RNA–Protein interactions for RNA: ENST00000355522.5

C2CD4A-201, Transcript of C2 calcium dependent domain containing 4A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C2CD4A, Length 3,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD4A-201ENST00000355522 VCX2Q9H322 139 aa12.41□□□□□ -0.42
C2CD4A-201ENST00000355522 UBTD1Q9HAC8 227 aa12.41□□□□□ -0.42
C2CD4A-201ENST00000355522 GNRH2O43555 120 aa12.41□□□□□ -0.42
C2CD4A-201ENST00000355522 IGKV3-20P01619 116 aa12.41□□□□□ -0.42
C2CD4A-201ENST00000355522 C10orf126Q8N4M7 172 aa12.41□□□□□ -0.42
C2CD4A-201ENST00000355522 IFITM1P13164 125 aa12.4□□□□□ -0.42
C2CD4A-201ENST00000355522 OR10J6PQ8NGY7 276 aa12.4□□□□□ -0.42
C2CD4A-201ENST00000355522 EPG5Q9HCE0 2579 aa12.4□□□□□ -0.42
C2CD4A-201ENST00000355522 ABCA2Q9BZC7 2435 aa12.4□□□□□ -0.42
C2CD4A-201ENST00000355522 F6UB75 175 aa12.4□□□□□ -0.42
C2CD4A-201ENST00000355522 CFC1BP0CG36 223 aa12.4□□□□□ -0.42
C2CD4A-201ENST00000355522 CFC1P0CG37 223 aa12.4□□□□□ -0.42
C2CD4A-201ENST00000355522 C15orf53Q8NAA6 179 aa12.4□□□□□ -0.42
C2CD4A-201ENST00000355522 TOMM6Q96B49 74 aa12.4□□□□□ -0.42
C2CD4A-201ENST00000355522 JMJD1CQ15652 2540 aa12.4□□□□□ -0.43
C2CD4A-201ENST00000355522 TRAV12-1A0A0B4J245 112 aa12.39□□□□□ -0.43
C2CD4A-201ENST00000355522 PKD1L2Q7Z442 2459 aa12.39□□□□□ -0.43
C2CD4A-201ENST00000355522 HTN1P15515 57 aa12.39□□□□□ -0.43
C2CD4A-201ENST00000355522 KAAG1Q9UBP8 84 aa12.39□□□□□ -0.43
C2CD4A-201ENST00000355522 IGHV7-4-1A0A0J9YVY3 117 aa12.39□□□□□ -0.43
C2CD4A-201ENST00000355522 TEX49A0A1B0GTD5 131 aa12.39□□□□□ -0.43
C2CD4A-201ENST00000355522 CRLF1O75462 422 aa12.39□□□□□ -0.43
C2CD4A-201ENST00000355522 FAM159AQ6UWV7 190 aa12.39□□□□□ -0.43
C2CD4A-201ENST00000355522 OPRPNQ99935 248 aaPredicted RBP12.39□□□□□ -0.43
C2CD4A-201ENST00000355522 BUB3O43684 328 aa12.38□□□□□ -0.43
C2CD4A-201ENST00000355522 AJUBAQ96IF1 538 aa12.38□□□□□ -0.43
C2CD4A-201ENST00000355522 A0A0J9YY99 117 aa12.38□□□□□ -0.43
C2CD4A-201ENST00000355522 F8W735 103 aaPredicted RBP12.38□□□□□ -0.43
C2CD4A-201ENST00000355522 NDUFV3P56181 108 aaKnown RBP12.38□□□□□ -0.43
C2CD4A-201ENST00000355522 RNF5Q99942 180 aa12.38□□□□□ -0.43
C2CD4A-201ENST00000355522 CNFNQ9BYD5 112 aa12.38□□□□□ -0.43
C2CD4A-201ENST00000355522 JPT2Q9H910 190 aa12.38□□□□□ -0.43
C2CD4A-201ENST00000355522 ZNF56Q15929 161 aa12.37□□□□□ -0.43
C2CD4A-201ENST00000355522 J3QQQ9 107 aa12.37□□□□□ -0.43
C2CD4A-201ENST00000355522 IGFL3Q6UXB1 125 aa12.37□□□□□ -0.43
C2CD4A-201ENST00000355522 UBE2D1P51668 147 aa12.37□□□□□ -0.43
C2CD4A-201ENST00000355522 LY6DQ14210 128 aa12.37□□□□□ -0.43
C2CD4A-201ENST00000355522 PRR9Q5T870 116 aa12.37□□□□□ -0.43
C2CD4A-201ENST00000355522 SHISA2Q6UWI4 295 aa12.37□□□□□ -0.43
C2CD4A-201ENST00000355522 CFAP46Q8IYW2 2715 aa12.36□□□□□ -0.43
C2CD4A-201ENST00000355522 C2orf82Q6UX34 121 aa12.36□□□□□ -0.43
C2CD4A-201ENST00000355522 IGHV3-11P01762 117 aa12.36□□□□□ -0.43
C2CD4A-201ENST00000355522 LY6EQ16553 131 aa12.36□□□□□ -0.43
C2CD4A-201ENST00000355522 PMVKQ15126 192 aa12.36□□□□□ -0.43
C2CD4A-201ENST00000355522 MEIG1Q5JSS6 88 aa12.35□□□□□ -0.43
C2CD4A-201ENST00000355522 Q8N1Y9 231 aa12.35□□□□□ -0.43
C2CD4A-201ENST00000355522 TMEM190Q8WZ59 177 aa12.35□□□□□ -0.43
C2CD4A-201ENST00000355522 TRAV21A0A0B4J279 112 aa12.35□□□□□ -0.43
C2CD4A-201ENST00000355522 TRBV7-9A0A0J9YWB2 115 aa12.35□□□□□ -0.43
C2CD4A-201ENST00000355522 BRD3OSQ6XYD6 125 aa12.35□□□□□ -0.43
C2CD4A-201ENST00000355522 MTORP42345 2549 aa12.35□□□□□ -0.43
C2CD4A-201ENST00000355522 TRAV12-3A0A0B4J271 114 aa12.34□□□□□ -0.43
C2CD4A-201ENST00000355522 B9A039 149 aa12.34□□□□□ -0.43
C2CD4A-201ENST00000355522 ATP6V0E1O15342 81 aa12.34□□□□□ -0.43
C2CD4A-201ENST00000355522 CD7P09564 240 aa12.34□□□□□ -0.43
C2CD4A-201ENST00000355522 UBE2D3P61077 147 aa12.34□□□□□ -0.43
C2CD4A-201ENST00000355522 UBE2D2P62837 147 aa12.34□□□□□ -0.43
C2CD4A-201ENST00000355522 ZNF575Q86XF7 245 aa12.34□□□□□ -0.43
C2CD4A-201ENST00000355522 MSRB2Q9Y3D2 182 aa12.34□□□□□ -0.43
C2CD4A-201ENST00000355522 FBN2P35556 2912 aa12.34□□□□□ -0.43
C2CD4A-201ENST00000355522 VMO1Q7Z5L0 202 aa12.34□□□□□ -0.43
C2CD4A-201ENST00000355522 MUSTN1Q8IVN3 82 aa12.34□□□□□ -0.43
C2CD4A-201ENST00000355522 SPXQ9BT56 116 aa12.34□□□□□ -0.43
C2CD4A-201ENST00000355522 A0A0U1RRA0 63 aa12.34□□□□□ -0.43
C2CD4A-201ENST00000355522 TSPEAR-AS2P59090 65 aa12.34□□□□□ -0.43
C2CD4A-201ENST00000355522 ZFP36P26651 326 aaKnown RBP12.33□□□□□ -0.44
C2CD4A-201ENST00000355522 ATXN8Q156A1 80 aa12.33□□□□□ -0.44
C2CD4A-201ENST00000355522 PAPPA-AS1Q5QFB9 102 aa12.33□□□□□ -0.44
C2CD4A-201ENST00000355522 H3BMM0 161 aa12.32□□□□□ -0.44
C2CD4A-201ENST00000355522 EEF1AKMT3Q96AZ1 226 aa12.32□□□□□ -0.44
C2CD4A-201ENST00000355522 UBE2WQ96B02 151 aa12.32□□□□□ -0.44
C2CD4A-201ENST00000355522 DUX3Q96PT4 197 aa12.32□□□□□ -0.44
C2CD4A-201ENST00000355522 IGHV7-81A0A0B4J1V7 117 aa12.31□□□□□ -0.44
C2CD4A-201ENST00000355522 SDHAF1A6NFY7 115 aa12.31□□□□□ -0.44
C2CD4A-201ENST00000355522 RNASE13Q5GAN3 156 aaKnown RBP12.31□□□□□ -0.44
C2CD4A-201ENST00000355522 TNFRSF13BO14836 293 aaPredicted RBP12.31□□□□□ -0.44
C2CD4A-201ENST00000355522 IGHV3-30P01768 117 aa12.31□□□□□ -0.44
C2CD4A-201ENST00000355522 IGHV3-30-5P0DP03 117 aa12.31□□□□□ -0.44
C2CD4A-201ENST00000355522 TMEM95Q3KNT9 176 aa12.31□□□□□ -0.44
C2CD4A-201ENST00000355522 NF1P21359 2839 aa12.31□□□□□ -0.44
C2CD4A-201ENST00000355522 LINC01620Q4KN68 170 aa12.31□□□□□ -0.44
C2CD4A-201ENST00000355522 LINC00477Q96M19 166 aa12.3□□□□□ -0.44
C2CD4A-201ENST00000355522 TRAV8-3A0A0A6YYJ7 113 aa12.3□□□□□ -0.44
C2CD4A-201ENST00000355522 COX6CP09669 75 aa12.3□□□□□ -0.44
C2CD4A-201ENST00000355522 LINC01546A6NGU7 62 aa12.3□□□□□ -0.44
C2CD4A-201ENST00000355522 RPL32P62910 135 aaKnown RBP12.3□□□□□ -0.44
C2CD4A-201ENST00000355522 SRSF2Q01130 221 aaKnown RBP12.3□□□□□ -0.44
C2CD4A-201ENST00000355522 HIST2H2BDQ6DRA6 164 aa12.3□□□□□ -0.44
C2CD4A-201ENST00000355522 CHCHD5Q9BSY4 110 aa12.3□□□□□ -0.44
C2CD4A-201ENST00000355522 RBAKDNA6NC62 111 aa12.29□□□□□ -0.44
C2CD4A-201ENST00000355522 RPL13AP40429 203 aaKnown RBP12.29□□□□□ -0.44
C2CD4A-201ENST00000355522 COX8CQ7Z4L0 72 aa12.29□□□□□ -0.44
C2CD4A-201ENST00000355522 RHODO00212 210 aa12.29□□□□□ -0.44
C2CD4A-201ENST00000355522 ACANP16112 2415 aa12.29□□□□□ -0.44
C2CD4A-201ENST00000355522 LY6LH3BQJ8 138 aa12.28□□□□□ -0.44
C2CD4A-201ENST00000355522 CFAP161Q6P656 301 aa12.28□□□□□ -0.44
C2CD4A-201ENST00000355522 SLC25A29Q8N8R3 303 aa12.28□□□□□ -0.44
C2CD4A-201ENST00000355522 NPBQ8NG41 125 aa12.28□□□□□ -0.44
C2CD4A-201ENST00000355522 A0A1W2PPR1 153 aa12.28□□□□□ -0.44
C2CD4A-201ENST00000355522 IGHV3-73A0A0B4J1V6 119 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 116.2 ms