RNA–Protein interactions for RNA: ENST00000337392.9

CLPTM1-201, Transcript of CLPTM1, transmembrane protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLPTM1, Length 2,604 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-201ENST00000337392 SMR3AQ99954 134 aa17.16■□□□□ 0.34
CLPTM1-201ENST00000337392 NXT2Q9NPJ8 142 aaKnown RBP17.16■□□□□ 0.34
CLPTM1-201ENST00000337392 TRAV8-6A0A0B4J262 113 aa17.15■□□□□ 0.34
CLPTM1-201ENST00000337392 G3V4G9 280 aa17.15■□□□□ 0.34
CLPTM1-201ENST00000337392 PRSS1P07477 247 aa17.15■□□□□ 0.34
CLPTM1-201ENST00000337392 FCER1GP30273 86 aa17.15■□□□□ 0.34
CLPTM1-201ENST00000337392 TMEM61Q8N0U2 210 aa17.15■□□□□ 0.34
CLPTM1-201ENST00000337392 RBMY1A1P0DJD3 496 aaKnown RBP17.15■□□□□ 0.34
CLPTM1-201ENST00000337392 RBMY1CP0DJD4 496 aa17.15■□□□□ 0.34
CLPTM1-201ENST00000337392 DEFB131AP59861 70 aa17.15■□□□□ 0.34
CLPTM1-201ENST00000337392 RBMY1FQ15415 496 aaKnown RBP17.15■□□□□ 0.34
CLPTM1-201ENST00000337392 C7orf71A4D174 169 aa17.14■□□□□ 0.33
CLPTM1-201ENST00000337392 SMIM17P0DL12 118 aa17.14■□□□□ 0.33
CLPTM1-201ENST00000337392 SLC25A34Q6PIV7 304 aa17.14■□□□□ 0.33
CLPTM1-201ENST00000337392 Q8N1Y9 231 aa17.14■□□□□ 0.33
CLPTM1-201ENST00000337392 DEFB125Q8N687 156 aa17.14■□□□□ 0.33
CLPTM1-201ENST00000337392 FOXC2Q99958 501 aa17.14■□□□□ 0.33
CLPTM1-201ENST00000337392 DPH3P1Q9H4G8 78 aa17.13■□□□□ 0.33
CLPTM1-201ENST00000337392 BVES-AS1Q5T3Y7 98 aa17.13■□□□□ 0.33
CLPTM1-201ENST00000337392 SAMD13Q5VXD3 122 aa17.13■□□□□ 0.33
CLPTM1-201ENST00000337392 DPF1Q92782 380 aa17.13■□□□□ 0.33
CLPTM1-201ENST00000337392 C2CD3Q4AC94 2353 aa17.12■□□□□ 0.33
CLPTM1-201ENST00000337392 NUDT3O95989 172 aa17.12■□□□□ 0.33
CLPTM1-201ENST00000337392 KRTAP1-1Q07627 177 aa17.12■□□□□ 0.33
CLPTM1-201ENST00000337392 RNF152Q8N8N0 203 aa17.12■□□□□ 0.33
CLPTM1-201ENST00000337392 OR1N2Q8NGR9 330 aa17.12■□□□□ 0.33
CLPTM1-201ENST00000337392 LGALS9O00182 355 aa17.12■□□□□ 0.33
CLPTM1-201ENST00000337392 PCP2Q8IVA1 136 aa17.12■□□□□ 0.33
CLPTM1-201ENST00000337392 LINC01619G3V211 115 aa17.11■□□□□ 0.33
CLPTM1-201ENST00000337392 NMUP48645 174 aa17.11■□□□□ 0.33
CLPTM1-201ENST00000337392 LAGE3Q14657 143 aa17.11■□□□□ 0.33
CLPTM1-201ENST00000337392 Q8N2B8 174 aa17.11■□□□□ 0.33
CLPTM1-201ENST00000337392 NACAE9PAV3 2078 aa17.11■□□□□ 0.33
CLPTM1-201ENST00000337392 LGALS9BQ3B8N2 356 aa17.11■□□□□ 0.33
CLPTM1-201ENST00000337392 LGALS9CQ6DKI2 356 aa17.11■□□□□ 0.33
CLPTM1-201ENST00000337392 LINC00315P59091 139 aa17.1■□□□□ 0.33
CLPTM1-201ENST00000337392 CFAP161Q6P656 301 aa17.1■□□□□ 0.33
CLPTM1-201ENST00000337392 SMIM2Q9BVW6 85 aa17.1■□□□□ 0.33
CLPTM1-201ENST00000337392 YAE1D1Q9NRH1 226 aa17.1■□□□□ 0.33
CLPTM1-201ENST00000337392 SUMO2P61956 95 aaKnown RBP17.1■□□□□ 0.33
CLPTM1-201ENST00000337392 ODF1Q14990 250 aa17.1■□□□□ 0.33
CLPTM1-201ENST00000337392 IGKV2D-26A0A0A0MRZ7 120 aa17.09■□□□□ 0.33
CLPTM1-201ENST00000337392 F5H697 171 aa17.09■□□□□ 0.33
CLPTM1-201ENST00000337392 OR9G4Q8NGQ1 327 aa17.09■□□□□ 0.33
CLPTM1-201ENST00000337392 AP1S3Q96PC3 154 aa17.09■□□□□ 0.33
CLPTM1-201ENST00000337392 TENM1Q9UKZ4 2725 aa17.09■□□□□ 0.33
CLPTM1-201ENST00000337392 RBMY1BA6NDE4 496 aaKnown RBP17.09■□□□□ 0.33
CLPTM1-201ENST00000337392 RBMY1EA6NEQ0 496 aaKnown RBP17.09■□□□□ 0.33
CLPTM1-201ENST00000337392 J3QKU1 62 aa17.09■□□□□ 0.33
CLPTM1-201ENST00000337392 RBMY1DP0C7P1 496 aaKnown RBP17.09■□□□□ 0.33
CLPTM1-201ENST00000337392 C2orf91Q6ZV80 131 aa17.09■□□□□ 0.33
CLPTM1-201ENST00000337392 LINC01546A6NGU7 62 aa17.08■□□□□ 0.33
CLPTM1-201ENST00000337392 AMTNQ6UX39 209 aa17.08■□□□□ 0.33
CLPTM1-201ENST00000337392 KIF25-AS1Q9Y6Z4 181 aa17.08■□□□□ 0.33
CLPTM1-201ENST00000337392 CD28P10747 220 aa17.08■□□□□ 0.32
CLPTM1-201ENST00000337392 IGHV3-16A0A0C4DH30 117 aa17.07■□□□□ 0.32
CLPTM1-201ENST00000337392 MRAP2Q96G30 205 aa17.07■□□□□ 0.32
CLPTM1-201ENST00000337392 IGHV3-73A0A0B4J1V6 119 aa17.06■□□□□ 0.32
CLPTM1-201ENST00000337392 COX8AP10176 69 aa17.06■□□□□ 0.32
CLPTM1-201ENST00000337392 FGF6P10767 208 aa17.06■□□□□ 0.32
CLPTM1-201ENST00000337392 TMEM160Q9NX00 188 aa17.06■□□□□ 0.32
CLPTM1-201ENST00000337392 MRPL35Q9NZE8 188 aaKnown RBP17.06■□□□□ 0.32
CLPTM1-201ENST00000337392 NBEAL2Q6ZNJ1 2754 aa17.06■□□□□ 0.32
CLPTM1-201ENST00000337392 CD300EQ496F6 205 aaPredicted RBP17.06■□□□□ 0.32
CLPTM1-201ENST00000337392 SUMO4Q6EEV6 95 aa17.06■□□□□ 0.32
CLPTM1-201ENST00000337392 GTSCR1Q86UQ5 136 aa17.06■□□□□ 0.32
CLPTM1-201ENST00000337392 ZC2HC1BQ5TFG8 222 aa17.05■□□□□ 0.32
CLPTM1-201ENST00000337392 C4orf3Q8WVX3 66 aa17.05■□□□□ 0.32
CLPTM1-201ENST00000337392 RAX2Q96IS3 184 aa17.05■□□□□ 0.32
CLPTM1-201ENST00000337392 TRRAPQ9Y4A5 3859 aa17.05■□□□□ 0.32
CLPTM1-201ENST00000337392 TRBV7-9A0A0J9YWB2 115 aa17.04■□□□□ 0.32
CLPTM1-201ENST00000337392 IGHV1OR15-1A0A075B7D0 117 aa17.03■□□□□ 0.32
CLPTM1-201ENST00000337392 A6NJY4 79 aa17.03■□□□□ 0.32
CLPTM1-201ENST00000337392 HHLA3Q9XRX5 114 aa17.03■□□□□ 0.32
CLPTM1-201ENST00000337392 FOXI2Q6ZQN5 318 aa17.03■□□□□ 0.32
CLPTM1-201ENST00000337392 DYNLRB2Q8TF09 96 aa17.03■□□□□ 0.32
CLPTM1-201ENST00000337392 CITED2Q99967 270 aaPredicted RBP17.03■□□□□ 0.32
CLPTM1-201ENST00000337392 UFSP1Q6NVU6 142 aa17.02■□□□□ 0.32
CLPTM1-201ENST00000337392 GAGE10A6NGK3 116 aa17.01■□□□□ 0.31
CLPTM1-201ENST00000337392 PROK1P58294 105 aa17.01■□□□□ 0.31
CLPTM1-201ENST00000337392 NXPH4O95158 308 aa17■□□□□ 0.31
CLPTM1-201ENST00000337392 RPL39P62891 51 aaKnown RBP17■□□□□ 0.31
CLPTM1-201ENST00000337392 ZNF56Q15929 161 aa17■□□□□ 0.31
CLPTM1-201ENST00000337392 MED14OSP0DP75 135 aa17■□□□□ 0.31
CLPTM1-201ENST00000337392 EMP1P54849 157 aa17■□□□□ 0.31
CLPTM1-201ENST00000337392 SCGB2A2Q13296 93 aa17■□□□□ 0.31
CLPTM1-201ENST00000337392 ZNF876PQ49A33 203 aa17■□□□□ 0.31
CLPTM1-201ENST00000337392 C9orf85Q96MD7 179 aa17■□□□□ 0.31
CLPTM1-201ENST00000337392 Q9UF83 564 aa17■□□□□ 0.31
CLPTM1-201ENST00000337392 ZNF256Q9Y2P7 627 aaPredicted RBP17■□□□□ 0.31
CLPTM1-201ENST00000337392 H3BMM0 161 aa17■□□□□ 0.31
CLPTM1-201ENST00000337392 AZU1P20160 251 aa17■□□□□ 0.31
CLPTM1-201ENST00000337392 MAP6D1Q9H9H5 199 aa17■□□□□ 0.31
CLPTM1-201ENST00000337392 NSD1Q96L73 2696 aaPredicted RBP16.99■□□□□ 0.31
CLPTM1-201ENST00000337392 P0DMU3 169 aa16.99■□□□□ 0.31
CLPTM1-201ENST00000337392 FAM231AP0DMU4 169 aa16.99■□□□□ 0.31
CLPTM1-201ENST00000337392 FAM231CP0DMU5 169 aa16.99■□□□□ 0.31
CLPTM1-201ENST00000337392 DEFB114Q30KQ6 69 aa16.99■□□□□ 0.31
CLPTM1-201ENST00000337392 HIVEP1P15822 2718 aa16.99■□□□□ 0.31
CLPTM1-201ENST00000337392 A0A1B0GV72 72 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms