RNA–Protein interactions for RNA: ENST00000366159.8

TNFRSF1A-202, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,339 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-202ENST00000366159 LAGE3Q14657 143 aa9.12□□□□□ -0.95
TNFRSF1A-202ENST00000366159 GAGE13Q4V321 117 aa9.12□□□□□ -0.95
TNFRSF1A-202ENST00000366159 Q8N3U1 123 aa9.12□□□□□ -0.95
TNFRSF1A-202ENST00000366159 SFT2D1Q8WV19 159 aa9.12□□□□□ -0.95
TNFRSF1A-202ENST00000366159 RHODO00212 210 aa9.11□□□□□ -0.95
TNFRSF1A-202ENST00000366159 IGHV3-30P01768 117 aa9.11□□□□□ -0.95
TNFRSF1A-202ENST00000366159 IGHV3-33P01772 117 aa9.11□□□□□ -0.95
TNFRSF1A-202ENST00000366159 IGHV3-30-3P0DP02 117 aa9.11□□□□□ -0.95
TNFRSF1A-202ENST00000366159 IGHV3-30-5P0DP03 117 aa9.11□□□□□ -0.95
TNFRSF1A-202ENST00000366159 AKR1C3P42330 323 aa9.11□□□□□ -0.95
TNFRSF1A-202ENST00000366159 SYT8Q8NBV8 401 aa9.11□□□□□ -0.95
TNFRSF1A-202ENST00000366159 FAM213BQ8TBF2 198 aa9.11□□□□□ -0.95
TNFRSF1A-202ENST00000366159 S100A9P06702 114 aaKnown RBP9.1□□□□□ -0.95
TNFRSF1A-202ENST00000366159 ZNF471Q9BX82 626 aaPredicted RBP9.1□□□□□ -0.95
TNFRSF1A-202ENST00000366159 PHLDA3Q9Y5J5 127 aa9.1□□□□□ -0.95
TNFRSF1A-202ENST00000366159 A0A087WWL8 130 aa9.09□□□□□ -0.95
TNFRSF1A-202ENST00000366159 TMSB15BA0A087X1C1 80 aa9.09□□□□□ -0.95
TNFRSF1A-202ENST00000366159 SCO2A0A1W2PP80 73 aa9.09□□□□□ -0.95
TNFRSF1A-202ENST00000366159 KANTRA0A1W2PQU2 76 aa9.09□□□□□ -0.95
TNFRSF1A-202ENST00000366159 CXCL1P09341 107 aa9.09□□□□□ -0.95
TNFRSF1A-202ENST00000366159 H2AFB1P0C5Y9 115 aa9.09□□□□□ -0.95
TNFRSF1A-202ENST00000366159 TPT1P13693 172 aaKnown RBP9.09□□□□□ -0.95
TNFRSF1A-202ENST00000366159 GCSHP23434 173 aa9.09□□□□□ -0.95
TNFRSF1A-202ENST00000366159 Q8N814 137 aa9.09□□□□□ -0.95
TNFRSF1A-202ENST00000366159 NTN5Q8WTR8 489 aaPredicted RBP9.09□□□□□ -0.95
TNFRSF1A-202ENST00000366159 Q9HAA7 133 aa9.09□□□□□ -0.95
TNFRSF1A-202ENST00000366159 A0A087WWC5 75 aa9.08□□□□□ -0.96
TNFRSF1A-202ENST00000366159 PSCAO43653 123 aa9.08□□□□□ -0.96
TNFRSF1A-202ENST00000366159 FAM74A4Q5TZK3 123 aa9.08□□□□□ -0.96
TNFRSF1A-202ENST00000366159 TMUB2Q71RG4 321 aa9.08□□□□□ -0.96
TNFRSF1A-202ENST00000366159 ZFP82Q8N141 532 aa9.08□□□□□ -0.96
TNFRSF1A-202ENST00000366159 SSBP4Q9BWG4 385 aaPredicted RBP9.08□□□□□ -0.96
TNFRSF1A-202ENST00000366159 HERC1Q15751 4861 aa9.08□□□□□ -0.96
TNFRSF1A-202ENST00000366159 SRRM2Q9UQ35 2752 aaKnown RBP9.08□□□□□ -0.96
TNFRSF1A-202ENST00000366159 TRBV10-1A0A0K0K1A3 114 aa9.07□□□□□ -0.96
TNFRSF1A-202ENST00000366159 A0A1B0GV50 99 aa9.07□□□□□ -0.96
TNFRSF1A-202ENST00000366159 M0R381 172 aa9.07□□□□□ -0.96
TNFRSF1A-202ENST00000366159 SNAI2O43623 268 aa9.07□□□□□ -0.96
TNFRSF1A-202ENST00000366159 CCL20P78556 96 aa9.07□□□□□ -0.96
TNFRSF1A-202ENST00000366159 RPL19P84098 196 aaKnown RBP9.07□□□□□ -0.96
TNFRSF1A-202ENST00000366159 DAZ4Q86SG3 579 aaKnown RBP9.07□□□□□ -0.96
TNFRSF1A-202ENST00000366159 BAGE2Q86Y30 109 aa9.07□□□□□ -0.96
TNFRSF1A-202ENST00000366159 DAZ3Q9NR90 486 aaKnown RBP9.07□□□□□ -0.96
TNFRSF1A-202ENST00000366159 TRAV1-1A0A0B4J248 108 aa9.06□□□□□ -0.96
TNFRSF1A-202ENST00000366159 EIF5AP63241 154 aaKnown RBP9.06□□□□□ -0.96
TNFRSF1A-202ENST00000366159 WFDC2Q14508 124 aa9.06□□□□□ -0.96
TNFRSF1A-202ENST00000366159 NIT1Q86X76 327 aa9.06□□□□□ -0.96
TNFRSF1A-202ENST00000366159 OR10G8Q8NGN5 311 aa9.06□□□□□ -0.96
TNFRSF1A-202ENST00000366159 IGLV5-52A0A0A0MRZ9 124 aa9.05□□□□□ -0.96
TNFRSF1A-202ENST00000366159 TRAV8-3A0A0A6YYJ7 113 aa9.05□□□□□ -0.96
TNFRSF1A-202ENST00000366159 EPM2AB3EWF7 344 aa9.05□□□□□ -0.96
TNFRSF1A-202ENST00000366159 PFDN1O60925 122 aa9.05□□□□□ -0.96
TNFRSF1A-202ENST00000366159 UBE2D3P61077 147 aa9.05□□□□□ -0.96
TNFRSF1A-202ENST00000366159 UBE2D2P62837 147 aa9.05□□□□□ -0.96
TNFRSF1A-202ENST00000366159 PRR27Q6MZM9 219 aa9.05□□□□□ -0.96
TNFRSF1A-202ENST00000366159 OR10AG1Q8NH19 301 aa9.05□□□□□ -0.96
TNFRSF1A-202ENST00000366159 C11orf52Q96A22 123 aa9.05□□□□□ -0.96
TNFRSF1A-202ENST00000366159 TM2D2Q9BX73 214 aa9.05□□□□□ -0.96
TNFRSF1A-202ENST00000366159 TRBV7-3A0A075B6L6 115 aa9.05□□□□□ -0.96
TNFRSF1A-202ENST00000366159 IGLV2-8P01709 118 aa9.05□□□□□ -0.96
TNFRSF1A-202ENST00000366159 OR5AL1P0C617 328 aa9.05□□□□□ -0.96
TNFRSF1A-202ENST00000366159 RPL35P42766 123 aaKnown RBP9.05□□□□□ -0.96
TNFRSF1A-202ENST00000366159 RAB4BP61018 213 aa9.05□□□□□ -0.96
TNFRSF1A-202ENST00000366159 TMEM70Q9BUB7 260 aa9.05□□□□□ -0.96
TNFRSF1A-202ENST00000366159 KIF25-AS1Q9Y6Z4 181 aa9.05□□□□□ -0.96
TNFRSF1A-202ENST00000366159 MYCBP2O75592 4640 aa9.04□□□□□ -0.96
TNFRSF1A-202ENST00000366159 TOR2AQ5JU69 321 aa9.04□□□□□ -0.96
TNFRSF1A-202ENST00000366159 CHCHD7Q9BUK0 85 aa9.04□□□□□ -0.96
TNFRSF1A-202ENST00000366159 DERL1Q9BUN8 251 aa9.04□□□□□ -0.96
TNFRSF1A-202ENST00000366159 MANBALQ9NQG1 85 aa9.04□□□□□ -0.96
TNFRSF1A-202ENST00000366159 RAB5CP51148 216 aa9.03□□□□□ -0.96
TNFRSF1A-202ENST00000366159 RPL36AP83881 106 aaKnown RBP9.03□□□□□ -0.96
TNFRSF1A-202ENST00000366159 NEXN-AS1Q8NBZ9 246 aa9.03□□□□□ -0.96
TNFRSF1A-202ENST00000366159 RPL36ALQ969Q0 106 aaKnown RBP9.03□□□□□ -0.96
TNFRSF1A-202ENST00000366159 DNAJC30Q96LL9 226 aa9.03□□□□□ -0.96
TNFRSF1A-202ENST00000366159 FAM30AQ9NZY2 134 aa9.03□□□□□ -0.96
TNFRSF1A-202ENST00000366159 C1QBP02746 253 aa9.02□□□□□ -0.97
TNFRSF1A-202ENST00000366159 SULT1A2P50226 295 aa9.02□□□□□ -0.97
TNFRSF1A-202ENST00000366159 Q5VSD8 79 aa9.02□□□□□ -0.97
TNFRSF1A-202ENST00000366159 ATRAIDQ6UW56 229 aa9.02□□□□□ -0.97
TNFRSF1A-202ENST00000366159 TCTE3Q8IZS6 198 aa9.02□□□□□ -0.97
TNFRSF1A-202ENST00000366159 GNG13Q9P2W3 67 aa9.02□□□□□ -0.97
TNFRSF1A-202ENST00000366159 MUC21A0A0G2JKD1 596 aa9.01□□□□□ -0.97
TNFRSF1A-202ENST00000366159 MUC21A0A140T8X8 626 aa9.01□□□□□ -0.97
TNFRSF1A-202ENST00000366159 C19orf71A6NCJ1 209 aa9.01□□□□□ -0.97
TNFRSF1A-202ENST00000366159 Q6ZSA8 131 aa9.01□□□□□ -0.97
TNFRSF1A-202ENST00000366159 KLK12Q9UKR0 248 aa9.01□□□□□ -0.97
TNFRSF1A-202ENST00000366159 COX11Q9Y6N1 276 aa9.01□□□□□ -0.97
TNFRSF1A-202ENST00000366159 TRBV6-8A0A0A6YYG3 113 aa9□□□□□ -0.97
TNFRSF1A-202ENST00000366159 SMR3BP02814 79 aaPredicted RBP9□□□□□ -0.97
TNFRSF1A-202ENST00000366159 IGLC6P0CF74 106 aa9□□□□□ -0.97
TNFRSF1A-202ENST00000366159 EIF5AL1Q6IS14 154 aaKnown RBP9□□□□□ -0.97
TNFRSF1A-202ENST00000366159 VAX2Q9UIW0 290 aa9□□□□□ -0.97
TNFRSF1A-202ENST00000366159 URGCP-MRPS24S4R325 110 aa9□□□□□ -0.97
TNFRSF1A-202ENST00000366159 TRBV20OR9-2A0A075B6H5 130 aa8.99□□□□□ -0.97
TNFRSF1A-202ENST00000366159 LCE2BO14633 110 aa8.99□□□□□ -0.97
TNFRSF1A-202ENST00000366159 LECT2O14960 151 aa8.99□□□□□ -0.97
TNFRSF1A-202ENST00000366159 HAMPP81172 84 aa8.99□□□□□ -0.97
TNFRSF1A-202ENST00000366159 ZNF56Q15929 161 aa8.99□□□□□ -0.97
TNFRSF1A-202ENST00000366159 CENPWQ5EE01 88 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 108.2 ms