RNA–Protein interactions for RNA: ENST00000354513.9

PDGFA-201, Transcript of platelet derived growth factor subunit A, humanhuman

TSL 1 (best) BASIC

Gene PDGFA, Length 1,308 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFA-201ENST00000354513 ZFP30Q9Y2G7 519 aa10.59□□□□□ -0.71
PDGFA-201ENST00000354513 LTAP01374 205 aa10.58□□□□□ -0.71
PDGFA-201ENST00000354513 ZNF674Q2M3X9 581 aa10.58□□□□□ -0.71
PDGFA-201ENST00000354513 BAGE2Q86Y30 109 aa10.58□□□□□ -0.71
PDGFA-201ENST00000354513 NHLRC2Q8NBF2 726 aa10.58□□□□□ -0.71
PDGFA-201ENST00000354513 C9orf85Q96MD7 179 aa10.58□□□□□ -0.71
PDGFA-201ENST00000354513 SMDT1Q9H4I9 107 aa10.58□□□□□ -0.71
PDGFA-201ENST00000354513 FLG2Q5D862 2391 aaPredicted RBP10.58□□□□□ -0.72
PDGFA-201ENST00000354513 C9JQL5 133 aa10.58□□□□□ -0.72
PDGFA-201ENST00000354513 WFDC2Q14508 124 aa10.58□□□□□ -0.72
PDGFA-201ENST00000354513 SMUG1Q53HV7 270 aa10.58□□□□□ -0.72
PDGFA-201ENST00000354513 CENPWQ5EE01 88 aa10.58□□□□□ -0.72
PDGFA-201ENST00000354513 SH2D6Q7Z4S9 175 aa10.58□□□□□ -0.72
PDGFA-201ENST00000354513 COMMD7Q86VX2 200 aa10.58□□□□□ -0.72
PDGFA-201ENST00000354513 Q8N3U1 123 aa10.58□□□□□ -0.72
PDGFA-201ENST00000354513 KCNS1Q96KK3 526 aa10.58□□□□□ -0.72
PDGFA-201ENST00000354513 PARLQ9H300 379 aa10.58□□□□□ -0.72
PDGFA-201ENST00000354513 FAM30AQ9NZY2 134 aa10.58□□□□□ -0.72
PDGFA-201ENST00000354513 IGLV5-52A0A0A0MRZ9 124 aa10.57□□□□□ -0.72
PDGFA-201ENST00000354513 LINC00862A6NCI5 91 aa10.57□□□□□ -0.72
PDGFA-201ENST00000354513 PGPEP1LA6NFU8 196 aa10.57□□□□□ -0.72
PDGFA-201ENST00000354513 GNG4P50150 75 aa10.57□□□□□ -0.72
PDGFA-201ENST00000354513 Q8N814 137 aa10.57□□□□□ -0.72
PDGFA-201ENST00000354513 TMEM70Q9BUB7 260 aa10.57□□□□□ -0.72
PDGFA-201ENST00000354513 IGHV3-73A0A0B4J1V6 119 aa10.56□□□□□ -0.72
PDGFA-201ENST00000354513 TRBV6-4A0A1B0GX49 114 aa10.56□□□□□ -0.72
PDGFA-201ENST00000354513 LINC00694P0DN24 101 aa10.56□□□□□ -0.72
PDGFA-201ENST00000354513 RNASE3P12724 160 aaKnown RBP10.56□□□□□ -0.72
PDGFA-201ENST00000354513 ZNF876PQ49A33 203 aa10.56□□□□□ -0.72
PDGFA-201ENST00000354513 NTN5Q8WTR8 489 aaPredicted RBP10.56□□□□□ -0.72
PDGFA-201ENST00000354513 Q9HAA7 133 aa10.56□□□□□ -0.72
PDGFA-201ENST00000354513 GCGP01275 180 aa10.55□□□□□ -0.72
PDGFA-201ENST00000354513 IGHV3-30P01768 117 aa10.55□□□□□ -0.72
PDGFA-201ENST00000354513 IGHV3-33P01772 117 aa10.55□□□□□ -0.72
PDGFA-201ENST00000354513 IGHV3-30-3P0DP02 117 aa10.55□□□□□ -0.72
PDGFA-201ENST00000354513 IGHV3-30-5P0DP03 117 aa10.55□□□□□ -0.72
PDGFA-201ENST00000354513 RHOHQ15669 191 aa10.55□□□□□ -0.72
PDGFA-201ENST00000354513 Q6ZSN1 163 aa10.55□□□□□ -0.72
PDGFA-201ENST00000354513 ZC2HC1AQ96GY0 325 aa10.55□□□□□ -0.72
PDGFA-201ENST00000354513 SMIM7Q9BQ49 75 aa10.55□□□□□ -0.72
PDGFA-201ENST00000354513 TRBV20OR9-2A0A075B6H5 130 aa10.54□□□□□ -0.72
PDGFA-201ENST00000354513 ZNF727A8MUV8 499 aa10.54□□□□□ -0.72
PDGFA-201ENST00000354513 PSCAO43653 123 aa10.54□□□□□ -0.72
PDGFA-201ENST00000354513 MGST1P10620 155 aaKnown RBP10.54□□□□□ -0.72
PDGFA-201ENST00000354513 OR10J3Q5JRS4 329 aa10.54□□□□□ -0.72
PDGFA-201ENST00000354513 LELP1Q5T871 98 aa10.54□□□□□ -0.72
PDGFA-201ENST00000354513 UQCC3Q6UW78 93 aa10.54□□□□□ -0.72
PDGFA-201ENST00000354513 PTH2Q96A98 100 aa10.54□□□□□ -0.72
PDGFA-201ENST00000354513 MLST8Q9BVC4 326 aa10.54□□□□□ -0.72
PDGFA-201ENST00000354513 PKHD1L1Q86WI1 4243 aa10.54□□□□□ -0.72
PDGFA-201ENST00000354513 IGLV2-8P01709 118 aa10.53□□□□□ -0.72
PDGFA-201ENST00000354513 PFN1P07737 140 aaKnown RBP10.53□□□□□ -0.72
PDGFA-201ENST00000354513 COX8CQ7Z4L0 72 aa10.53□□□□□ -0.72
PDGFA-201ENST00000354513 Q9UF83 564 aa10.53□□□□□ -0.72
PDGFA-201ENST00000354513 TRAV8-6A0A0B4J262 113 aa10.52□□□□□ -0.73
PDGFA-201ENST00000354513 FABP5P3A8MUU1 101 aa10.52□□□□□ -0.73
PDGFA-201ENST00000354513 FAM74A3Q4VXF1 159 aa10.52□□□□□ -0.73
PDGFA-201ENST00000354513 FAM162BQ5T6X4 162 aa10.52□□□□□ -0.73
PDGFA-201ENST00000354513 PRR27Q6MZM9 219 aa10.52□□□□□ -0.73
PDGFA-201ENST00000354513 SMIM12Q96EX1 92 aa10.52□□□□□ -0.73
PDGFA-201ENST00000354513 PRADC1Q9BSG0 188 aa10.52□□□□□ -0.73
PDGFA-201ENST00000354513 GTSF1LQ9H1H1 148 aa10.52□□□□□ -0.73
PDGFA-201ENST00000354513 IGKV3D-20A0A0C4DH25 116 aa10.51□□□□□ -0.73
PDGFA-201ENST00000354513 CIDEAO60543 219 aa10.51□□□□□ -0.73
PDGFA-201ENST00000354513 SH2D1AO60880 128 aa10.51□□□□□ -0.73
PDGFA-201ENST00000354513 CRIP1P50238 77 aa10.51□□□□□ -0.73
PDGFA-201ENST00000354513 LAGE3Q14657 143 aa10.51□□□□□ -0.73
PDGFA-201ENST00000354513 Q6ZSA8 131 aa10.51□□□□□ -0.73
PDGFA-201ENST00000354513 OCC1Q8TAD7 63 aa10.51□□□□□ -0.73
PDGFA-201ENST00000354513 BIN3Q9NQY0 253 aa10.51□□□□□ -0.73
PDGFA-201ENST00000354513 FAT3Q8TDW7 4589 aa10.5□□□□□ -0.73
PDGFA-201ENST00000354513 TMEM241Q24JQ0 296 aa10.5□□□□□ -0.73
PDGFA-201ENST00000354513 UFSP1Q6NVU6 142 aa10.5□□□□□ -0.73
PDGFA-201ENST00000354513 ATP6V0E2Q8NHE4 81 aa10.5□□□□□ -0.73
PDGFA-201ENST00000354513 FAM229AH3BQW9 127 aa10.49□□□□□ -0.73
PDGFA-201ENST00000354513 K7EN84 100 aa10.49□□□□□ -0.73
PDGFA-201ENST00000354513 JPT2Q9H910 190 aa10.49□□□□□ -0.73
PDGFA-201ENST00000354513 NAT8Q9UHE5 227 aa10.49□□□□□ -0.73
PDGFA-201ENST00000354513 LRP1Q07954 4544 aaKnown RBP10.48□□□□□ -0.73
PDGFA-201ENST00000354513 DAZ4Q86SG3 579 aaKnown RBP10.48□□□□□ -0.73
PDGFA-201ENST00000354513 DAZAP1Q96EP5 407 aaKnown RBP10.48□□□□□ -0.73
PDGFA-201ENST00000354513 SAMD10Q9BYL1 202 aa10.48□□□□□ -0.73
PDGFA-201ENST00000354513 DAZ3Q9NR90 486 aaKnown RBP10.48□□□□□ -0.73
PDGFA-201ENST00000354513 TMEM218A2RU14 115 aa10.47□□□□□ -0.73
PDGFA-201ENST00000354513 GAGE12JA6NER3 117 aa10.47□□□□□ -0.73
PDGFA-201ENST00000354513 M0R036 132 aa10.47□□□□□ -0.73
PDGFA-201ENST00000354513 LECT2O14960 151 aa10.47□□□□□ -0.73
PDGFA-201ENST00000354513 GAGE1Q13065 139 aa10.47□□□□□ -0.73
PDGFA-201ENST00000354513 GAGE4Q13068 117 aa10.47□□□□□ -0.73
PDGFA-201ENST00000354513 GAGE5Q13069 117 aa10.47□□□□□ -0.73
PDGFA-201ENST00000354513 GAGE13Q4V321 117 aa10.47□□□□□ -0.73
PDGFA-201ENST00000354513 LINC01551Q86U37 167 aa10.47□□□□□ -0.73
PDGFA-201ENST00000354513 C14orf178Q8N769 122 aaPredicted RBP10.47□□□□□ -0.73
PDGFA-201ENST00000354513 DNAJC30Q96LL9 226 aa10.47□□□□□ -0.73
PDGFA-201ENST00000354513 B4DEV8 164 aa10.46□□□□□ -0.73
PDGFA-201ENST00000354513 RPL23P62829 140 aaKnown RBP10.46□□□□□ -0.73
PDGFA-201ENST00000354513 ADIRFQ15847 76 aa10.46□□□□□ -0.73
PDGFA-201ENST00000354513 ZFP2Q6ZN57 461 aa10.46□□□□□ -0.73
PDGFA-201ENST00000354513 TMSB15BA0A087X1C1 80 aa10.45□□□□□ -0.74
PDGFA-201ENST00000354513 C19orf71A6NCJ1 209 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 104.5 ms