RNA–Protein interactions for RNA: ENST00000363925.1

RNU4-1-201, Transcript of RNA, U4 small nuclear 1, humanhuman

BASIC

Gene RNU4-1, Length 141 nt, Biotype snRNA, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-1-201ENST00000363925 HSPG2P98160 4391 aa-0.45□□□□□ -2.48
RNU4-1-201ENST00000363925 PTPN13Q12923 2485 aa-0.45□□□□□ -2.48
RNU4-1-201ENST00000363925 XIRP1Q702N8 1843 aaKnown RBP-0.45□□□□□ -2.48
RNU4-1-201ENST00000363925 AKAP6Q13023 2319 aa-0.46□□□□□ -2.48
RNU4-1-201ENST00000363925 PLXNA1Q9UIW2 1896 aa-0.46□□□□□ -2.48
RNU4-1-201ENST00000363925 SPTBN2O15020 2390 aa-0.46□□□□□ -2.48
RNU4-1-201ENST00000363925 TSTD3H0UI37 97 aa-0.46□□□□□ -2.48
RNU4-1-201ENST00000363925 J3QLW9 94 aa-0.46□□□□□ -2.48
RNU4-1-201ENST00000363925 YPEL1O60688 119 aa-0.46□□□□□ -2.48
RNU4-1-201ENST00000363925 NPC2P61916 151 aa-0.46□□□□□ -2.48
RNU4-1-201ENST00000363925 CENPHQ9H3R5 247 aa-0.46□□□□□ -2.48
RNU4-1-201ENST00000363925 SSC5DA1L4H1 1573 aa-0.46□□□□□ -2.48
RNU4-1-201ENST00000363925 MYCBP2O75592 4640 aa-0.46□□□□□ -2.48
RNU4-1-201ENST00000363925 AKAP11Q9UKA4 1901 aa-0.46□□□□□ -2.48
RNU4-1-201ENST00000363925 ZNF142P52746 1687 aaPredicted RBP-0.46□□□□□ -2.48
RNU4-1-201ENST00000363925 ZNF815PA8K554 130 aa-0.47□□□□□ -2.48
RNU4-1-201ENST00000363925 TMEM14DPA8MWL7 114 aa-0.47□□□□□ -2.48
RNU4-1-201ENST00000363925 DEGS1O15121 323 aa-0.47□□□□□ -2.48
RNU4-1-201ENST00000363925 SPCS2Q15005 226 aa-0.47□□□□□ -2.48
RNU4-1-201ENST00000363925 KRTAP6-1Q3LI64 71 aa-0.47□□□□□ -2.48
RNU4-1-201ENST00000363925 SMIM15Q7Z3B0 74 aa-0.47□□□□□ -2.48
RNU4-1-201ENST00000363925 MAGOHBQ96A72 148 aaKnown RBP-0.47□□□□□ -2.48
RNU4-1-201ENST00000363925 SCP2D1Q9UJQ7 156 aa-0.47□□□□□ -2.48
RNU4-1-201ENST00000363925 KIAA0100Q14667 2235 aaKnown RBP-0.48□□□□□ -2.49
RNU4-1-201ENST00000363925 PKDREJQ9NTG1 2253 aa-0.48□□□□□ -2.49
RNU4-1-201ENST00000363925 TENM4Q6N022 2769 aa-0.48□□□□□ -2.49
RNU4-1-201ENST00000363925 A0A087WTM6 91 aa-0.48□□□□□ -2.49
RNU4-1-201ENST00000363925 TRGV1A0A0A0MS02 117 aa-0.48□□□□□ -2.49
RNU4-1-201ENST00000363925 SSBP3-AS1Q7Z2R9 100 aa-0.48□□□□□ -2.49
RNU4-1-201ENST00000363925 Q96NJ1 140 aa-0.48□□□□□ -2.49
RNU4-1-201ENST00000363925 SMPXQ9UHP9 88 aa-0.48□□□□□ -2.49
RNU4-1-201ENST00000363925 LPAP08519 4548 aa-0.48□□□□□ -2.49
RNU4-1-201ENST00000363925 ZNF292O60281 2723 aa-0.48□□□□□ -2.49
RNU4-1-201ENST00000363925 PARP14Q460N5 1801 aa-0.49□□□□□ -2.49
RNU4-1-201ENST00000363925 PHIPQ8WWQ0 1821 aa-0.49□□□□□ -2.49
RNU4-1-201ENST00000363925 TRAV12-3A0A0B4J271 114 aa-0.49□□□□□ -2.49
RNU4-1-201ENST00000363925 CCDC179H3BU77 68 aa-0.49□□□□□ -2.49
RNU4-1-201ENST00000363925 TCTE3Q8IZS6 198 aa-0.49□□□□□ -2.49
RNU4-1-201ENST00000363925 BATF3Q9NR55 127 aa-0.49□□□□□ -2.49
RNU4-1-201ENST00000363925 PRO0255Q9UI72 69 aa-0.49□□□□□ -2.49
RNU4-1-201ENST00000363925 LRP2P98164 4655 aa-0.49□□□□□ -2.49
RNU4-1-201ENST00000363925 TRAV36DV7A0A075B6V5 113 aa-0.5□□□□□ -2.49
RNU4-1-201ENST00000363925 TNFSF15O95150 251 aa-0.5□□□□□ -2.49
RNU4-1-201ENST00000363925 INSL4Q14641 139 aa-0.5□□□□□ -2.49
RNU4-1-201ENST00000363925 ATP11AUNQ6ZP68 121 aa-0.5□□□□□ -2.49
RNU4-1-201ENST00000363925 SELENOSQ9BQE4 189 aa-0.5□□□□□ -2.49
RNU4-1-201ENST00000363925 HSPB11Q9Y547 144 aa-0.5□□□□□ -2.49
RNU4-1-201ENST00000363925 A0A0D9SFI3 127 aa-0.51□□□□□ -2.49
RNU4-1-201ENST00000363925 UHRF1BP1LA0JNW5 1464 aa-0.51□□□□□ -2.49
RNU4-1-201ENST00000363925 M0R3E3 92 aa-0.51□□□□□ -2.49
RNU4-1-201ENST00000363925 NEFHP12036 1026 aa-0.51□□□□□ -2.49
RNU4-1-201ENST00000363925 RPS28P62857 69 aaKnown RBP-0.51□□□□□ -2.49
RNU4-1-201ENST00000363925 NRXN2Q9P2S2 1712 aa-0.51□□□□□ -2.49
RNU4-1-201ENST00000363925 ARFGEF1Q9Y6D6 1849 aa-0.51□□□□□ -2.49
RNU4-1-201ENST00000363925 CSMD3Q7Z407 3707 aa-0.51□□□□□ -2.49
RNU4-1-201ENST00000363925 MYH13Q9UKX3 1938 aa-0.52□□□□□ -2.49
RNU4-1-201ENST00000363925 PTPRMP28827 1452 aa-0.52□□□□□ -2.49
RNU4-1-201ENST00000363925 DEFB109BQ30KR1 87 aa-0.52□□□□□ -2.49
RNU4-1-201ENST00000363925 RPL7L1Q6DKI1 246 aaKnown RBP-0.52□□□□□ -2.49
RNU4-1-201ENST00000363925 DDA1Q9BW61 102 aa-0.52□□□□□ -2.49
RNU4-1-201ENST00000363925 CYP4F30PQ9H0H9 118 aa-0.52□□□□□ -2.49
RNU4-1-201ENST00000363925 HIGD1AQ9Y241 93 aa-0.52□□□□□ -2.49
RNU4-1-201ENST00000363925 LSM2Q9Y333 95 aaKnown RBP-0.52□□□□□ -2.49
RNU4-1-201ENST00000363925 GINS2Q9Y248 185 aa-0.53□□□□□ -2.49
RNU4-1-201ENST00000363925 FLNAP21333 2647 aaKnown RBP-0.54□□□□□ -2.5
RNU4-1-201ENST00000363925 FAM92AA1XBS5 289 aa-0.54□□□□□ -2.5
RNU4-1-201ENST00000363925 A6NIN4 97 aa-0.54□□□□□ -2.5
RNU4-1-201ENST00000363925 SMIM6P0DI80 62 aa-0.54□□□□□ -2.5
RNU4-1-201ENST00000363925 NDUFA12Q9UI09 145 aa-0.54□□□□□ -2.5
RNU4-1-201ENST00000363925 PLCE1Q9P212 2302 aa-0.54□□□□□ -2.5
RNU4-1-201ENST00000363925 NHSL1Q5SYE7 1610 aa-0.55□□□□□ -2.5
RNU4-1-201ENST00000363925 A0A1B0GX51 115 aa-0.55□□□□□ -2.5
RNU4-1-201ENST00000363925 M0R2P5 195 aa-0.55□□□□□ -2.5
RNU4-1-201ENST00000363925 EDDM3BP56851 147 aa-0.55□□□□□ -2.5
RNU4-1-201ENST00000363925 NCS1P62166 190 aa-0.55□□□□□ -2.5
RNU4-1-201ENST00000363925 WFDC2Q14508 124 aa-0.55□□□□□ -2.5
RNU4-1-201ENST00000363925 TRAV1-2A0A0B4J238 106 aa-0.56□□□□□ -2.5
RNU4-1-201ENST00000363925 TRAV22A0A0B4J277 110 aa-0.56□□□□□ -2.5
RNU4-1-201ENST00000363925 SCTP09683 121 aa-0.56□□□□□ -2.5
RNU4-1-201ENST00000363925 SPINK8P0C7L1 97 aa-0.56□□□□□ -2.5
RNU4-1-201ENST00000363925 CCDC153Q494R4 210 aa-0.56□□□□□ -2.5
RNU4-1-201ENST00000363925 CTAGE3PQ8IX95 158 aa-0.56□□□□□ -2.5
RNU4-1-201ENST00000363925 NPVFQ9HCQ7 196 aa-0.56□□□□□ -2.5
RNU4-1-201ENST00000363925 RPRMQ9NS64 109 aa-0.56□□□□□ -2.5
RNU4-1-201ENST00000363925 ERCC6Q03468 1493 aa-0.56□□□□□ -2.5
RNU4-1-201ENST00000363925 STAB1Q9NY15 2570 aa-0.56□□□□□ -2.5
RNU4-1-201ENST00000363925 C2CD3Q4AC94 2353 aa-0.57□□□□□ -2.5
RNU4-1-201ENST00000363925 SPANXN1Q5VSR9 72 aa-0.57□□□□□ -2.5
RNU4-1-201ENST00000363925 LINC01545Q5VT33 79 aa-0.57□□□□□ -2.5
RNU4-1-201ENST00000363925 CNFNQ9BYD5 112 aa-0.57□□□□□ -2.5
RNU4-1-201ENST00000363925 SPANXCQ9NY87 97 aa-0.57□□□□□ -2.5
RNU4-1-201ENST00000363925 GOLGA3Q08378 1498 aa-0.57□□□□□ -2.5
RNU4-1-201ENST00000363925 TRBV10-3A0A0K0K1G6 114 aa-0.58□□□□□ -2.5
RNU4-1-201ENST00000363925 M0R129 80 aa-0.58□□□□□ -2.5
RNU4-1-201ENST00000363925 MMGT1Q8N4V1 131 aa-0.58□□□□□ -2.5
RNU4-1-201ENST00000363925 CDK5RAP2Q96SN8 1893 aa-0.58□□□□□ -2.5
RNU4-1-201ENST00000363925 PKD1L1Q8TDX9 2849 aa-0.59□□□□□ -2.5
RNU4-1-201ENST00000363925 ZANQ9Y493 2812 aa-0.59□□□□□ -2.5
RNU4-1-201ENST00000363925 BIVM-ERCC5R4GMW8 1640 aa-0.59□□□□□ -2.5
RNU4-1-201ENST00000363925 LAMB1P07942 1786 aa-0.59□□□□□ -2.5
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms