RNA–Protein interactions for RNA: ENST00000344979.7

PDE4A-202, Transcript of phosphodiesterase 4A, humanhuman

TSL 1 (best) BASIC

Gene PDE4A, Length 2,579 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4A-202ENST00000344979 RIPPLY3P57055 190 aa13.67□□□□□ -0.22
PDE4A-202ENST00000344979 C12orf74Q32Q52 190 aa13.67□□□□□ -0.22
PDE4A-202ENST00000344979 SVIPQ8NHG7 77 aa13.67□□□□□ -0.22
PDE4A-202ENST00000344979 FBN2P35556 2912 aa13.67□□□□□ -0.22
PDE4A-202ENST00000344979 NXPH4O95158 308 aa13.67□□□□□ -0.22
PDE4A-202ENST00000344979 CD300EQ496F6 205 aaPredicted RBP13.67□□□□□ -0.22
PDE4A-202ENST00000344979 MDFICQ9P1T7 246 aa13.67□□□□□ -0.22
PDE4A-202ENST00000344979 SYNJ2BPP57105 145 aa13.66□□□□□ -0.22
PDE4A-202ENST00000344979 IGLL5B9A064 214 aa13.66□□□□□ -0.22
PDE4A-202ENST00000344979 RPL24P83731 157 aaKnown RBP13.65□□□□□ -0.22
PDE4A-202ENST00000344979 SPINK13Q1W4C9 94 aa13.65□□□□□ -0.22
PDE4A-202ENST00000344979 ZFP2Q6ZN57 461 aa13.65□□□□□ -0.22
PDE4A-202ENST00000344979 ZNF479Q96JC4 524 aa13.65□□□□□ -0.22
PDE4A-202ENST00000344979 ZNF256Q9Y2P7 627 aaPredicted RBP13.65□□□□□ -0.22
PDE4A-202ENST00000344979 ZNF815PA8K554 130 aa13.65□□□□□ -0.22
PDE4A-202ENST00000344979 TSHBP01222 138 aa13.65□□□□□ -0.22
PDE4A-202ENST00000344979 LGALS1P09382 135 aaKnown RBP13.65□□□□□ -0.22
PDE4A-202ENST00000344979 SNRPD3P62318 126 aaKnown RBP13.65□□□□□ -0.22
PDE4A-202ENST00000344979 SCGB1D4Q6XE38 83 aa13.65□□□□□ -0.22
PDE4A-202ENST00000344979 SDHAF1A6NFY7 115 aa13.64□□□□□ -0.23
PDE4A-202ENST00000344979 TGFAP01135 160 aa13.64□□□□□ -0.23
PDE4A-202ENST00000344979 TAL2Q16559 108 aa13.64□□□□□ -0.23
PDE4A-202ENST00000344979 KLHL30-AS1Q8NEE0 82 aa13.64□□□□□ -0.23
PDE4A-202ENST00000344979 KIR2DL4Q99706 377 aa13.64□□□□□ -0.23
PDE4A-202ENST00000344979 TRBV7-3A0A075B6L6 115 aa13.64□□□□□ -0.23
PDE4A-202ENST00000344979 CRYGDP07320 174 aa13.64□□□□□ -0.23
PDE4A-202ENST00000344979 ZNF56Q15929 161 aa13.64□□□□□ -0.23
PDE4A-202ENST00000344979 POM121L12Q8N7R1 296 aa13.64□□□□□ -0.23
PDE4A-202ENST00000344979 IGHV4OR15-8A0A075B7B6 117 aa13.63□□□□□ -0.23
PDE4A-202ENST00000344979 A0A087WW49 117 aa13.63□□□□□ -0.23
PDE4A-202ENST00000344979 Q8N1Y9 231 aa13.63□□□□□ -0.23
PDE4A-202ENST00000344979 C11orf86A6NJI1 115 aa13.63□□□□□ -0.23
PDE4A-202ENST00000344979 E9PLD3 99 aa13.63□□□□□ -0.23
PDE4A-202ENST00000344979 POLR2KP53803 58 aaKnown RBP13.63□□□□□ -0.23
PDE4A-202ENST00000344979 IGHV3-16A0A0C4DH30 117 aa13.62□□□□□ -0.23
PDE4A-202ENST00000344979 A0A0J9YX75 114 aa13.62□□□□□ -0.23
PDE4A-202ENST00000344979 VCYO14598 125 aa13.62□□□□□ -0.23
PDE4A-202ENST00000344979 AMTNQ6UX39 209 aa13.62□□□□□ -0.23
PDE4A-202ENST00000344979 PLEKHB2Q96CS7 222 aa13.62□□□□□ -0.23
PDE4A-202ENST00000344979 CUBNO60494 3623 aa13.62□□□□□ -0.23
PDE4A-202ENST00000344979 ABCA12Q86UK0 2595 aa13.62□□□□□ -0.23
PDE4A-202ENST00000344979 G3V4G9 280 aa13.62□□□□□ -0.23
PDE4A-202ENST00000344979 HTN1P15515 57 aa13.61□□□□□ -0.23
PDE4A-202ENST00000344979 SAMD13Q5VXD3 122 aa13.61□□□□□ -0.23
PDE4A-202ENST00000344979 LINC01356Q8N9X3 169 aa13.61□□□□□ -0.23
PDE4A-202ENST00000344979 MYO9AB2RTY4 2548 aa13.61□□□□□ -0.23
PDE4A-202ENST00000344979 IGIPA6NJ69 53 aa13.61□□□□□ -0.23
PDE4A-202ENST00000344979 H3BMG7 143 aa13.61□□□□□ -0.23
PDE4A-202ENST00000344979 MTURNQ8N3F0 131 aa13.61□□□□□ -0.23
PDE4A-202ENST00000344979 ZNF462Q96JM2 2506 aa13.6□□□□□ -0.23
PDE4A-202ENST00000344979 GATA3P23771 443 aa13.6□□□□□ -0.23
PDE4A-202ENST00000344979 SRSF9Q13242 221 aaKnown RBP eCLIP13.6□□□□□ -0.23
PDE4A-202ENST00000344979 IGLV4-69A0A075B6H9 119 aa13.6□□□□□ -0.23
PDE4A-202ENST00000344979 FOXI2Q6ZQN5 318 aa13.6□□□□□ -0.23
PDE4A-202ENST00000344979 K7EQG2 157 aa13.59□□□□□ -0.23
PDE4A-202ENST00000344979 PMVKQ15126 192 aa13.59□□□□□ -0.23
PDE4A-202ENST00000344979 TMEM170BQ5T4T1 132 aa13.59□□□□□ -0.23
PDE4A-202ENST00000344979 PTPN13Q12923 2485 aa13.59□□□□□ -0.23
PDE4A-202ENST00000344979 TEX15Q9BXT5 2789 aa13.59□□□□□ -0.23
PDE4A-202ENST00000344979 TEX48A0A1B0GUV7 120 aa13.58□□□□□ -0.24
PDE4A-202ENST00000344979 SYT8Q8NBV8 401 aa13.58□□□□□ -0.24
PDE4A-202ENST00000344979 C9orf85Q96MD7 179 aa13.58□□□□□ -0.24
PDE4A-202ENST00000344979 OPRPNQ99935 248 aaPredicted RBP13.58□□□□□ -0.24
PDE4A-202ENST00000344979 IGHV1OR15-1A0A075B7D0 117 aa13.58□□□□□ -0.24
PDE4A-202ENST00000344979 RRN3P1Q2M238 152 aa13.58□□□□□ -0.24
PDE4A-202ENST00000344979 SFTA2Q6UW10 78 aa13.58□□□□□ -0.24
PDE4A-202ENST00000344979 LGALS9O00182 355 aa13.57□□□□□ -0.24
PDE4A-202ENST00000344979 HOXD3P31249 432 aaPredicted RBP13.57□□□□□ -0.24
PDE4A-202ENST00000344979 DSCR9P59020 149 aa13.57□□□□□ -0.24
PDE4A-202ENST00000344979 WFDC2Q14508 124 aa13.57□□□□□ -0.24
PDE4A-202ENST00000344979 HOXA3O43365 443 aaPredicted RBP13.57□□□□□ -0.24
PDE4A-202ENST00000344979 RPL32P62910 135 aaKnown RBP13.57□□□□□ -0.24
PDE4A-202ENST00000344979 ZNF876PQ49A33 203 aa13.57□□□□□ -0.24
PDE4A-202ENST00000344979 ZNF580Q9UK33 172 aa13.57□□□□□ -0.24
PDE4A-202ENST00000344979 COX6B1P14854 86 aa13.56□□□□□ -0.24
PDE4A-202ENST00000344979 DEFB136Q30KP8 78 aa13.56□□□□□ -0.24
PDE4A-202ENST00000344979 MORN3Q6PF18 240 aaPredicted RBP13.56□□□□□ -0.24
PDE4A-202ENST00000344979 BEX4Q9NWD9 120 aaPredicted RBP13.56□□□□□ -0.24
PDE4A-202ENST00000344979 NAV2Q8IVL1 2488 aa13.56□□□□□ -0.24
PDE4A-202ENST00000344979 TRBV27A0A0K0K1C4 114 aa13.56□□□□□ -0.24
PDE4A-202ENST00000344979 M0QY20 66 aa13.56□□□□□ -0.24
PDE4A-202ENST00000344979 HERVK_113P61574 105 aa13.56□□□□□ -0.24
PDE4A-202ENST00000344979 PGPEP1Q9NXJ5 209 aa13.56□□□□□ -0.24
PDE4A-202ENST00000344979 ZNRF2Q8NHG8 242 aa13.55□□□□□ -0.24
PDE4A-202ENST00000344979 TMEM141Q96I45 108 aa13.55□□□□□ -0.24
PDE4A-202ENST00000344979 MRPL16Q9NX20 251 aaKnown RBP13.55□□□□□ -0.24
PDE4A-202ENST00000344979 IGHV3-73A0A0B4J1V6 119 aa13.55□□□□□ -0.24
PDE4A-202ENST00000344979 TLN2Q9Y4G6 2542 aa13.54□□□□□ -0.24
PDE4A-202ENST00000344979 LINC01619G3V211 115 aa13.54□□□□□ -0.24
PDE4A-202ENST00000344979 ODF3Q96PU9 254 aa13.54□□□□□ -0.24
PDE4A-202ENST00000344979 VPREB3Q9UKI3 123 aa13.54□□□□□ -0.24
PDE4A-202ENST00000344979 KNCNA6PVL3 124 aa13.54□□□□□ -0.24
PDE4A-202ENST00000344979 TSPEAR-AS2P59090 65 aa13.54□□□□□ -0.24
PDE4A-202ENST00000344979 C18orf65Q6ZTR6 163 aa13.54□□□□□ -0.24
PDE4A-202ENST00000344979 TIMM17AQ99595 171 aa13.54□□□□□ -0.24
PDE4A-202ENST00000344979 PRB1P04280 392 aa13.53□□□□□ -0.24
PDE4A-202ENST00000344979 PRM2P04554 102 aa13.53□□□□□ -0.24
PDE4A-202ENST00000344979 APOMO95445 188 aa13.53□□□□□ -0.24
PDE4A-202ENST00000344979 TCTEX1D4Q5JR98 221 aa13.53□□□□□ -0.24
PDE4A-202ENST00000344979 PAPPA-AS1Q5QFB9 102 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms