RNA–Protein interactions for RNA: ENST00000357348.9

RTFDC1-202, Transcript of Protein RTF2 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTFDC1, Length 2,212 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-202ENST00000357348 CFHR3Q02985 330 aa9.56□□□□□ -0.88
RTFDC1-202ENST00000357348 ATP5G2Q06055 141 aa9.56□□□□□ -0.88
RTFDC1-202ENST00000357348 C11orf44Q8N8P7 122 aa9.56□□□□□ -0.88
RTFDC1-202ENST00000357348 CCDC140Q96MF4 163 aa9.56□□□□□ -0.88
RTFDC1-202ENST00000357348 F8VRH5 84 aa9.56□□□□□ -0.88
RTFDC1-202ENST00000357348 TRBV12-3P01733 135 aa9.56□□□□□ -0.88
RTFDC1-202ENST00000357348 RNASE1P07998 156 aaKnown RBP9.56□□□□□ -0.88
RTFDC1-202ENST00000357348 MRAP2Q96G30 205 aa9.56□□□□□ -0.88
RTFDC1-202ENST00000357348 SPAG8Q99932 426 aaPredicted RBP9.56□□□□□ -0.88
RTFDC1-202ENST00000357348 TRAV8-2A0A0B4J237 113 aa9.55□□□□□ -0.88
RTFDC1-202ENST00000357348 CLPSL1A2RUU4 121 aa9.55□□□□□ -0.88
RTFDC1-202ENST00000357348 H7C1H1 209 aa9.55□□□□□ -0.88
RTFDC1-202ENST00000357348 IGLV1-40P01703 118 aa9.55□□□□□ -0.88
RTFDC1-202ENST00000357348 C9orf47Q6ZRZ4 202 aa9.55□□□□□ -0.88
RTFDC1-202ENST00000357348 EEF1AKMT3Q96AZ1 226 aa9.55□□□□□ -0.88
RTFDC1-202ENST00000357348 GTSF1LQ9H1H1 148 aa9.55□□□□□ -0.88
RTFDC1-202ENST00000357348 MYMXA0A1B0GTQ4 84 aa9.54□□□□□ -0.88
RTFDC1-202ENST00000357348 H3BMG7 143 aa9.54□□□□□ -0.88
RTFDC1-202ENST00000357348 PSMB8P28062 276 aa9.54□□□□□ -0.88
RTFDC1-202ENST00000357348 HIST1H4GQ99525 98 aa9.54□□□□□ -0.88
RTFDC1-202ENST00000357348 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.54□□□□□ -0.88
RTFDC1-202ENST00000357348 K7EMI3 77 aa9.54□□□□□ -0.88
RTFDC1-202ENST00000357348 GAGE13Q4V321 117 aa9.54□□□□□ -0.88
RTFDC1-202ENST00000357348 KHDC1LQ5JSQ8 128 aa9.54□□□□□ -0.88
RTFDC1-202ENST00000357348 RNF182Q8N6D2 247 aa9.54□□□□□ -0.88
RTFDC1-202ENST00000357348 SMIM2Q9BVW6 85 aa9.54□□□□□ -0.88
RTFDC1-202ENST00000357348 MORN3Q6PF18 240 aaPredicted RBP9.53□□□□□ -0.88
RTFDC1-202ENST00000357348 SH2D6Q7Z4S9 175 aa9.53□□□□□ -0.88
RTFDC1-202ENST00000357348 Q8N2B8 174 aa9.53□□□□□ -0.88
RTFDC1-202ENST00000357348 NEXN-AS1Q8NBZ9 246 aa9.53□□□□□ -0.88
RTFDC1-202ENST00000357348 TOMM6Q96B49 74 aa9.53□□□□□ -0.88
RTFDC1-202ENST00000357348 WNK1Q9H4A3 2382 aa9.52□□□□□ -0.88
RTFDC1-202ENST00000357348 TRAV26-2A0A0B4J265 109 aa9.52□□□□□ -0.88
RTFDC1-202ENST00000357348 IGHV3-66A0A0C4DH42 116 aa9.52□□□□□ -0.88
RTFDC1-202ENST00000357348 FAM223BA6NKX1 122 aa9.52□□□□□ -0.88
RTFDC1-202ENST00000357348 ETDBQ3ZM63 59 aa9.52□□□□□ -0.88
RTFDC1-202ENST00000357348 ORMDL2Q53FV1 153 aa9.52□□□□□ -0.88
RTFDC1-202ENST00000357348 FAM223AQ8IWN6 122 aa9.52□□□□□ -0.88
RTFDC1-202ENST00000357348 LINC01006Q8NI28 216 aa9.52□□□□□ -0.88
RTFDC1-202ENST00000357348 U3KQE9 123 aa9.52□□□□□ -0.88
RTFDC1-202ENST00000357348 OR11H12B2RN74 326 aa9.52□□□□□ -0.89
RTFDC1-202ENST00000357348 SMAGPQ0VAQ4 97 aa9.52□□□□□ -0.89
RTFDC1-202ENST00000357348 TMEM78Q5T7P6 136 aa9.52□□□□□ -0.89
RTFDC1-202ENST00000357348 C18orf65Q6ZTR6 163 aa9.52□□□□□ -0.89
RTFDC1-202ENST00000357348 OR11H1Q8NG94 326 aa9.52□□□□□ -0.89
RTFDC1-202ENST00000357348 OR11H2Q8NH07 326 aa9.52□□□□□ -0.89
RTFDC1-202ENST00000357348 ATP6V0E2Q8NHE4 81 aa9.52□□□□□ -0.89
RTFDC1-202ENST00000357348 LENEPQ9Y5L5 61 aa9.52□□□□□ -0.89
RTFDC1-202ENST00000357348 IGHV3OR16-13A0A075B7E8 117 aa9.51□□□□□ -0.89
RTFDC1-202ENST00000357348 TRBV7-1A0A0A6YYK4 115 aa9.51□□□□□ -0.89
RTFDC1-202ENST00000357348 IGHV3-74A0A0B4J1X5 117 aa9.51□□□□□ -0.89
RTFDC1-202ENST00000357348 C20orf78Q9BR46 151 aa9.51□□□□□ -0.89
RTFDC1-202ENST00000357348 H3BUA1 57 aa9.51□□□□□ -0.89
RTFDC1-202ENST00000357348 LGALS1P09382 135 aaKnown RBP9.51□□□□□ -0.89
RTFDC1-202ENST00000357348 ARL3P36405 182 aa9.51□□□□□ -0.89
RTFDC1-202ENST00000357348 AMTNQ6UX39 209 aa9.51□□□□□ -0.89
RTFDC1-202ENST00000357348 ATP6V0BQ99437 205 aa9.51□□□□□ -0.89
RTFDC1-202ENST00000357348 DEFB136Q30KP8 78 aa9.5□□□□□ -0.89
RTFDC1-202ENST00000357348 TCTEX1D4Q5JR98 221 aa9.5□□□□□ -0.89
RTFDC1-202ENST00000357348 SPANXN1Q5VSR9 72 aa9.5□□□□□ -0.89
RTFDC1-202ENST00000357348 USMG5Q96IX5 58 aa9.5□□□□□ -0.89
RTFDC1-202ENST00000357348 UFC1Q9Y3C8 167 aa9.5□□□□□ -0.89
RTFDC1-202ENST00000357348 IGHV3-49A0A0A0MS15 119 aa9.5□□□□□ -0.89
RTFDC1-202ENST00000357348 A0A1B0GV72 72 aa9.5□□□□□ -0.89
RTFDC1-202ENST00000357348 A0A1W2PRX2 142 aa9.5□□□□□ -0.89
RTFDC1-202ENST00000357348 UBE2D1P51668 147 aa9.5□□□□□ -0.89
RTFDC1-202ENST00000357348 C8orf86Q6ZUL3 223 aa9.5□□□□□ -0.89
RTFDC1-202ENST00000357348 DUX3Q96PT4 197 aa9.5□□□□□ -0.89
RTFDC1-202ENST00000357348 ZNF580Q9UK33 172 aa9.5□□□□□ -0.89
RTFDC1-202ENST00000357348 TENM1Q9UKZ4 2725 aa9.49□□□□□ -0.89
RTFDC1-202ENST00000357348 M0R381 172 aa9.49□□□□□ -0.89
RTFDC1-202ENST00000357348 SUMO2P61956 95 aaKnown RBP9.49□□□□□ -0.89
RTFDC1-202ENST00000357348 CFAP126Q5VTH2 177 aa9.49□□□□□ -0.89
RTFDC1-202ENST00000357348 RASL10AQ92737 203 aa9.49□□□□□ -0.89
RTFDC1-202ENST00000357348 SCGB3A1Q96QR1 104 aa9.49□□□□□ -0.89
RTFDC1-202ENST00000357348 ELANEP08246 267 aa9.48□□□□□ -0.89
RTFDC1-202ENST00000357348 METTL26Q96S19 204 aa9.48□□□□□ -0.89
RTFDC1-202ENST00000357348 ATRQ13535 2644 aa9.48□□□□□ -0.89
RTFDC1-202ENST00000357348 MED14OSP0DP75 135 aa9.48□□□□□ -0.89
RTFDC1-202ENST00000357348 CD28P10747 220 aa9.48□□□□□ -0.89
RTFDC1-202ENST00000357348 PRR9Q5T870 116 aa9.48□□□□□ -0.89
RTFDC1-202ENST00000357348 UNQ9165/PRO28630Q6UXU0 137 aa9.48□□□□□ -0.89
RTFDC1-202ENST00000357348 Q6ZQT7 251 aa9.48□□□□□ -0.89
RTFDC1-202ENST00000357348 BAALCQ8WXS3 180 aa9.48□□□□□ -0.89
RTFDC1-202ENST00000357348 H3BVH4 76 aa9.47□□□□□ -0.89
RTFDC1-202ENST00000357348 SMCPP49901 116 aaPredicted RBP9.47□□□□□ -0.89
RTFDC1-202ENST00000357348 INSL3P51460 131 aa9.47□□□□□ -0.89
RTFDC1-202ENST00000357348 POM121L12Q8N7R1 296 aa9.47□□□□□ -0.89
RTFDC1-202ENST00000357348 C1QTNF4Q9BXJ3 329 aa9.47□□□□□ -0.89
RTFDC1-202ENST00000357348 BRI3O95415 125 aa9.47□□□□□ -0.89
RTFDC1-202ENST00000357348 FOXI1Q12951 378 aa9.47□□□□□ -0.89
RTFDC1-202ENST00000357348 PRADC1Q9BSG0 188 aa9.47□□□□□ -0.89
RTFDC1-202ENST00000357348 DPH3P1Q9H4G8 78 aa9.47□□□□□ -0.89
RTFDC1-202ENST00000357348 CYSLTR1Q9Y271 337 aa9.47□□□□□ -0.89
RTFDC1-202ENST00000357348 TMEM238LA0A1B0GVL6 79 aa9.46□□□□□ -0.89
RTFDC1-202ENST00000357348 A6NJY4 79 aa9.46□□□□□ -0.89
RTFDC1-202ENST00000357348 UBE2D3P61077 147 aa9.46□□□□□ -0.89
RTFDC1-202ENST00000357348 UBE2D2P62837 147 aa9.46□□□□□ -0.89
RTFDC1-202ENST00000357348 KLHL30-AS1Q8NEE0 82 aa9.46□□□□□ -0.89
RTFDC1-202ENST00000357348 DLX4Q92988 240 aaPredicted RBP9.46□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms