RNA–Protein interactions for RNA: ENST00000335922.9

FGFR1-202, Transcript of fibroblast growth factor receptor 1, humanhuman

TSL 1 (best) BASIC

Gene FGFR1, Length 4,157 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR1-202ENST00000335922 CFAP47Q6ZTR5 3102 aa11.29□□□□□ -0.6
FGFR1-202ENST00000335922 MYMXA0A1B0GTQ4 84 aa11.29□□□□□ -0.6
FGFR1-202ENST00000335922 F8VRH5 84 aa11.29□□□□□ -0.6
FGFR1-202ENST00000335922 ATXN8Q156A1 80 aa11.29□□□□□ -0.6
FGFR1-202ENST00000335922 RPL39LQ96EH5 51 aaKnown RBP11.29□□□□□ -0.6
FGFR1-202ENST00000335922 FANCD2OSQ96PS1 177 aa11.29□□□□□ -0.6
FGFR1-202ENST00000335922 TRAV13-1A0A0B4J241 112 aa11.28□□□□□ -0.6
FGFR1-202ENST00000335922 DUSP14O95147 198 aaKnown RBP11.28□□□□□ -0.6
FGFR1-202ENST00000335922 COL4A2P08572 1712 aa11.28□□□□□ -0.6
FGFR1-202ENST00000335922 CFAP46Q8IYW2 2715 aa11.28□□□□□ -0.6
FGFR1-202ENST00000335922 HELZ2Q9BYK8 2649 aaKnown RBP11.28□□□□□ -0.6
FGFR1-202ENST00000335922 TRBV20-1A0A075B6N2 111 aa11.28□□□□□ -0.6
FGFR1-202ENST00000335922 A0A1W2PPR1 153 aa11.28□□□□□ -0.6
FGFR1-202ENST00000335922 LINC01548A6NM66 108 aa11.28□□□□□ -0.6
FGFR1-202ENST00000335922 TMEM101Q96IK0 257 aa11.28□□□□□ -0.6
FGFR1-202ENST00000335922 FGF6P10767 208 aa11.28□□□□□ -0.6
FGFR1-202ENST00000335922 COPS9Q8WXC6 57 aa11.28□□□□□ -0.6
FGFR1-202ENST00000335922 SIRPDQ9H106 197 aa11.28□□□□□ -0.6
FGFR1-202ENST00000335922 Q8N9W7 124 aa11.27□□□□□ -0.6
FGFR1-202ENST00000335922 IGLV11-55A0A075B6I3 123 aa11.27□□□□□ -0.61
FGFR1-202ENST00000335922 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.27□□□□□ -0.61
FGFR1-202ENST00000335922 LINC01619G3V211 115 aa11.27□□□□□ -0.61
FGFR1-202ENST00000335922 SRSF2Q01130 221 aaKnown RBP11.27□□□□□ -0.61
FGFR1-202ENST00000335922 RBX1P62877 108 aa11.27□□□□□ -0.61
FGFR1-202ENST00000335922 SDHAF1A6NFY7 115 aa11.26□□□□□ -0.61
FGFR1-202ENST00000335922 RNASE13Q5GAN3 156 aaKnown RBP11.26□□□□□ -0.61
FGFR1-202ENST00000335922 SMIM2Q9BVW6 85 aa11.26□□□□□ -0.61
FGFR1-202ENST00000335922 KLK9Q9UKQ9 250 aa11.26□□□□□ -0.61
FGFR1-202ENST00000335922 MYCNOSP40205 109 aa11.26□□□□□ -0.61
FGFR1-202ENST00000335922 LINC00158P58513 81 aa11.26□□□□□ -0.61
FGFR1-202ENST00000335922 XCL2Q9UBD3 114 aa11.26□□□□□ -0.61
FGFR1-202ENST00000335922 PPDPFLQ8WWR9 84 aa11.26□□□□□ -0.61
FGFR1-202ENST00000335922 B5MCH6 92 aa11.25□□□□□ -0.61
FGFR1-202ENST00000335922 GATD1Q8NB37 220 aa11.25□□□□□ -0.61
FGFR1-202ENST00000335922 TIMM21Q9BVV7 248 aa11.25□□□□□ -0.61
FGFR1-202ENST00000335922 IGKV2D-26A0A0A0MRZ7 120 aa11.25□□□□□ -0.61
FGFR1-202ENST00000335922 SPINK13Q1W4C9 94 aa11.25□□□□□ -0.61
FGFR1-202ENST00000335922 C8orf31Q8N9H6 132 aa11.25□□□□□ -0.61
FGFR1-202ENST00000335922 LINC00574Q9H8X3 128 aa11.25□□□□□ -0.61
FGFR1-202ENST00000335922 RS1O15537 224 aa11.24□□□□□ -0.61
FGFR1-202ENST00000335922 IGLV2-11P01706 119 aa11.24□□□□□ -0.61
FGFR1-202ENST00000335922 C11orf71Q6IPW1 123 aa11.24□□□□□ -0.61
FGFR1-202ENST00000335922 PLEKHB2Q96CS7 222 aa11.24□□□□□ -0.61
FGFR1-202ENST00000335922 SPAG8Q99932 426 aaPredicted RBP11.24□□□□□ -0.61
FGFR1-202ENST00000335922 HIST1H4AP62805 103 aaKnown RBP11.24□□□□□ -0.61
FGFR1-202ENST00000335922 PRSS29PA6NIE9 313 aa11.24□□□□□ -0.61
FGFR1-202ENST00000335922 INAFM1C9JVW0 142 aa11.24□□□□□ -0.61
FGFR1-202ENST00000335922 IGF1P05019 195 aa11.24□□□□□ -0.61
FGFR1-202ENST00000335922 ELANEP08246 267 aa11.24□□□□□ -0.61
FGFR1-202ENST00000335922 NTN5Q8WTR8 489 aaPredicted RBP11.24□□□□□ -0.61
FGFR1-202ENST00000335922 IGHV3-16A0A0C4DH30 117 aa11.23□□□□□ -0.61
FGFR1-202ENST00000335922 INS-IGF2F8WCM5 200 aa11.23□□□□□ -0.61
FGFR1-202ENST00000335922 Q6ZQT7 251 aa11.23□□□□□ -0.61
FGFR1-202ENST00000335922 EDA2RQ9HAV5 297 aa11.23□□□□□ -0.61
FGFR1-202ENST00000335922 IGLL5B9A064 214 aa11.23□□□□□ -0.61
FGFR1-202ENST00000335922 PAX4O43316 350 aa11.23□□□□□ -0.61
FGFR1-202ENST00000335922 PRIMA1Q86XR5 153 aa11.23□□□□□ -0.61
FGFR1-202ENST00000335922 CHCHD5Q9BSY4 110 aa11.23□□□□□ -0.61
FGFR1-202ENST00000335922 PRO1854Q9UHT4 67 aa11.23□□□□□ -0.61
FGFR1-202ENST00000335922 BUB3O43684 328 aa11.22□□□□□ -0.61
FGFR1-202ENST00000335922 HOXD3P31249 432 aaPredicted RBP11.22□□□□□ -0.61
FGFR1-202ENST00000335922 SLURP1P55000 103 aa11.22□□□□□ -0.61
FGFR1-202ENST00000335922 BOD1L2Q8IYS8 172 aa11.22□□□□□ -0.61
FGFR1-202ENST00000335922 ADAMTS20P59510 1910 aa11.22□□□□□ -0.61
FGFR1-202ENST00000335922 HIST2H2BDQ6DRA6 164 aa11.22□□□□□ -0.61
FGFR1-202ENST00000335922 LOC400499M0QZD8 3231 aa11.22□□□□□ -0.61
FGFR1-202ENST00000335922 IGHV4-31P0DP07 118 aa11.22□□□□□ -0.61
FGFR1-202ENST00000335922 PMVKQ15126 192 aa11.22□□□□□ -0.61
FGFR1-202ENST00000335922 C5orf56Q8N8D9 126 aa11.22□□□□□ -0.61
FGFR1-202ENST00000335922 IGHV3-38A0A0C4DH36 116 aa11.21□□□□□ -0.61
FGFR1-202ENST00000335922 SLC25A20O43772 301 aa11.21□□□□□ -0.61
FGFR1-202ENST00000335922 ADGRG4Q8IZF6 3080 aa11.21□□□□□ -0.61
FGFR1-202ENST00000335922 WI2-2373I1.2A0A1W2PRP0 233 aa11.21□□□□□ -0.61
FGFR1-202ENST00000335922 PTH2Q96A98 100 aa11.21□□□□□ -0.61
FGFR1-202ENST00000335922 ODF1Q14990 250 aa11.21□□□□□ -0.62
FGFR1-202ENST00000335922 GAGE2AQ6NT46 116 aa11.21□□□□□ -0.62
FGFR1-202ENST00000335922 TRGV4A0A0C4DH28 118 aa11.2□□□□□ -0.62
FGFR1-202ENST00000335922 CCL24O00175 119 aa11.2□□□□□ -0.62
FGFR1-202ENST00000335922 SS18L2Q9UHA2 77 aa11.2□□□□□ -0.62
FGFR1-202ENST00000335922 PTPRBP23467 1997 aa11.2□□□□□ -0.62
FGFR1-202ENST00000335922 A0A087WX48 190 aa11.2□□□□□ -0.62
FGFR1-202ENST00000335922 TRGV1A0A0A0MS02 117 aa11.2□□□□□ -0.62
FGFR1-202ENST00000335922 TRBV12-3P01733 135 aa11.2□□□□□ -0.62
FGFR1-202ENST00000335922 LY6G5BQ8NDX9 201 aa11.2□□□□□ -0.62
FGFR1-202ENST00000335922 JPT2Q9H910 190 aa11.2□□□□□ -0.62
FGFR1-202ENST00000335922 DEFB130BP0DP73 79 aa11.2□□□□□ -0.62
FGFR1-202ENST00000335922 DEFB130AP0DP74 79 aa11.2□□□□□ -0.62
FGFR1-202ENST00000335922 ZNF48Q96MX3 618 aaPredicted RBP11.2□□□□□ -0.62
FGFR1-202ENST00000335922 SIVA1O15304 175 aa11.2□□□□□ -0.62
FGFR1-202ENST00000335922 MORN3Q6PF18 240 aaPredicted RBP11.2□□□□□ -0.62
FGFR1-202ENST00000335922 C2orf91Q6ZV80 131 aa11.2□□□□□ -0.62
FGFR1-202ENST00000335922 PCSK5Q92824 1860 aa11.19□□□□□ -0.62
FGFR1-202ENST00000335922 J3QQQ9 107 aa11.19□□□□□ -0.62
FGFR1-202ENST00000335922 NDUFA4O00483 81 aa11.19□□□□□ -0.62
FGFR1-202ENST00000335922 AJUBAQ96IF1 538 aa11.19□□□□□ -0.62
FGFR1-202ENST00000335922 USP24Q9UPU5 2620 aa11.19□□□□□ -0.62
FGFR1-202ENST00000335922 RPL39P62891 51 aaKnown RBP11.19□□□□□ -0.62
FGFR1-202ENST00000335922 FOXI2Q6ZQN5 318 aa11.19□□□□□ -0.62
FGFR1-202ENST00000335922 MAST4O15021 2626 aa11.18□□□□□ -0.62
FGFR1-202ENST00000335922 TRGV11A0A075B6L2 103 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 157.2 ms