RNA–Protein interactions for RNA: ENST00000340829.9

CDK13-202, Transcript of cyclin dependent kinase 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CDK13, Length 5,066 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK13-202ENST00000340829 CCDC140Q96MF4 163 aa14.85□□□□□ -0.03
CDK13-202ENST00000340829 TRBV6-1A0A0K0K1D8 114 aa14.85□□□□□ -0.03
CDK13-202ENST00000340829 SPAG8Q99932 426 aaPredicted RBP14.85□□□□□ -0.03
CDK13-202ENST00000340829 TTTY13Q9BZ97 58 aa14.85□□□□□ -0.03
CDK13-202ENST00000340829 Q8N1Y9 231 aa14.84□□□□□ -0.03
CDK13-202ENST00000340829 C2orf70A6NJV1 201 aa14.84□□□□□ -0.03
CDK13-202ENST00000340829 NXPH4O95158 308 aa14.84□□□□□ -0.03
CDK13-202ENST00000340829 SCRT2Q9NQ03 307 aa14.84□□□□□ -0.03
CDK13-202ENST00000340829 ZFP2Q6ZN57 461 aa14.84□□□□□ -0.03
CDK13-202ENST00000340829 UBE2DNLQ8IWF7 75 aa14.84□□□□□ -0.03
CDK13-202ENST00000340829 CCDC168Q8NDH2 2452 aa14.83□□□□□ -0.03
CDK13-202ENST00000340829 ZNF80P51504 273 aaPredicted RBP14.83□□□□□ -0.03
CDK13-202ENST00000340829 DEFB125Q8N687 156 aa14.83□□□□□ -0.03
CDK13-202ENST00000340829 HERVK_113P63121 156 aa14.83□□□□□ -0.04
CDK13-202ENST00000340829 K7EMT4 169 aa14.83□□□□□ -0.04
CDK13-202ENST00000340829 CLPSL2Q6UWE3 100 aa14.83□□□□□ -0.04
CDK13-202ENST00000340829 HIVEP2P31629 2446 aa14.82□□□□□ -0.04
CDK13-202ENST00000340829 KIAA1549Q9HCM3 1950 aa14.82□□□□□ -0.04
CDK13-202ENST00000340829 GPHB5Q86YW7 130 aa14.82□□□□□ -0.04
CDK13-202ENST00000340829 NAV2Q8IVL1 2488 aa14.82□□□□□ -0.04
CDK13-202ENST00000340829 A0A1B0GXF2 115 aa14.82□□□□□ -0.04
CDK13-202ENST00000340829 A6NDX4 124 aa14.82□□□□□ -0.04
CDK13-202ENST00000340829 F8W1H4 67 aa14.82□□□□□ -0.04
CDK13-202ENST00000340829 APOC4P55056 127 aa14.82□□□□□ -0.04
CDK13-202ENST00000340829 GDF5OSQ5U4N7 250 aa14.82□□□□□ -0.04
CDK13-202ENST00000340829 TNRC6AQ8NDV7 1962 aaKnown RBP14.81□□□□□ -0.04
CDK13-202ENST00000340829 RPL39P62891 51 aaKnown RBP14.81□□□□□ -0.04
CDK13-202ENST00000340829 GAGE2AQ6NT46 116 aa14.81□□□□□ -0.04
CDK13-202ENST00000340829 OVOL2Q9BRP0 275 aa14.81□□□□□ -0.04
CDK13-202ENST00000340829 CRYGBP07316 175 aa14.81□□□□□ -0.04
CDK13-202ENST00000340829 CCL25O15444 150 aa14.8□□□□□ -0.04
CDK13-202ENST00000340829 A0A0J9YXV3 536 aa14.79□□□□□ -0.04
CDK13-202ENST00000340829 MLST8Q9BVC4 326 aa14.79□□□□□ -0.04
CDK13-202ENST00000340829 H3BMM0 161 aa14.79□□□□□ -0.04
CDK13-202ENST00000340829 UBE2WQ96B02 151 aa14.79□□□□□ -0.04
CDK13-202ENST00000340829 HIST1H4AP62805 103 aaKnown RBP14.79□□□□□ -0.04
CDK13-202ENST00000340829 A0A0J9YY99 117 aa14.78□□□□□ -0.04
CDK13-202ENST00000340829 LOXL1Q08397 574 aaPredicted RBP14.78□□□□□ -0.04
CDK13-202ENST00000340829 UTRNP46939 3433 aa14.78□□□□□ -0.04
CDK13-202ENST00000340829 ANGP03950 147 aaKnown RBP14.78□□□□□ -0.04
CDK13-202ENST00000340829 ZNF561-AS1K7EIQ3 104 aa14.77□□□□□ -0.04
CDK13-202ENST00000340829 PPDPFLQ8WWR9 84 aa14.77□□□□□ -0.05
CDK13-202ENST00000340829 TANC2Q9HCD6 1990 aa14.77□□□□□ -0.05
CDK13-202ENST00000340829 LY6LH3BQJ8 138 aa14.77□□□□□ -0.05
CDK13-202ENST00000340829 DSCAMO60469 2012 aa14.76□□□□□ -0.05
CDK13-202ENST00000340829 YPEL4Q96NS1 127 aa14.76□□□□□ -0.05
CDK13-202ENST00000340829 Q9H8V8 135 aa14.76□□□□□ -0.05
CDK13-202ENST00000340829 PRORYQ9H606 182 aa14.75□□□□□ -0.05
CDK13-202ENST00000340829 SPANXA1Q9NS26 97 aa14.75□□□□□ -0.05
CDK13-202ENST00000340829 MDFICQ9P1T7 246 aa14.75□□□□□ -0.05
CDK13-202ENST00000340829 PSCAO43653 123 aa14.75□□□□□ -0.05
CDK13-202ENST00000340829 XCL1P47992 114 aa14.75□□□□□ -0.05
CDK13-202ENST00000340829 HCFC1P51610 2035 aa14.74□□□□□ -0.05
CDK13-202ENST00000340829 MBD6Q96DN6 1003 aa14.74□□□□□ -0.05
CDK13-202ENST00000340829 FSTL3O95633 263 aa14.74□□□□□ -0.05
CDK13-202ENST00000340829 TMEM61Q8N0U2 210 aa14.74□□□□□ -0.05
CDK13-202ENST00000340829 RNF152Q8N8N0 203 aa14.74□□□□□ -0.05
CDK13-202ENST00000340829 TNFRSF13BO14836 293 aaPredicted RBP14.73□□□□□ -0.05
CDK13-202ENST00000340829 BAALCQ8WXS3 180 aa14.73□□□□□ -0.05
CDK13-202ENST00000340829 A0A0J9YX75 114 aa14.73□□□□□ -0.05
CDK13-202ENST00000340829 FXYD2P54710 66 aa14.73□□□□□ -0.05
CDK13-202ENST00000340829 DNAJC30Q96LL9 226 aa14.73□□□□□ -0.05
CDK13-202ENST00000340829 CFC1BP0CG36 223 aa14.73□□□□□ -0.05
CDK13-202ENST00000340829 CFC1P0CG37 223 aa14.73□□□□□ -0.05
CDK13-202ENST00000340829 HIVEP3Q5T1R4 2406 aa14.73□□□□□ -0.05
CDK13-202ENST00000340829 ODF1Q14990 250 aa14.72□□□□□ -0.05
CDK13-202ENST00000340829 TOMM6Q96B49 74 aa14.72□□□□□ -0.05
CDK13-202ENST00000340829 TMEM89A2RUT3 159 aa14.72□□□□□ -0.05
CDK13-202ENST00000340829 MED14OSP0DP75 135 aa14.72□□□□□ -0.05
CDK13-202ENST00000340829 CEP295Q9C0D2 2601 aa14.72□□□□□ -0.05
CDK13-202ENST00000340829 C11orf71Q6IPW1 123 aa14.72□□□□□ -0.05
CDK13-202ENST00000340829 Q6ZQT7 251 aa14.72□□□□□ -0.05
CDK13-202ENST00000340829 DNAH12Q6ZR08 3092 aa14.71□□□□□ -0.05
CDK13-202ENST00000340829 IGLL5B9A064 214 aa14.71□□□□□ -0.06
CDK13-202ENST00000340829 K7EQD1 137 aa14.71□□□□□ -0.06
CDK13-202ENST00000340829 C5orf38Q86SI9 138 aa14.71□□□□□ -0.06
CDK13-202ENST00000340829 CARD19Q96LW7 228 aa14.71□□□□□ -0.06
CDK13-202ENST00000340829 SORL1Q92673 2214 aa14.7□□□□□ -0.06
CDK13-202ENST00000340829 TRAV12-1A0A0B4J245 112 aa14.7□□□□□ -0.06
CDK13-202ENST00000340829 EBI3Q14213 229 aa14.7□□□□□ -0.06
CDK13-202ENST00000340829 NAV3Q8IVL0 2385 aa14.7□□□□□ -0.06
CDK13-202ENST00000340829 DOPEY1Q5JWR5 2465 aa14.69□□□□□ -0.06
CDK13-202ENST00000340829 BOD1L2Q8IYS8 172 aa14.69□□□□□ -0.06
CDK13-202ENST00000340829 C16orf74Q96GX8 76 aa14.69□□□□□ -0.06
CDK13-202ENST00000340829 MYO9AB2RTY4 2548 aa14.69□□□□□ -0.06
CDK13-202ENST00000340829 IGF1P05019 195 aa14.69□□□□□ -0.06
CDK13-202ENST00000340829 IGLC6P0CF74 106 aa14.69□□□□□ -0.06
CDK13-202ENST00000340829 IGHG4P01861 327 aa14.68□□□□□ -0.06
CDK13-202ENST00000340829 C2CD3Q4AC94 2353 aa14.68□□□□□ -0.06
CDK13-202ENST00000340829 C11orf86A6NJI1 115 aa14.68□□□□□ -0.06
CDK13-202ENST00000340829 SLC25A29Q8N8R3 303 aa14.68□□□□□ -0.06
CDK13-202ENST00000340829 C4orf3Q8WVX3 66 aa14.68□□□□□ -0.06
CDK13-202ENST00000340829 TRAV13-2A0A0B4J235 113 aa14.67□□□□□ -0.06
CDK13-202ENST00000340829 INAFM2P0DMQ5 153 aa14.67□□□□□ -0.06
CDK13-202ENST00000340829 CRIP1P50238 77 aa14.67□□□□□ -0.06
CDK13-202ENST00000340829 ARHGAP32A7KAX9 2087 aa14.67□□□□□ -0.06
CDK13-202ENST00000340829 GYPEP15421 78 aa14.67□□□□□ -0.06
CDK13-202ENST00000340829 CITED2Q99967 270 aaPredicted RBP14.67□□□□□ -0.06
CDK13-202ENST00000340829 TP53TG3Q9ULZ0 132 aa14.67□□□□□ -0.06
CDK13-202ENST00000340829 ATG2AQ2TAZ0 1938 aa14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms