RNA–Protein interactions for RNA: ENST00000357008.6

CHD4-201, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CHD4, Length 6,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-201ENST00000357008 PIFOQ8TCI5 191 aa11.45□□□□□ -0.58
CHD4-201ENST00000357008 DKK4Q9UBT3 224 aa11.45□□□□□ -0.58
CHD4-201ENST00000357008 MRPL36Q9P0J6 103 aaKnown RBP11.45□□□□□ -0.58
CHD4-201ENST00000357008 DYSFO75923 2080 aa11.45□□□□□ -0.58
CHD4-201ENST00000357008 COX7A2LO14548 114 aa11.45□□□□□ -0.58
CHD4-201ENST00000357008 PSMB8P28062 276 aa11.45□□□□□ -0.58
CHD4-201ENST00000357008 DEFB136Q30KP8 78 aa11.45□□□□□ -0.58
CHD4-201ENST00000357008 PIP4P1Q86T03 277 aa11.45□□□□□ -0.58
CHD4-201ENST00000357008 JMJD7-PLA2G4BH0Y9G9 81 aa11.44□□□□□ -0.58
CHD4-201ENST00000357008 J3KT08 172 aa11.44□□□□□ -0.58
CHD4-201ENST00000357008 KIAA1671Q9BY89 1806 aa11.44□□□□□ -0.58
CHD4-201ENST00000357008 IGLV1-47P01700 117 aa11.44□□□□□ -0.58
CHD4-201ENST00000357008 GRNP28799 593 aaKnown RBP11.44□□□□□ -0.58
CHD4-201ENST00000357008 SLURP1P55000 103 aa11.44□□□□□ -0.58
CHD4-201ENST00000357008 DAND5Q8N907 189 aa11.44□□□□□ -0.58
CHD4-201ENST00000357008 A0A1B0GXF2 115 aa11.44□□□□□ -0.58
CHD4-201ENST00000357008 K7EMT4 169 aa11.44□□□□□ -0.58
CHD4-201ENST00000357008 GYPEP15421 78 aa11.44□□□□□ -0.58
CHD4-201ENST00000357008 ETDCA0A1B0GVM5 59 aa11.43□□□□□ -0.58
CHD4-201ENST00000357008 ZNF503Q96F45 646 aa11.43□□□□□ -0.58
CHD4-201ENST00000357008 C1orf43Q9BWL3 253 aa11.43□□□□□ -0.58
CHD4-201ENST00000357008 E7EUB6 86 aa11.43□□□□□ -0.58
CHD4-201ENST00000357008 BLCAPP62952 87 aa11.43□□□□□ -0.58
CHD4-201ENST00000357008 Q71RC1 249 aaPredicted RBP11.43□□□□□ -0.58
CHD4-201ENST00000357008 VSIG2Q96IQ7 327 aa11.43□□□□□ -0.58
CHD4-201ENST00000357008 UBE2BP63146 152 aa11.43□□□□□ -0.58
CHD4-201ENST00000357008 C5orf56Q8N8D9 126 aa11.43□□□□□ -0.58
CHD4-201ENST00000357008 CAMK2N2Q96S95 79 aa11.43□□□□□ -0.58
CHD4-201ENST00000357008 NACAE9PAV3 2078 aa11.43□□□□□ -0.58
CHD4-201ENST00000357008 TRBV7-3A0A075B6L6 115 aa11.42□□□□□ -0.58
CHD4-201ENST00000357008 CGB3P0DN86 165 aa11.42□□□□□ -0.58
CHD4-201ENST00000357008 IGHV4-4A0A075B6R2 117 aa11.42□□□□□ -0.58
CHD4-201ENST00000357008 TNRC6AQ8NDV7 1962 aaKnown RBP11.42□□□□□ -0.58
CHD4-201ENST00000357008 P0C879 139 aa11.42□□□□□ -0.58
CHD4-201ENST00000357008 MRPL23Q16540 153 aaKnown RBP11.42□□□□□ -0.58
CHD4-201ENST00000357008 IGHV1-58A0A0C4DH39 117 aa11.41□□□□□ -0.58
CHD4-201ENST00000357008 IGHV4-61A0A0C4DH41 118 aa11.41□□□□□ -0.58
CHD4-201ENST00000357008 NDUFS5O43920 106 aa11.41□□□□□ -0.58
CHD4-201ENST00000357008 IGHV4-38-2P0DP08 117 aa11.41□□□□□ -0.58
CHD4-201ENST00000357008 CLEC2BQ92478 149 aa11.41□□□□□ -0.58
CHD4-201ENST00000357008 ZGRF1Q86YA3 2104 aa11.41□□□□□ -0.58
CHD4-201ENST00000357008 LECT2O14960 151 aa11.41□□□□□ -0.58
CHD4-201ENST00000357008 NDUFA11Q86Y39 141 aa11.41□□□□□ -0.58
CHD4-201ENST00000357008 NREPQ16612 68 aa11.41□□□□□ -0.58
CHD4-201ENST00000357008 WT1P19544 449 aaPredicted RBP11.4□□□□□ -0.58
CHD4-201ENST00000357008 NOTCH4Q99466 2003 aa11.4□□□□□ -0.58
CHD4-201ENST00000357008 IGLV10-54A0A075B6I4 117 aa11.4□□□□□ -0.58
CHD4-201ENST00000357008 C20orf203Q8NBC4 194 aa11.4□□□□□ -0.58
CHD4-201ENST00000357008 TMEM61Q8N0U2 210 aa11.4□□□□□ -0.58
CHD4-201ENST00000357008 NDUFC2O95298 119 aa11.39□□□□□ -0.59
CHD4-201ENST00000357008 IGLV2-8P01709 118 aa11.39□□□□□ -0.59
CHD4-201ENST00000357008 CGB7P0DN87 165 aa11.39□□□□□ -0.59
CHD4-201ENST00000357008 PTH2Q96A98 100 aa11.39□□□□□ -0.59
CHD4-201ENST00000357008 ATP5G1P05496 136 aa11.39□□□□□ -0.59
CHD4-201ENST00000357008 GPHB5Q86YW7 130 aa11.39□□□□□ -0.59
CHD4-201ENST00000357008 IGKV1D-37A0A075B6S9 117 aa11.38□□□□□ -0.59
CHD4-201ENST00000357008 MP68P56378 58 aa11.38□□□□□ -0.59
CHD4-201ENST00000357008 DENND4CQ5VZ89 1909 aa11.38□□□□□ -0.59
CHD4-201ENST00000357008 C5orf47Q569G3 176 aa11.38□□□□□ -0.59
CHD4-201ENST00000357008 LOXL1Q08397 574 aaPredicted RBP11.38□□□□□ -0.59
CHD4-201ENST00000357008 TRAV26-1A0A087WT03 109 aa11.38□□□□□ -0.59
CHD4-201ENST00000357008 CXCL5P42830 114 aa11.38□□□□□ -0.59
CHD4-201ENST00000357008 Q9HAA7 133 aa11.38□□□□□ -0.59
CHD4-201ENST00000357008 RPL18AQ02543 176 aaKnown RBP11.38□□□□□ -0.59
CHD4-201ENST00000357008 CRYGBP07316 175 aa11.37□□□□□ -0.59
CHD4-201ENST00000357008 IGHV3-30-3P0DP02 117 aa11.37□□□□□ -0.59
CHD4-201ENST00000357008 PRB1P04280 392 aa11.37□□□□□ -0.59
CHD4-201ENST00000357008 Q8N7P7 452 aa11.37□□□□□ -0.59
CHD4-201ENST00000357008 SPART-AS1P0CW21 52 aa11.37□□□□□ -0.59
CHD4-201ENST00000357008 LINC00643Q86TS7 51 aa11.37□□□□□ -0.59
CHD4-201ENST00000357008 NCKAP5O14513 1909 aa11.37□□□□□ -0.59
CHD4-201ENST00000357008 IGHV4OR15-8A0A075B7B6 117 aa11.37□□□□□ -0.59
CHD4-201ENST00000357008 A0A087WW49 117 aa11.37□□□□□ -0.59
CHD4-201ENST00000357008 IGHV4-28A0A0C4DH34 117 aa11.37□□□□□ -0.59
CHD4-201ENST00000357008 FANCD2OSQ96PS1 177 aa11.36□□□□□ -0.59
CHD4-201ENST00000357008 PKIGQ9Y2B9 76 aa11.36□□□□□ -0.59
CHD4-201ENST00000357008 TCL1BO95988 128 aa11.36□□□□□ -0.59
CHD4-201ENST00000357008 MIR7-3HGQ8N6C7 128 aa11.36□□□□□ -0.59
CHD4-201ENST00000357008 IGHV4-30-2A0A087WSY4 118 aa11.35□□□□□ -0.59
CHD4-201ENST00000357008 GDF5OSQ5U4N7 250 aa11.35□□□□□ -0.59
CHD4-201ENST00000357008 LINC00322Q6ZN03 302 aaPredicted RBP11.35□□□□□ -0.59
CHD4-201ENST00000357008 TMEM89A2RUT3 159 aa11.35□□□□□ -0.59
CHD4-201ENST00000357008 TMEM256-PLSCR3K7ERE1 68 aa11.35□□□□□ -0.59
CHD4-201ENST00000357008 NDUFA1O15239 70 aa11.35□□□□□ -0.59
CHD4-201ENST00000357008 C9orf66Q5T8R8 295 aa11.35□□□□□ -0.59
CHD4-201ENST00000357008 WFDC9Q8NEX5 89 aa11.35□□□□□ -0.59
CHD4-201ENST00000357008 IGF2-ASQ6U949 168 aa11.35□□□□□ -0.59
CHD4-201ENST00000357008 MIAQ16674 131 aa11.34□□□□□ -0.59
CHD4-201ENST00000357008 MLST8Q9BVC4 326 aa11.34□□□□□ -0.59
CHD4-201ENST00000357008 NDUFB1O75438 58 aa11.34□□□□□ -0.59
CHD4-201ENST00000357008 MDFICQ9P1T7 246 aa11.34□□□□□ -0.59
CHD4-201ENST00000357008 HHLA3Q9XRX5 114 aa11.34□□□□□ -0.59
CHD4-201ENST00000357008 PLCE1Q9P212 2302 aa11.34□□□□□ -0.59
CHD4-201ENST00000357008 DEFB1P60022 68 aa11.34□□□□□ -0.59
CHD4-201ENST00000357008 Q6ZUT4 128 aa11.34□□□□□ -0.59
CHD4-201ENST00000357008 NCR3O14931 201 aa11.33□□□□□ -0.6
CHD4-201ENST00000357008 PLXNB3Q9ULL4 1909 aa11.33□□□□□ -0.6
CHD4-201ENST00000357008 ZNF80P51504 273 aaPredicted RBP11.33□□□□□ -0.6
CHD4-201ENST00000357008 TANC1Q9C0D5 1861 aa11.33□□□□□ -0.6
CHD4-201ENST00000357008 C10orf105Q8TEF2 133 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms