RNA–Protein interactions for RNA: ENST00000362011.6

SHISA4-201, Transcript of shisa family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHISA4, Length 1,341 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA4-201ENST00000362011 HLA-DQA1P01909 254 aa14.74□□□□□ -0.05
SHISA4-201ENST00000362011 MT-ND6P03923 174 aa14.74□□□□□ -0.05
SHISA4-201ENST00000362011 RPS10P46783 165 aaKnown RBP14.74□□□□□ -0.05
SHISA4-201ENST00000362011 GAGE12BA1L429 117 aa14.73□□□□□ -0.05
SHISA4-201ENST00000362011 GAGE7O76087 117 aa14.73□□□□□ -0.05
SHISA4-201ENST00000362011 GAGE12FP0CL80 117 aa14.73□□□□□ -0.05
SHISA4-201ENST00000362011 GAGE12GP0CL81 117 aa14.73□□□□□ -0.05
SHISA4-201ENST00000362011 GAGE12IP0CL82 117 aa14.73□□□□□ -0.05
SHISA4-201ENST00000362011 EVI2AP22794 236 aa14.73□□□□□ -0.05
SHISA4-201ENST00000362011 C11orf68Q9H3H3 251 aaKnown RBP14.73□□□□□ -0.05
SHISA4-201ENST00000362011 DPH3P1Q9H4G8 78 aa14.73□□□□□ -0.05
SHISA4-201ENST00000362011 JPT2Q9H910 190 aa14.73□□□□□ -0.05
SHISA4-201ENST00000362011 SMIM17P0DL12 118 aa14.72□□□□□ -0.05
SHISA4-201ENST00000362011 FAM222AQ5U5X8 452 aa14.72□□□□□ -0.05
SHISA4-201ENST00000362011 C14orf178Q8N769 122 aaPredicted RBP14.72□□□□□ -0.05
SHISA4-201ENST00000362011 TRAPPC1Q9Y5R8 145 aa14.72□□□□□ -0.05
SHISA4-201ENST00000362011 DNAH7Q8WXX0 4024 aa14.71□□□□□ -0.05
SHISA4-201ENST00000362011 MRPL18Q9H0U6 180 aaKnown RBP14.71□□□□□ -0.05
SHISA4-201ENST00000362011 DKK2Q9UBU2 259 aa14.71□□□□□ -0.05
SHISA4-201ENST00000362011 TEX48A0A1B0GUV7 120 aa14.7□□□□□ -0.06
SHISA4-201ENST00000362011 RS1O15537 224 aa14.7□□□□□ -0.06
SHISA4-201ENST00000362011 FAM104BQ5XKR9 115 aa14.7□□□□□ -0.06
SHISA4-201ENST00000362011 LINC00612Q8N6U2 182 aa14.7□□□□□ -0.06
SHISA4-201ENST00000362011 FRZBQ92765 325 aa14.7□□□□□ -0.06
SHISA4-201ENST00000362011 TRGV2A0A075B6R0 118 aa14.69□□□□□ -0.06
SHISA4-201ENST00000362011 A0A087WWL8 130 aa14.69□□□□□ -0.06
SHISA4-201ENST00000362011 TRAV4A0A0B4J268 109 aa14.69□□□□□ -0.06
SHISA4-201ENST00000362011 MGPP08493 103 aa14.69□□□□□ -0.06
SHISA4-201ENST00000362011 SPART-AS1P0CW21 52 aa14.69□□□□□ -0.06
SHISA4-201ENST00000362011 CASC10Q5T4H9 136 aa14.69□□□□□ -0.06
SHISA4-201ENST00000362011 CFAP126Q5VTH2 177 aa14.69□□□□□ -0.06
SHISA4-201ENST00000362011 AMN1Q8IY45 258 aa14.69□□□□□ -0.06
SHISA4-201ENST00000362011 KIF25-AS1Q9Y6Z4 181 aa14.69□□□□□ -0.06
SHISA4-201ENST00000362011 EPPK1P58107 5090 aaKnown RBP14.69□□□□□ -0.06
SHISA4-201ENST00000362011 APCSP02743 223 aa14.68□□□□□ -0.06
SHISA4-201ENST00000362011 CRYGDP07320 174 aa14.68□□□□□ -0.06
SHISA4-201ENST00000362011 FAM74A4Q5TZK3 123 aa14.68□□□□□ -0.06
SHISA4-201ENST00000362011 OR4C5Q8NGB2 326 aa14.68□□□□□ -0.06
SHISA4-201ENST00000362011 SAMD10Q9BYL1 202 aa14.68□□□□□ -0.06
SHISA4-201ENST00000362011 CELA1Q9UNI1 258 aa14.68□□□□□ -0.06
SHISA4-201ENST00000362011 TENM2Q9NT68 2774 aa14.68□□□□□ -0.06
SHISA4-201ENST00000362011 RHODO00212 210 aa14.67□□□□□ -0.06
SHISA4-201ENST00000362011 DEFB130BP0DP73 79 aa14.67□□□□□ -0.06
SHISA4-201ENST00000362011 DEFB130AP0DP74 79 aa14.67□□□□□ -0.06
SHISA4-201ENST00000362011 RAB4AP20338 218 aa14.67□□□□□ -0.06
SHISA4-201ENST00000362011 FABP9Q0Z7S8 132 aa14.67□□□□□ -0.06
SHISA4-201ENST00000362011 SLAQ13239 276 aa14.67□□□□□ -0.06
SHISA4-201ENST00000362011 MUC7Q8TAX7 377 aa14.67□□□□□ -0.06
SHISA4-201ENST00000362011 RNF185Q96GF1 192 aa14.67□□□□□ -0.06
SHISA4-201ENST00000362011 BIRC6Q9NR09 4857 aa14.67□□□□□ -0.06
SHISA4-201ENST00000362011 A0A0J9YWU9 116 aa14.66□□□□□ -0.06
SHISA4-201ENST00000362011 DAD1P61803 113 aa14.66□□□□□ -0.06
SHISA4-201ENST00000362011 POM121L12Q8N7R1 296 aa14.66□□□□□ -0.06
SHISA4-201ENST00000362011 C18orf15Q96N68 181 aa14.66□□□□□ -0.06
SHISA4-201ENST00000362011 DNAH1Q9P2D7 4330 aa14.66□□□□□ -0.06
SHISA4-201ENST00000362011 CIDEAO60543 219 aa14.66□□□□□ -0.06
SHISA4-201ENST00000362011 TRGC2P03986 189 aa14.66□□□□□ -0.06
SHISA4-201ENST00000362011 ZNF56Q15929 161 aa14.66□□□□□ -0.06
SHISA4-201ENST00000362011 MRPL51Q4U2R6 128 aaKnown RBP14.66□□□□□ -0.06
SHISA4-201ENST00000362011 LINC00315P59091 139 aa14.65□□□□□ -0.06
SHISA4-201ENST00000362011 UFSP1Q6NVU6 142 aa14.65□□□□□ -0.06
SHISA4-201ENST00000362011 ZFP2Q6ZN57 461 aa14.65□□□□□ -0.06
SHISA4-201ENST00000362011 IGHV3-73A0A0B4J1V6 119 aa14.64□□□□□ -0.07
SHISA4-201ENST00000362011 F5H697 171 aa14.64□□□□□ -0.07
SHISA4-201ENST00000362011 IGHV3-53P01767 116 aa14.64□□□□□ -0.07
SHISA4-201ENST00000362011 KIAA1644Q3SXP7 199 aa14.64□□□□□ -0.07
SHISA4-201ENST00000362011 ZNF479Q96JC4 524 aa14.64□□□□□ -0.07
SHISA4-201ENST00000362011 MRAP2Q96G30 205 aa14.63□□□□□ -0.07
SHISA4-201ENST00000362011 SUMO4Q6EEV6 95 aa14.62□□□□□ -0.07
SHISA4-201ENST00000362011 PPBPP02775 128 aa14.61□□□□□ -0.07
SHISA4-201ENST00000362011 CKS2P33552 79 aa14.61□□□□□ -0.07
SHISA4-201ENST00000362011 TRAV26-2A0A0B4J265 109 aa14.6□□□□□ -0.07
SHISA4-201ENST00000362011 TRGV4A0A0C4DH28 118 aa14.6□□□□□ -0.07
SHISA4-201ENST00000362011 C1orf196B1AJZ1 125 aa14.6□□□□□ -0.07
SHISA4-201ENST00000362011 D6R8Y8 96 aa14.6□□□□□ -0.07
SHISA4-201ENST00000362011 ORMDL3Q8N138 153 aa14.6□□□□□ -0.07
SHISA4-201ENST00000362011 LYSTQ99698 3801 aa14.59□□□□□ -0.07
SHISA4-201ENST00000362011 LCE6AA0A183 80 aa14.59□□□□□ -0.07
SHISA4-201ENST00000362011 SMKR1H3BMG3 65 aa14.59□□□□□ -0.07
SHISA4-201ENST00000362011 PHOX2AO14813 284 aa14.59□□□□□ -0.07
SHISA4-201ENST00000362011 NCR2O95944 276 aa14.59□□□□□ -0.07
SHISA4-201ENST00000362011 ATP5G1P05496 136 aa14.59□□□□□ -0.07
SHISA4-201ENST00000362011 C11orf45Q8TAV5 145 aa14.59□□□□□ -0.07
SHISA4-201ENST00000362011 H7C1H1 209 aa14.58□□□□□ -0.08
SHISA4-201ENST00000362011 SRIP30626 198 aa14.58□□□□□ -0.08
SHISA4-201ENST00000362011 C12orf74Q32Q52 190 aa14.58□□□□□ -0.08
SHISA4-201ENST00000362011 PRELID3AQ96N28 172 aa14.58□□□□□ -0.08
SHISA4-201ENST00000362011 ALKBH7Q9BT30 221 aaPredicted RBP14.58□□□□□ -0.08
SHISA4-201ENST00000362011 FHL2Q14192 279 aa14.57□□□□□ -0.08
SHISA4-201ENST00000362011 Q6ZSN1 163 aa14.57□□□□□ -0.08
SHISA4-201ENST00000362011 EDA2RQ9HAV5 297 aa14.57□□□□□ -0.08
SHISA4-201ENST00000362011 GATA1P15976 413 aaPredicted RBP14.56□□□□□ -0.08
SHISA4-201ENST00000362011 LAMTOR2Q9Y2Q5 125 aa14.56□□□□□ -0.08
SHISA4-201ENST00000362011 STARD9Q9P2P6 4700 aa14.56□□□□□ -0.08
SHISA4-201ENST00000362011 K7EQD1 137 aa14.55□□□□□ -0.08
SHISA4-201ENST00000362011 M0QY20 66 aa14.55□□□□□ -0.08
SHISA4-201ENST00000362011 GAS8-AS1O95177 125 aa14.55□□□□□ -0.08
SHISA4-201ENST00000362011 PPP1R17O96001 155 aa14.55□□□□□ -0.08
SHISA4-201ENST00000362011 CSMD3Q7Z407 3707 aa14.54□□□□□ -0.08
SHISA4-201ENST00000362011 NPYP01303 97 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms