RNA–Protein interactions for RNA: ENST00000358544.6

VPS13B-203, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13B, Length 14,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-203ENST00000358544 PSMB8P28062 276 aa4.77□□□□□ -1.65
VPS13B-203ENST00000358544 FAM27E3Q08E93 113 aa4.77□□□□□ -1.65
VPS13B-203ENST00000358544 TOMM6Q96B49 74 aa4.77□□□□□ -1.65
VPS13B-203ENST00000358544 PRSS22Q9GZN4 317 aa4.77□□□□□ -1.65
VPS13B-203ENST00000358544 TNRC6BQ9UPQ9 1833 aaKnown RBP4.77□□□□□ -1.65
VPS13B-203ENST00000358544 KRTAP27-1Q3LI81 207 aa4.77□□□□□ -1.65
VPS13B-203ENST00000358544 A0A0U1RQV1 116 aa4.77□□□□□ -1.65
VPS13B-203ENST00000358544 CFAP126Q5VTH2 177 aa4.77□□□□□ -1.65
VPS13B-203ENST00000358544 A0A0C4DFX4 3053 aa4.77□□□□□ -1.65
VPS13B-203ENST00000358544 C17orf58Q2M2W7 97 aa4.77□□□□□ -1.65
VPS13B-203ENST00000358544 RBAKDNA6NC62 111 aa4.77□□□□□ -1.65
VPS13B-203ENST00000358544 INSL3P51460 131 aa4.77□□□□□ -1.65
VPS13B-203ENST00000358544 USMG5Q96IX5 58 aa4.77□□□□□ -1.65
VPS13B-203ENST00000358544 IMUPQ9GZP8 106 aa4.77□□□□□ -1.65
VPS13B-203ENST00000358544 LENEPQ9Y5L5 61 aa4.77□□□□□ -1.65
VPS13B-203ENST00000358544 KLHL30-AS1Q8NEE0 82 aa4.76□□□□□ -1.65
VPS13B-203ENST00000358544 ZNRD1Q9P1U0 126 aa4.76□□□□□ -1.65
VPS13B-203ENST00000358544 CD59P13987 128 aa4.76□□□□□ -1.65
VPS13B-203ENST00000358544 Q0VFX4 171 aa4.76□□□□□ -1.65
VPS13B-203ENST00000358544 TEX36Q5VZQ5 186 aa4.76□□□□□ -1.65
VPS13B-203ENST00000358544 IGHV1OR15-1A0A075B7D0 117 aa4.76□□□□□ -1.65
VPS13B-203ENST00000358544 P0DMU3 169 aa4.76□□□□□ -1.65
VPS13B-203ENST00000358544 FAM231AP0DMU4 169 aa4.76□□□□□ -1.65
VPS13B-203ENST00000358544 FAM231CP0DMU5 169 aa4.76□□□□□ -1.65
VPS13B-203ENST00000358544 EGR2P11161 476 aaPredicted RBP4.76□□□□□ -1.65
VPS13B-203ENST00000358544 HRCT1Q6UXD1 115 aa4.76□□□□□ -1.65
VPS13B-203ENST00000358544 MSRB2Q9Y3D2 182 aa4.76□□□□□ -1.65
VPS13B-203ENST00000358544 TRGV1A0A0A0MS02 117 aa4.76□□□□□ -1.65
VPS13B-203ENST00000358544 U3KQE9 123 aa4.76□□□□□ -1.65
VPS13B-203ENST00000358544 DSCR8Q96T75 97 aa4.76□□□□□ -1.65
VPS13B-203ENST00000358544 RNASE13Q5GAN3 156 aaKnown RBP4.76□□□□□ -1.65
VPS13B-203ENST00000358544 C17orf77Q96MU5 243 aa4.76□□□□□ -1.65
VPS13B-203ENST00000358544 BUB1B-PAK6H3BSN5 160 aa4.75□□□□□ -1.65
VPS13B-203ENST00000358544 C11orf86A6NJI1 115 aa4.75□□□□□ -1.65
VPS13B-203ENST00000358544 NXPH4O95158 308 aa4.75□□□□□ -1.65
VPS13B-203ENST00000358544 NDUFC1O43677 76 aa4.75□□□□□ -1.65
VPS13B-203ENST00000358544 FAM240AA0A1B0GVK7 77 aa4.75□□□□□ -1.65
VPS13B-203ENST00000358544 PLA2G5P39877 138 aa4.75□□□□□ -1.65
VPS13B-203ENST00000358544 TRAV4A0A0B4J268 109 aa4.75□□□□□ -1.65
VPS13B-203ENST00000358544 VPREB3Q9UKI3 123 aa4.75□□□□□ -1.65
VPS13B-203ENST00000358544 ATP5J2P56134 94 aa4.75□□□□□ -1.65
VPS13B-203ENST00000358544 PRR30Q53SZ7 412 aaPredicted RBP4.75□□□□□ -1.65
VPS13B-203ENST00000358544 KLK9Q9UKQ9 250 aa4.75□□□□□ -1.65
VPS13B-203ENST00000358544 U3KQK5 164 aa4.75□□□□□ -1.65
VPS13B-203ENST00000358544 IGKV1-17P01599 117 aa4.75□□□□□ -1.65
VPS13B-203ENST00000358544 C8orf31Q8N9H6 132 aa4.75□□□□□ -1.65
VPS13B-203ENST00000358544 RNASE6Q93091 150 aaKnown RBP4.75□□□□□ -1.65
VPS13B-203ENST00000358544 A0A0J9YXV3 536 aa4.74□□□□□ -1.65
VPS13B-203ENST00000358544 Q6ZSR3 168 aa4.74□□□□□ -1.65
VPS13B-203ENST00000358544 BAALCQ8WXS3 180 aa4.74□□□□□ -1.65
VPS13B-203ENST00000358544 ZFP2Q6ZN57 461 aa4.74□□□□□ -1.65
VPS13B-203ENST00000358544 RHPN1-AS1Q9BWJ2 59 aa4.74□□□□□ -1.65
VPS13B-203ENST00000358544 AGPAT4-IT1Q9H0P7 198 aa4.74□□□□□ -1.65
VPS13B-203ENST00000358544 CR1P17927 2039 aa4.74□□□□□ -1.65
VPS13B-203ENST00000358544 TIMM17AQ99595 171 aa4.74□□□□□ -1.65
VPS13B-203ENST00000358544 C14orf132Q9NPU4 83 aa4.74□□□□□ -1.65
VPS13B-203ENST00000358544 PKIGQ9Y2B9 76 aa4.74□□□□□ -1.65
VPS13B-203ENST00000358544 CENPVL3A0A0U1RRI6 287 aa4.74□□□□□ -1.65
VPS13B-203ENST00000358544 VMO1Q7Z5L0 202 aa4.74□□□□□ -1.65
VPS13B-203ENST00000358544 LINC00311Q8N616 119 aa4.74□□□□□ -1.65
VPS13B-203ENST00000358544 WDR90Q96KV7 1748 aa4.74□□□□□ -1.65
VPS13B-203ENST00000358544 IGKV2D-26A0A0A0MRZ7 120 aa4.74□□□□□ -1.65
VPS13B-203ENST00000358544 LYNX1G3V0Z9 82 aa4.74□□□□□ -1.65
VPS13B-203ENST00000358544 MRPS12O15235 138 aaKnown RBP4.74□□□□□ -1.65
VPS13B-203ENST00000358544 LYNX1P0DP58 116 aa4.74□□□□□ -1.65
VPS13B-203ENST00000358544 HOXD3P31249 432 aaPredicted RBP4.74□□□□□ -1.65
VPS13B-203ENST00000358544 NFE4Q86UQ8 179 aa4.74□□□□□ -1.65
VPS13B-203ENST00000358544 CRIPAKQ8N1N5 446 aa4.74□□□□□ -1.65
VPS13B-203ENST00000358544 DAND5Q8N907 189 aa4.74□□□□□ -1.65
VPS13B-203ENST00000358544 RPL39LQ96EH5 51 aaKnown RBP4.74□□□□□ -1.65
VPS13B-203ENST00000358544 LTBRP36941 435 aa4.74□□□□□ -1.65
VPS13B-203ENST00000358544 FOXE3Q13461 319 aa4.74□□□□□ -1.65
VPS13B-203ENST00000358544 MINOS1Q5TGZ0 78 aa4.74□□□□□ -1.65
VPS13B-203ENST00000358544 MINOS1-NBL1R4GNA1 71 aa4.74□□□□□ -1.65
VPS13B-203ENST00000358544 RNF152Q8N8N0 203 aa4.74□□□□□ -1.65
VPS13B-203ENST00000358544 LINC00694P0DN24 101 aa4.74□□□□□ -1.65
VPS13B-203ENST00000358544 SLC25A29Q8N8R3 303 aa4.74□□□□□ -1.65
VPS13B-203ENST00000358544 NDUFC2-KCTD14E9PQ53 114 aa4.74□□□□□ -1.65
VPS13B-203ENST00000358544 C6orf226Q5I0X4 101 aa4.74□□□□□ -1.65
VPS13B-203ENST00000358544 LTBP1Q14766 1721 aa4.74□□□□□ -1.65
VPS13B-203ENST00000358544 IGHV1-69DA0A0B4J2H0 117 aa4.73□□□□□ -1.65
VPS13B-203ENST00000358544 ZNF883P0CG24 379 aa4.73□□□□□ -1.65
VPS13B-203ENST00000358544 PFN2P35080 140 aa4.73□□□□□ -1.65
VPS13B-203ENST00000358544 SUMO4Q6EEV6 95 aa4.73□□□□□ -1.65
VPS13B-203ENST00000358544 Q6Q795 121 aa4.73□□□□□ -1.65
VPS13B-203ENST00000358544 LYRM9A8MSI8 78 aa4.73□□□□□ -1.65
VPS13B-203ENST00000358544 TMEM61Q8N0U2 210 aa4.73□□□□□ -1.65
VPS13B-203ENST00000358544 IGKV1OR2-108A0A075B7D4 117 aa4.73□□□□□ -1.65
VPS13B-203ENST00000358544 IGHV3-53P01767 116 aa4.73□□□□□ -1.65
VPS13B-203ENST00000358544 HTN3P15516 51 aa4.73□□□□□ -1.65
VPS13B-203ENST00000358544 LOXP28300 417 aaPredicted RBP4.73□□□□□ -1.65
VPS13B-203ENST00000358544 UPK3BQ9BT76 320 aa4.73□□□□□ -1.65
VPS13B-203ENST00000358544 SERP2Q8N6R1 65 aa4.73□□□□□ -1.65
VPS13B-203ENST00000358544 DAZ1Q9NQZ3 744 aaKnown RBP4.73□□□□□ -1.65
VPS13B-203ENST00000358544 IGHV3-16A0A0C4DH30 117 aa4.73□□□□□ -1.65
VPS13B-203ENST00000358544 IGLV2-14P01704 120 aa4.73□□□□□ -1.65
VPS13B-203ENST00000358544 UCNP55089 124 aa4.73□□□□□ -1.65
VPS13B-203ENST00000358544 LINC00526Q96FQ7 95 aa4.73□□□□□ -1.65
VPS13B-203ENST00000358544 TNS1Q9HBL0 1735 aaKnown RBP4.73□□□□□ -1.65
VPS13B-203ENST00000358544 MIAQ16674 131 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 133.3 ms