RNA–Protein interactions for RNA: ENST00000344204.8

TRIO-202, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIO, Length 11,100 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-202ENST00000344204 MINOS1Q5TGZ0 78 aa10.68□□□□□ -0.7
TRIO-202ENST00000344204 MRPL53Q96EL3 112 aaKnown RBP10.68□□□□□ -0.7
TRIO-202ENST00000344204 MINOS1-NBL1R4GNA1 71 aa10.68□□□□□ -0.7
TRIO-202ENST00000344204 ZNF524Q96C55 264 aa10.68□□□□□ -0.7
TRIO-202ENST00000344204 INSL3P51460 131 aa10.68□□□□□ -0.7
TRIO-202ENST00000344204 IGLV2-8P01709 118 aa10.67□□□□□ -0.7
TRIO-202ENST00000344204 GATA4P43694 442 aa10.67□□□□□ -0.7
TRIO-202ENST00000344204 TRAV25A0A0B4J276 109 aa10.67□□□□□ -0.7
TRIO-202ENST00000344204 SPTSSBQ8NFR3 76 aa10.67□□□□□ -0.7
TRIO-202ENST00000344204 RNF114Q9Y508 228 aa10.67□□□□□ -0.7
TRIO-202ENST00000344204 C20orf197Q8N268 126 aa10.67□□□□□ -0.7
TRIO-202ENST00000344204 Q8N976 141 aa10.67□□□□□ -0.7
TRIO-202ENST00000344204 DEFB124Q8NES8 71 aa10.67□□□□□ -0.7
TRIO-202ENST00000344204 C14orf132Q9NPU4 83 aa10.67□□□□□ -0.7
TRIO-202ENST00000344204 MSRB2Q9Y3D2 182 aa10.66□□□□□ -0.7
TRIO-202ENST00000344204 CD59P13987 128 aa10.66□□□□□ -0.7
TRIO-202ENST00000344204 LOXL1Q08397 574 aaPredicted RBP10.66□□□□□ -0.7
TRIO-202ENST00000344204 C17orf77Q96MU5 243 aa10.66□□□□□ -0.7
TRIO-202ENST00000344204 NDUFC1O43677 76 aa10.66□□□□□ -0.7
TRIO-202ENST00000344204 FOXE3Q13461 319 aa10.66□□□□□ -0.7
TRIO-202ENST00000344204 UCNP55089 124 aa10.66□□□□□ -0.7
TRIO-202ENST00000344204 TRAV4A0A0B4J268 109 aa10.66□□□□□ -0.7
TRIO-202ENST00000344204 MIAQ16674 131 aa10.66□□□□□ -0.7
TRIO-202ENST00000344204 MP68P56378 58 aa10.65□□□□□ -0.7
TRIO-202ENST00000344204 ATP1A1-AS1Q5TC04 95 aa10.65□□□□□ -0.7
TRIO-202ENST00000344204 FAM27E3Q08E93 113 aa10.65□□□□□ -0.7
TRIO-202ENST00000344204 DAZ1Q9NQZ3 744 aaKnown RBP10.65□□□□□ -0.7
TRIO-202ENST00000344204 NCOR2Q9Y618 2525 aa10.65□□□□□ -0.7
TRIO-202ENST00000344204 DAND5Q8N907 189 aa10.65□□□□□ -0.7
TRIO-202ENST00000344204 PATE3B3GLJ2 98 aa10.65□□□□□ -0.7
TRIO-202ENST00000344204 IGHV1OR15-1A0A075B7D0 117 aa10.65□□□□□ -0.7
TRIO-202ENST00000344204 MSRB1Q9NZV6 116 aa10.65□□□□□ -0.71
TRIO-202ENST00000344204 PRR19A6NJB7 356 aa10.64□□□□□ -0.71
TRIO-202ENST00000344204 LINC00310P59036 64 aa10.64□□□□□ -0.71
TRIO-202ENST00000344204 LENEPQ9Y5L5 61 aa10.64□□□□□ -0.71
TRIO-202ENST00000344204 KLK9Q9UKQ9 250 aa10.64□□□□□ -0.71
TRIO-202ENST00000344204 TIMM17AQ99595 171 aa10.64□□□□□ -0.71
TRIO-202ENST00000344204 SND1-IT1Q9HBX3 110 aa10.64□□□□□ -0.71
TRIO-202ENST00000344204 IGKV2D-26A0A0A0MRZ7 120 aa10.64□□□□□ -0.71
TRIO-202ENST00000344204 COX7B2Q8TF08 81 aa10.64□□□□□ -0.71
TRIO-202ENST00000344204 JMJD7-PLA2G4BH0Y9G9 81 aa10.64□□□□□ -0.71
TRIO-202ENST00000344204 U3KQK5 164 aa10.64□□□□□ -0.71
TRIO-202ENST00000344204 COX7A2LO14548 114 aa10.63□□□□□ -0.71
TRIO-202ENST00000344204 IGLV2-14P01704 120 aa10.63□□□□□ -0.71
TRIO-202ENST00000344204 RPL18AQ02543 176 aaKnown RBP10.63□□□□□ -0.71
TRIO-202ENST00000344204 TPSG1Q9NRR2 321 aa10.63□□□□□ -0.71
TRIO-202ENST00000344204 LINC00311Q8N616 119 aa10.63□□□□□ -0.71
TRIO-202ENST00000344204 MBD6Q96DN6 1003 aa10.63□□□□□ -0.71
TRIO-202ENST00000344204 RHPN1-AS1Q9BWJ2 59 aa10.63□□□□□ -0.71
TRIO-202ENST00000344204 PIEZO1Q92508 2521 aa10.63□□□□□ -0.71
TRIO-202ENST00000344204 MRPS12O15235 138 aaKnown RBP10.63□□□□□ -0.71
TRIO-202ENST00000344204 Q8TCH9 128 aa10.62□□□□□ -0.71
TRIO-202ENST00000344204 TRAV12-2A0A075B6T6 113 aa10.62□□□□□ -0.71
TRIO-202ENST00000344204 TRIAP1O43715 76 aa10.62□□□□□ -0.71
TRIO-202ENST00000344204 PDE6GP18545 87 aa10.62□□□□□ -0.71
TRIO-202ENST00000344204 MTORP42345 2549 aa10.62□□□□□ -0.71
TRIO-202ENST00000344204 PATE2Q6UY27 113 aa10.61□□□□□ -0.71
TRIO-202ENST00000344204 FDCSPQ8NFU4 85 aa10.61□□□□□ -0.71
TRIO-202ENST00000344204 LINC01560Q8TB33 94 aa10.61□□□□□ -0.71
TRIO-202ENST00000344204 RNASE6Q93091 150 aaKnown RBP10.61□□□□□ -0.71
TRIO-202ENST00000344204 SERP1Q9Y6X1 66 aa10.61□□□□□ -0.71
TRIO-202ENST00000344204 NAV2Q8IVL1 2488 aa10.61□□□□□ -0.71
TRIO-202ENST00000344204 LINC01619G3V211 115 aa10.61□□□□□ -0.71
TRIO-202ENST00000344204 P0C879 139 aa10.61□□□□□ -0.71
TRIO-202ENST00000344204 RPL39P62891 51 aaKnown RBP10.61□□□□□ -0.71
TRIO-202ENST00000344204 SMIM26A0A096LP01 95 aa10.61□□□□□ -0.71
TRIO-202ENST00000344204 OPRPNQ99935 248 aaPredicted RBP10.61□□□□□ -0.71
TRIO-202ENST00000344204 THSD7BQ9C0I4 1608 aa10.61□□□□□ -0.71
TRIO-202ENST00000344204 IGHV3-53P01767 116 aa10.61□□□□□ -0.71
TRIO-202ENST00000344204 MRPS36P82909 103 aaKnown RBP10.61□□□□□ -0.71
TRIO-202ENST00000344204 DAZ2Q13117 558 aaKnown RBP10.6□□□□□ -0.71
TRIO-202ENST00000344204 DAZ4Q86SG3 579 aaKnown RBP10.6□□□□□ -0.71
TRIO-202ENST00000344204 DAZ3Q9NR90 486 aaKnown RBP10.6□□□□□ -0.71
TRIO-202ENST00000344204 IGF2RP11717 2491 aa10.6□□□□□ -0.71
TRIO-202ENST00000344204 IGHV3-16A0A0C4DH30 117 aa10.6□□□□□ -0.71
TRIO-202ENST00000344204 BUB3O43684 328 aa10.6□□□□□ -0.71
TRIO-202ENST00000344204 FAM110DQ8TAY7 271 aaPredicted RBP10.6□□□□□ -0.71
TRIO-202ENST00000344204 CCL19Q99731 98 aa10.6□□□□□ -0.71
TRIO-202ENST00000344204 PRB2P02812 416 aaPredicted RBP10.6□□□□□ -0.71
TRIO-202ENST00000344204 SPINK13Q1W4C9 94 aa10.6□□□□□ -0.71
TRIO-202ENST00000344204 ODF3L1Q8IXM7 274 aa10.6□□□□□ -0.71
TRIO-202ENST00000344204 IGHV1-69P01742 117 aa10.6□□□□□ -0.71
TRIO-202ENST00000344204 LINC00526Q96FQ7 95 aa10.6□□□□□ -0.71
TRIO-202ENST00000344204 KRTAP27-1Q3LI81 207 aa10.6□□□□□ -0.71
TRIO-202ENST00000344204 ZNF295-AS1Q8N0V1 137 aa10.59□□□□□ -0.71
TRIO-202ENST00000344204 AGPAT4-IT1Q9H0P7 198 aa10.59□□□□□ -0.71
TRIO-202ENST00000344204 MAPKAPK5-AS1Q8N8E1 139 aa10.59□□□□□ -0.71
TRIO-202ENST00000344204 PROK2Q9HC23 129 aa10.59□□□□□ -0.71
TRIO-202ENST00000344204 A0A0J9YXV3 536 aa10.59□□□□□ -0.71
TRIO-202ENST00000344204 TRBV30A0A0K0K1B3 111 aa10.59□□□□□ -0.71
TRIO-202ENST00000344204 VWCEQ96DN2 955 aa10.59□□□□□ -0.71
TRIO-202ENST00000344204 TIMM17BO60830 172 aa10.59□□□□□ -0.71
TRIO-202ENST00000344204 TMEM256-PLSCR3K7ERE1 68 aa10.59□□□□□ -0.71
TRIO-202ENST00000344204 HTN3P15516 51 aa10.58□□□□□ -0.72
TRIO-202ENST00000344204 IGHV3-38A0A0C4DH36 116 aa10.58□□□□□ -0.72
TRIO-202ENST00000344204 ZNF491Q8N8L2 437 aa10.58□□□□□ -0.72
TRIO-202ENST00000344204 LECT2O14960 151 aa10.58□□□□□ -0.72
TRIO-202ENST00000344204 DPH3Q96FX2 82 aa10.58□□□□□ -0.72
TRIO-202ENST00000344204 NXPH4O95158 308 aa10.58□□□□□ -0.72
TRIO-202ENST00000344204 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 88.5 ms