RNA–Protein interactions for RNA: ENST00000343200.9

VCAN-203, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 9,455 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-203ENST00000343200 IGHV3-53P01767 116 aa4.88□□□□□ -1.63
VCAN-203ENST00000343200 IGLV3-21P80748 117 aaPredicted RBP4.88□□□□□ -1.63
VCAN-203ENST00000343200 LOXL1Q08397 574 aaPredicted RBP4.88□□□□□ -1.63
VCAN-203ENST00000343200 GAFA1Q96PS6 74 aa4.88□□□□□ -1.63
VCAN-203ENST00000343200 IGKV1-27A0A075B6S5 117 aa4.88□□□□□ -1.63
VCAN-203ENST00000343200 SRRM5B3KS81 715 aa4.88□□□□□ -1.63
VCAN-203ENST00000343200 ANGP03950 147 aaKnown RBP4.88□□□□□ -1.63
VCAN-203ENST00000343200 GNLYP22749 145 aa4.88□□□□□ -1.63
VCAN-203ENST00000343200 RNASE13Q5GAN3 156 aaKnown RBP4.88□□□□□ -1.63
VCAN-203ENST00000343200 VMO1Q7Z5L0 202 aa4.88□□□□□ -1.63
VCAN-203ENST00000343200 TIMM17AQ99595 171 aa4.88□□□□□ -1.63
VCAN-203ENST00000343200 UTP20O75691 2785 aaKnown RBP4.88□□□□□ -1.63
VCAN-203ENST00000343200 IGHV4-4A0A075B6R2 117 aa4.88□□□□□ -1.63
VCAN-203ENST00000343200 IGHV1OR15-9A0A0B4J2B8 117 aa4.88□□□□□ -1.63
VCAN-203ENST00000343200 BUB1B-PAK6H3BSN5 160 aa4.88□□□□□ -1.63
VCAN-203ENST00000343200 IGKV1-16P04430 117 aa4.88□□□□□ -1.63
VCAN-203ENST00000343200 CCL4P13236 92 aa4.88□□□□□ -1.63
VCAN-203ENST00000343200 LENEPQ9Y5L5 61 aa4.88□□□□□ -1.63
VCAN-203ENST00000343200 MRPL53Q96EL3 112 aaKnown RBP4.88□□□□□ -1.63
VCAN-203ENST00000343200 TM2D2Q9BX73 214 aa4.88□□□□□ -1.63
VCAN-203ENST00000343200 NANOS2P60321 138 aaKnown RBP4.88□□□□□ -1.63
VCAN-203ENST00000343200 ASPHD1Q5U4P2 390 aa4.88□□□□□ -1.63
VCAN-203ENST00000343200 SEM1Q6ZVN7 128 aa4.88□□□□□ -1.63
VCAN-203ENST00000343200 DEFB130BP0DP73 79 aa4.88□□□□□ -1.63
VCAN-203ENST00000343200 DEFB130AP0DP74 79 aa4.88□□□□□ -1.63
VCAN-203ENST00000343200 LHBP01229 141 aa4.87□□□□□ -1.63
VCAN-203ENST00000343200 PCOLCEQ15113 449 aa4.87□□□□□ -1.63
VCAN-203ENST00000343200 STPG1Q5TH74 334 aa4.87□□□□□ -1.63
VCAN-203ENST00000343200 HELZ2Q9BYK8 2649 aaKnown RBP4.87□□□□□ -1.63
VCAN-203ENST00000343200 CELA2AP08217 269 aa4.87□□□□□ -1.63
VCAN-203ENST00000343200 MIFP14174 115 aa4.87□□□□□ -1.63
VCAN-203ENST00000343200 IGHV3OR16-10A0A075B7F0 116 aa4.87□□□□□ -1.63
VCAN-203ENST00000343200 C4orf51C9J302 202 aa4.87□□□□□ -1.63
VCAN-203ENST00000343200 GATA1P15976 413 aaPredicted RBP4.87□□□□□ -1.63
VCAN-203ENST00000343200 RPL35AP18077 110 aaKnown RBP4.87□□□□□ -1.63
VCAN-203ENST00000343200 C7orf69Q9H7B7 122 aa4.87□□□□□ -1.63
VCAN-203ENST00000343200 ZNF726P1Q15940 193 aa4.87□□□□□ -1.63
VCAN-203ENST00000343200 IGHV1-69P01742 117 aa4.86□□□□□ -1.63
VCAN-203ENST00000343200 DAND5Q8N907 189 aa4.86□□□□□ -1.63
VCAN-203ENST00000343200 H3BRN7 92 aa4.86□□□□□ -1.63
VCAN-203ENST00000343200 CHCHD2P9Q5T1J5 151 aaPredicted RBP4.86□□□□□ -1.63
VCAN-203ENST00000343200 IGLV3-32A0A0A0MS00 114 aa4.86□□□□□ -1.63
VCAN-203ENST00000343200 TMEM178BH3BS89 294 aa4.86□□□□□ -1.63
VCAN-203ENST00000343200 FAM201AQ5SY85 155 aa4.86□□□□□ -1.63
VCAN-203ENST00000343200 SLC22A18ASQ8N1D0 253 aa4.86□□□□□ -1.63
VCAN-203ENST00000343200 DIRC1Q969H9 104 aa4.86□□□□□ -1.63
VCAN-203ENST00000343200 SMIM10L1P0DMW3 83 aa4.86□□□□□ -1.63
VCAN-203ENST00000343200 FOXF2Q12947 444 aa4.86□□□□□ -1.63
VCAN-203ENST00000343200 FAM120AOSQ5T036 256 aa4.86□□□□□ -1.63
VCAN-203ENST00000343200 SMIM10Q96HG1 83 aa4.86□□□□□ -1.63
VCAN-203ENST00000343200 CTRLP40313 264 aa4.86□□□□□ -1.63
VCAN-203ENST00000343200 SPINK13Q1W4C9 94 aa4.86□□□□□ -1.63
VCAN-203ENST00000343200 NRACQ8N912 160 aa4.86□□□□□ -1.63
VCAN-203ENST00000343200 MBD3L2Q8NHZ7 208 aaPredicted RBP4.86□□□□□ -1.63
VCAN-203ENST00000343200 IGKV1D-43A0A0B4J1Z2 117 aa4.86□□□□□ -1.63
VCAN-203ENST00000343200 PRR4Q16378 134 aa4.86□□□□□ -1.63
VCAN-203ENST00000343200 TRBV27A0A0K0K1C4 114 aa4.86□□□□□ -1.63
VCAN-203ENST00000343200 RHPN1-AS1Q9BWJ2 59 aa4.86□□□□□ -1.63
VCAN-203ENST00000343200 CFAP46Q8IYW2 2715 aa4.85□□□□□ -1.63
VCAN-203ENST00000343200 LINC00526Q96FQ7 95 aa4.85□□□□□ -1.63
VCAN-203ENST00000343200 CLPSL2Q6UWE3 100 aa4.85□□□□□ -1.63
VCAN-203ENST00000343200 IGHV3-16A0A0C4DH30 117 aa4.85□□□□□ -1.63
VCAN-203ENST00000343200 TIRAPP58753 221 aa4.85□□□□□ -1.63
VCAN-203ENST00000343200 COL6A5A8TX70 2615 aa4.85□□□□□ -1.63
VCAN-203ENST00000343200 IGHV1-2P23083 117 aa4.85□□□□□ -1.63
VCAN-203ENST00000343200 APOC4P55056 127 aa4.85□□□□□ -1.63
VCAN-203ENST00000343200 TMEM92Q6UXU6 159 aa4.85□□□□□ -1.63
VCAN-203ENST00000343200 KLHL30-AS1Q8NEE0 82 aa4.85□□□□□ -1.63
VCAN-203ENST00000343200 VOPP1Q96AW1 172 aa4.85□□□□□ -1.63
VCAN-203ENST00000343200 DKK4Q9UBT3 224 aa4.85□□□□□ -1.63
VCAN-203ENST00000343200 IGHV1-18A0A0C4DH31 117 aa4.85□□□□□ -1.63
VCAN-203ENST00000343200 NDUFA4O00483 81 aa4.85□□□□□ -1.63
VCAN-203ENST00000343200 CXCL6P80162 114 aa4.85□□□□□ -1.63
VCAN-203ENST00000343200 SP5Q6BEB4 398 aaPredicted RBP4.85□□□□□ -1.63
VCAN-203ENST00000343200 TRBV7-3A0A075B6L6 115 aa4.85□□□□□ -1.63
VCAN-203ENST00000343200 LILRA6Q6PI73 481 aa4.84□□□□□ -1.63
VCAN-203ENST00000343200 ZNRF2Q8NHG8 242 aa4.84□□□□□ -1.63
VCAN-203ENST00000343200 EFNA2O43921 213 aa4.84□□□□□ -1.63
VCAN-203ENST00000343200 IGKV1-39P01597 117 aa4.84□□□□□ -1.63
VCAN-203ENST00000343200 IGKV1D-39P04432 117 aa4.84□□□□□ -1.63
VCAN-203ENST00000343200 WFDC10BQ8IUB3 73 aa4.84□□□□□ -1.63
VCAN-203ENST00000343200 RPL39LQ96EH5 51 aaKnown RBP4.84□□□□□ -1.63
VCAN-203ENST00000343200 CENPFP49454 3210 aa4.84□□□□□ -1.63
VCAN-203ENST00000343200 CGB3P0DN86 165 aa4.84□□□□□ -1.63
VCAN-203ENST00000343200 CGB7P0DN87 165 aa4.84□□□□□ -1.63
VCAN-203ENST00000343200 C10orf55Q5SWW7 151 aa4.84□□□□□ -1.63
VCAN-203ENST00000343200 C20orf204Q6ZNR8 217 aa4.84□□□□□ -1.63
VCAN-203ENST00000343200 Q6ZRM9 215 aa4.84□□□□□ -1.63
VCAN-203ENST00000343200 FGF23Q9GZV9 251 aaPredicted RBP4.84□□□□□ -1.63
VCAN-203ENST00000343200 TRAV7A0A075B6U4 112 aa4.84□□□□□ -1.63
VCAN-203ENST00000343200 SPAG11BQ08648 103 aa4.84□□□□□ -1.63
VCAN-203ENST00000343200 DEFB112Q30KQ8 113 aa4.84□□□□□ -1.64
VCAN-203ENST00000343200 ZNF524Q96C55 264 aa4.84□□□□□ -1.64
VCAN-203ENST00000343200 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.84□□□□□ -1.64
VCAN-203ENST00000343200 IGKV2-29A2NJV5 120 aaPredicted RBP4.84□□□□□ -1.64
VCAN-203ENST00000343200 C5orf63A6NC05 138 aa4.84□□□□□ -1.64
VCAN-203ENST00000343200 FAM222AQ5U5X8 452 aa4.84□□□□□ -1.64
VCAN-203ENST00000343200 ZNF503Q96F45 646 aa4.84□□□□□ -1.64
VCAN-203ENST00000343200 K7EM74 188 aa4.83□□□□□ -1.64
VCAN-203ENST00000343200 LTBRP36941 435 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 169.6 ms