENST00000366816 BIN3Q9NQY0 253 aa13.57□□□□□ -0.24
H3F3A-204ENST00000366816 IGLC6P0CF74 106 aa13.56□□□□□ -0.24
H3F3A-204ENST00000366816 RPS20P60866 119 aaKnown RBP13.56□□□□□ -0.24
H3F3A-204ENST00000366816 FER1L6-AS1Q8NA97 138 aa13.56□□□□□ -0.24
H3F3A-204ENST00000366816 ATP6V0E2Q8NHE4 81 aa13.56□□□□□ -0.24
H3F3A-204ENST00000366816 HECTD4Q9Y4D8 3996 aa13.56□□□□□ -0.24
H3F3A-204ENST00000366816 A0A1B0GVY2 172 aa13.55□□□□□ -0.24
H3F3A-204ENST00000366816 A0A1W2PPQ1 181 aa13.55□□□□□ -0.24
H3F3A-204ENST00000366816 MSRB1Q9NZV6 116 aa13.55□□□□□ -0.24
H3F3A-204ENST00000366816 SRP19P09132 144 aaKnown RBP13.54□□□□□ -0.24
H3F3A-204ENST00000366816 TNFRSF18Q9Y5U5 241 aa13.54□□□□□ -0.24
H3F3A-204ENST00000366816 LY96Q9Y6Y9 160 aa13.54□□□□□ -0.24
H3F3A-204ENST00000366816 LINC00694P0DN24 101 aa13.53□□□□□ -0.24
H3F3A-204ENST00000366816 TIRAPP58753 221 aa13.53□□□□□ -0.24
H3F3A-204ENST00000366816 TNP2Q05952 138 aa13.53□□□□□ -0.24
H3F3A-204ENST00000366816 GTSF1LQ9H1H1 148 aa13.53□□□□□ -0.24
H3F3A-204ENST00000366816 XKRY2A2RUG3 117 aa13.52□□□□□ -0.25
H3F3A-204ENST00000366816 LINC00315P59091 139 aa13.52□□□□□ -0.25
H3F3A-204ENST00000366816 ZNF56Q15929 161 aa13.52□□□□□ -0.25
H3F3A-204ENST00000366816 OR10J3Q5JRS4 329 aa13.52□□□□□ -0.25
H3F3A-204ENST00000366816 LYZL1Q6UWQ5 148 aa13.52□□□□□ -0.25
H3F3A-204ENST00000366816 SMIM7Q9BQ49 75 aa13.52□□□□□ -0.25
H3F3A-204ENST00000366816 RPP21Q9H633 154 aaKnown RBP13.52□□□□□ -0.25
H3F3A-204ENST00000366816 SRSF3P84103 164 aaKnown RBP13.51□□□□□ -0.25
H3F3A-204ENST00000366816 KIF25-AS1Q9Y6Z4 181 aa13.51□□□□□ -0.25
H3F3A-204ENST00000366816 PKD1P98161 4303 aa13.5□□□□□ -0.25
H3F3A-204ENST00000366816 TRAV8-6A0A0B4J262 113 aa13.5□□□□□ -0.25
H3F3A-204ENST00000366816 ZNF727A8MUV8 499 aa13.5□□□□□ -0.25
H3F3A-204ENST00000366816 C9JQL5 133 aa13.5□□□□□ -0.25
H3F3A-204ENST00000366816 F5H697 171 aa13.5□□□□□ -0.25
H3F3A-204ENST00000366816 DNAH10OSP0CZ25 163 aa13.5□□□□□ -0.25
H3F3A-204ENST00000366816 RAB4BP61018 213 aa13.5□□□□□ -0.25
H3F3A-204ENST00000366816 LELP1Q5T871 98 aa13.5□□□□□ -0.25
H3F3A-204ENST00000366816 F2Z2F3 143 aa13.49□□□□□ -0.25
H3F3A-204ENST00000366816 EVI2AP22794 236 aa13.49□□□□□ -0.25
H3F3A-204ENST00000366816 AP1S3Q96PC3 154 aa13.49□□□□□ -0.25
H3F3A-204ENST00000366816 TRAV9-2A0A087WT02 112 aa13.48□□□□□ -0.25
H3F3A-204ENST00000366816 IGHV3-38A0A0C4DH36 116 aa13.48□□□□□ -0.25
H3F3A-204ENST00000366816 NDUFS6O75380 124 aaKnown RBP13.48□□□□□ -0.25
H3F3A-204ENST00000366816 SMIM17P0DL12 118 aa13.48□□□□□ -0.25
H3F3A-204ENST00000366816 NTF3P20783 257 aa13.48□□□□□ -0.25
H3F3A-204ENST00000366816 CACNG7P62955 275 aa13.48□□□□□ -0.25
H3F3A-204ENST00000366816 TRBV10-1A0A0K0K1A3 114 aa13.47□□□□□ -0.25
H3F3A-204ENST00000366816 GATCO43716 136 aaKnown RBP13.47□□□□□ -0.25
H3F3A-204ENST00000366816 ERVFC1-1P60608 527 aa13.47□□□□□ -0.25
H3F3A-204ENST00000366816 LINC01551Q86U37 167 aa13.47□□□□□ -0.25
H3F3A-204ENST00000366816 GTSF1Q8WW33 167 aa13.47□□□□□ -0.25
H3F3A-204ENST00000366816 IGHV3-30P01768 117 aa13.46□□□□□ -0.25
H3F3A-204ENST00000366816 IGHV3-33P01772 117 aa13.46□□□□□ -0.25
H3F3A-204ENST00000366816 MGPP08493 103 aa13.46□□□□□ -0.25
H3F3A-204ENST00000366816 IGHV3-30-3P0DP02 117 aa13.46□□□□□ -0.25
H3F3A-204ENST00000366816 IGHV3-30-5P0DP03 117 aa13.46□□□□□ -0.25
H3F3A-204ENST00000366816 CTRLP40313 264 aa13.46□□□□□ -0.25
H3F3A-204ENST00000366816 RPL36AP83881 106 aaKnown RBP13.46□□□□□ -0.25
H3F3A-204ENST00000366816 FAM231DQ6ZW35 169 aa13.46□□□□□ -0.25
H3F3A-204ENST00000366816 Q8N3U1 123 aa13.46□□□□□ -0.25
H3F3A-204ENST00000366816 NEXN-AS1Q8NBZ9 246 aa13.46□□□□□ -0.25
H3F3A-204ENST00000366816 RPL36ALQ969Q0 106 aaKnown RBP13.46□□□□□ -0.25
H3F3A-204ENST00000366816 TRBV7-3A0A075B6L6 115 aa13.45□□□□□ -0.26
H3F3A-204ENST00000366816 UBE2D3P61077 147 aa13.45□□□□□ -0.26
H3F3A-204ENST00000366816 UBE2D2P62837 147 aa13.45□□□□□ -0.26
H3F3A-204ENST00000366816 Q6ZRN7 208 aaPredicted RBP13.45□□□□□ -0.26
H3F3A-204ENST00000366816 PEA15Q15121 130 aa13.44□□□□□ -0.26
H3F3A-204ENST00000366816 TWIST1Q15672 202 aa13.44□□□□□ -0.26
H3F3A-204ENST00000366816 LINC01556Q5JQF7 62 aa13.44□□□□□ -0.26
H3F3A-204ENST00000366816 OR10G8Q8NGN5 311 aa13.44□□□□□ -0.26
H3F3A-204ENST00000366816 BTF3P20290 206 aaKnown RBP13.43□□□□□ -0.26
H3F3A-204ENST00000366816 PGLYRP4Q96LB8 373 aa13.43□□□□□ -0.26
H3F3A-204ENST00000366816 A0A087WWC5 75 aa13.42□□□□□ -0.26
H3F3A-204ENST00000366816 A8MWL6 223 aa13.42□□□□□ -0.26
H3F3A-204ENST00000366816 TMEM241Q24JQ0 296 aa13.42□□□□□ -0.26
H3F3A-204ENST00000366816 WDR73Q6P4I2 378 aa13.42□□□□□ -0.26
H3F3A-204ENST00000366816 DNAH11Q96DT5 4516 aa13.42□□□□□ -0.26
H3F3A-204ENST00000366816 K7EP13 123 aa13.41□□□□□ -0.26
H3F3A-204ENST00000366816 TRGC1P0CF51 173 aa13.41□□□□□ -0.26
H3F3A-204ENST00000366816 SUMO4Q6EEV6 95 aa13.41□□□□□ -0.26
H3F3A-204ENST00000366816 C10orf126Q8N4M7 172 aa13.41□□□□□ -0.26
H3F3A-204ENST00000366816 CNFNQ9BYD5 112 aa13.41□□□□□ -0.26
H3F3A-204ENST00000366816 PKHD1P08F94 4074 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms