RNA–Protein interactions for RNA: ENST00000364953.1

SNORD48-201, Transcript of small nucleolar RNA, C/D box 48, humanhuman

BASIC

Gene SNORD48, Length 64 nt, Biotype snoRNA, Subcellular localisation Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD48-201ENST00000364953 RPL39P62891 51 aaKnown RBP1.26□□□□□ -2.21
SNORD48-201ENST00000364953 MRPS36P82909 103 aaKnown RBP1.26□□□□□ -2.21
SNORD48-201ENST00000364953 PMVKQ15126 192 aa1.26□□□□□ -2.21
SNORD48-201ENST00000364953 VAMP3Q15836 100 aa1.26□□□□□ -2.21
SNORD48-201ENST00000364953 LY6EQ16553 131 aa1.26□□□□□ -2.21
SNORD48-201ENST00000364953 Q5PR19 223 aa1.26□□□□□ -2.21
SNORD48-201ENST00000364953 ADAMTSL4-AS1Q5T5F5 129 aa1.26□□□□□ -2.21
SNORD48-201ENST00000364953 SAMD5Q5TGI4 173 aa1.26□□□□□ -2.21
SNORD48-201ENST00000364953 SPANXN1Q5VSR9 72 aa1.26□□□□□ -2.21
SNORD48-201ENST00000364953 CLEC2AQ6UVW9 174 aa1.26□□□□□ -2.21
SNORD48-201ENST00000364953 SDIM1Q6ZPB5 146 aa1.26□□□□□ -2.21
SNORD48-201ENST00000364953 NTM-AS1Q6ZSK4 140 aa1.26□□□□□ -2.21
SNORD48-201ENST00000364953 NDUFA11Q86Y39 141 aa1.26□□□□□ -2.21
SNORD48-201ENST00000364953 C1orf158Q8N1D5 194 aa1.26□□□□□ -2.21
SNORD48-201ENST00000364953 TMEM263Q8WUH6 116 aaKnown RBP1.26□□□□□ -2.21
SNORD48-201ENST00000364953 NRGNQ92686 78 aa1.26□□□□□ -2.21
SNORD48-201ENST00000364953 RNF183Q96D59 192 aa1.26□□□□□ -2.21
SNORD48-201ENST00000364953 TMEM141Q96I45 108 aa1.26□□□□□ -2.21
SNORD48-201ENST00000364953 UBE2E2Q96LR5 201 aa1.26□□□□□ -2.21
SNORD48-201ENST00000364953 Q96MF0 132 aa1.26□□□□□ -2.21
SNORD48-201ENST00000364953 TPPP3Q9BW30 176 aa1.26□□□□□ -2.21
SNORD48-201ENST00000364953 DAZ1Q9NQZ3 744 aaKnown RBP1.26□□□□□ -2.21
SNORD48-201ENST00000364953 TMEM160Q9NX00 188 aa1.26□□□□□ -2.21
SNORD48-201ENST00000364953 UBE2D4Q9Y2X8 147 aa1.26□□□□□ -2.21
SNORD48-201ENST00000364953 CHTOPQ9Y3Y2 248 aaKnown RBP1.26□□□□□ -2.21
SNORD48-201ENST00000364953 SPCS1Q9Y6A9 102 aa1.26□□□□□ -2.21
SNORD48-201ENST00000364953 SELENOKQ9Y6D0 94 aa1.26□□□□□ -2.21
SNORD48-201ENST00000364953 DNAH3Q8TD57 4116 aa1.26□□□□□ -2.21
SNORD48-201ENST00000364953 EP300Q09472 2414 aaPredicted RBP1.26□□□□□ -2.21
SNORD48-201ENST00000364953 CELSR2Q9HCU4 2923 aa1.26□□□□□ -2.21
SNORD48-201ENST00000364953 DIDO1Q9BTC0 2240 aaKnown RBP1.25□□□□□ -2.21
SNORD48-201ENST00000364953 UBR5O95071 2799 aaPredicted RBP1.25□□□□□ -2.21
SNORD48-201ENST00000364953 ABCA2Q9BZC7 2435 aa1.25□□□□□ -2.21
SNORD48-201ENST00000364953 DNAH17Q9UFH2 4485 aa1.25□□□□□ -2.21
SNORD48-201ENST00000364953 APC2O95996 2303 aa1.25□□□□□ -2.21
SNORD48-201ENST00000364953 CNTRLQ7Z7A1 2325 aa1.25□□□□□ -2.21
SNORD48-201ENST00000364953 PLCE1Q9P212 2302 aa1.25□□□□□ -2.21
SNORD48-201ENST00000364953 HUWE1Q7Z6Z7 4374 aaKnown RBP1.25□□□□□ -2.21
SNORD48-201ENST00000364953 TRAV12-2A0A075B6T6 113 aa1.25□□□□□ -2.21
SNORD48-201ENST00000364953 A0A087WWL8 130 aa1.25□□□□□ -2.21
SNORD48-201ENST00000364953 TRAV12-3A0A0B4J271 114 aa1.25□□□□□ -2.21
SNORD48-201ENST00000364953 A0A0B4J2C4 111 aa1.25□□□□□ -2.21
SNORD48-201ENST00000364953 IGLV5-39A0A0G2JS06 123 aa1.25□□□□□ -2.21
SNORD48-201ENST00000364953 A0A0J9YXV3 536 aa1.25□□□□□ -2.21
SNORD48-201ENST00000364953 A0A0J9YXY3 114 aa1.25□□□□□ -2.21
SNORD48-201ENST00000364953 GAGE12HA6NDE8 117 aa1.25□□□□□ -2.21
SNORD48-201ENST00000364953 A6NDN8 102 aa1.25□□□□□ -2.21
SNORD48-201ENST00000364953 LINC01549A6NIU2 74 aa1.25□□□□□ -2.21
SNORD48-201ENST00000364953 B4DSR2 109 aa1.25□□□□□ -2.21
SNORD48-201ENST00000364953 TMEM238C9JI98 176 aa1.25□□□□□ -2.21
SNORD48-201ENST00000364953 F5H768 121 aa1.25□□□□□ -2.21
SNORD48-201ENST00000364953 H3BMG7 143 aa1.25□□□□□ -2.21
SNORD48-201ENST00000364953 J3QLI3 93 aa1.25□□□□□ -2.21
SNORD48-201ENST00000364953 RHODO00212 210 aa1.25□□□□□ -2.21
SNORD48-201ENST00000364953 LEPROTO15243 131 aa1.25□□□□□ -2.21
SNORD48-201ENST00000364953 RS1O15537 224 aa1.25□□□□□ -2.21
SNORD48-201ENST00000364953 TCL1BO95988 128 aa1.25□□□□□ -2.21
SNORD48-201ENST00000364953 PPP1R17O96001 155 aa1.25□□□□□ -2.21
SNORD48-201ENST00000364953 IGHV3-53P01767 116 aa1.25□□□□□ -2.21
SNORD48-201ENST00000364953 SRD5A1P18405 259 aa1.25□□□□□ -2.21
SNORD48-201ENST00000364953 AZU1P20160 251 aa1.25□□□□□ -2.21
SNORD48-201ENST00000364953 GCSHP23434 173 aa1.25□□□□□ -2.21
SNORD48-201ENST00000364953 HOXD3P31249 432 aaPredicted RBP1.25□□□□□ -2.21
SNORD48-201ENST00000364953 DSCR9P59020 149 aa1.25□□□□□ -2.21
SNORD48-201ENST00000364953 COX6A2Q02221 97 aa1.25□□□□□ -2.21
SNORD48-201ENST00000364953 FOXI1Q12951 378 aa1.25□□□□□ -2.21
SNORD48-201ENST00000364953 RHOHQ15669 191 aa1.25□□□□□ -2.21
SNORD48-201ENST00000364953 DEFB114Q30KQ6 69 aa1.25□□□□□ -2.21
SNORD48-201ENST00000364953 ODF3L2Q3SX64 289 aa1.25□□□□□ -2.21
SNORD48-201ENST00000364953 CD300EQ496F6 205 aaPredicted RBP1.25□□□□□ -2.21
SNORD48-201ENST00000364953 DEFB121Q5J5C9 76 aa1.25□□□□□ -2.21
SNORD48-201ENST00000364953 GTF2H5Q6ZYL4 71 aa1.25□□□□□ -2.21
SNORD48-201ENST00000364953 SH2D6Q7Z4S9 175 aa1.25□□□□□ -2.21
SNORD48-201ENST00000364953 TRPT1Q86TN4 253 aaKnown RBP1.25□□□□□ -2.21
SNORD48-201ENST00000364953 LRRC75A-AS1Q8N1F1 130 aa1.25□□□□□ -2.21
SNORD48-201ENST00000364953 LINC00612Q8N6U2 182 aa1.25□□□□□ -2.21
SNORD48-201ENST00000364953 LINC01356Q8N9X3 169 aa1.25□□□□□ -2.21
SNORD48-201ENST00000364953 CSNK1G2-AS1Q8NCQ2 148 aa1.25□□□□□ -2.21
SNORD48-201ENST00000364953 OR4C5Q8NGB2 326 aa1.25□□□□□ -2.21
SNORD48-201ENST00000364953 ATP6V0E2Q8NHE4 81 aa1.25□□□□□ -2.21
SNORD48-201ENST00000364953 WFDC12Q8WWY7 111 aa1.25□□□□□ -2.21
SNORD48-201ENST00000364953 RAB37Q96AX2 223 aa1.25□□□□□ -2.21
SNORD48-201ENST00000364953 ZNF479Q96JC4 524 aa1.25□□□□□ -2.21
SNORD48-201ENST00000364953 AP1S3Q96PC3 154 aa1.25□□□□□ -2.21
SNORD48-201ENST00000364953 SCGB3A1Q96QR1 104 aa1.25□□□□□ -2.21
SNORD48-201ENST00000364953 SIGMAR1Q99720 223 aa1.25□□□□□ -2.21
SNORD48-201ENST00000364953 PIMREGQ9BSJ6 248 aa1.25□□□□□ -2.21
SNORD48-201ENST00000364953 PPDPFQ9H3Y8 114 aa1.25□□□□□ -2.21
SNORD48-201ENST00000364953 MAP6D1Q9H9H5 199 aa1.25□□□□□ -2.21
SNORD48-201ENST00000364953 NHP2Q9NX24 153 aaKnown RBP1.25□□□□□ -2.21
SNORD48-201ENST00000364953 VPREB3Q9UKI3 123 aa1.25□□□□□ -2.21
SNORD48-201ENST00000364953 CYSLTR1Q9Y271 337 aa1.25□□□□□ -2.21
SNORD48-201ENST00000364953 TP53TG1Q9Y2A0 90 aa1.25□□□□□ -2.21
SNORD48-201ENST00000364953 UFC1Q9Y3C8 167 aa1.25□□□□□ -2.21
SNORD48-201ENST00000364953 PHLDA3Q9Y5J5 127 aa1.25□□□□□ -2.21
SNORD48-201ENST00000364953 KNTC1P50748 2209 aa1.25□□□□□ -2.21
SNORD48-201ENST00000364953 COL12A1Q99715 3063 aa1.25□□□□□ -2.21
SNORD48-201ENST00000364953 MUC6Q6W4X9 2439 aa1.25□□□□□ -2.21
SNORD48-201ENST00000364953 FAM186AA6NE01 2351 aa1.25□□□□□ -2.21
SNORD48-201ENST00000364953 CMYA5Q8N3K9 4069 aa1.25□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 1149.6 ms