RNA–Protein interactions for RNA: ENST00000335725.8

TDP1-201, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TDP1, Length 3,702 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-201ENST00000335725 CCL14Q16627 93 aa6.4□□□□□ -1.38
TDP1-201ENST00000335725 TMEM30BQ3MIR4 351 aa6.4□□□□□ -1.39
TDP1-201ENST00000335725 RUSC1-AS1Q66K80 236 aa6.4□□□□□ -1.39
TDP1-201ENST00000335725 PSMG3-AS1Q96PY0 264 aa6.4□□□□□ -1.39
TDP1-201ENST00000335725 IGKV2-40A0A087WW87 121 aaPredicted RBP6.39□□□□□ -1.39
TDP1-201ENST00000335725 A0A096LPE4 126 aa6.39□□□□□ -1.39
TDP1-201ENST00000335725 A0A1W2PPZ6 126 aa6.39□□□□□ -1.39
TDP1-201ENST00000335725 IGKV2D-40P01614 121 aaPredicted RBP6.39□□□□□ -1.39
TDP1-201ENST00000335725 TRBV27A0A0K0K1C4 114 aa6.39□□□□□ -1.39
TDP1-201ENST00000335725 CD164L2Q6UWJ8 174 aa6.39□□□□□ -1.39
TDP1-201ENST00000335725 SOSTDC1Q6X4U4 206 aa6.39□□□□□ -1.39
TDP1-201ENST00000335725 C11orf45Q8TAV5 145 aa6.39□□□□□ -1.39
TDP1-201ENST00000335725 LITAFQ99732 161 aa6.39□□□□□ -1.39
TDP1-201ENST00000335725 TSHBP01222 138 aa6.39□□□□□ -1.39
TDP1-201ENST00000335725 IGHV1-69P01742 117 aa6.39□□□□□ -1.39
TDP1-201ENST00000335725 IGKV1-16P04430 117 aa6.39□□□□□ -1.39
TDP1-201ENST00000335725 CD59P13987 128 aa6.39□□□□□ -1.39
TDP1-201ENST00000335725 KHDC1LQ5JSQ8 128 aa6.39□□□□□ -1.39
TDP1-201ENST00000335725 C1orf229Q6ZS94 237 aaPredicted RBP6.39□□□□□ -1.39
TDP1-201ENST00000335725 DEFB126Q9BYW3 111 aa6.39□□□□□ -1.39
TDP1-201ENST00000335725 PVRIGQ6DKI7 326 aa6.38□□□□□ -1.39
TDP1-201ENST00000335725 Q8N2B8 174 aa6.38□□□□□ -1.39
TDP1-201ENST00000335725 CCDC140Q96MF4 163 aa6.38□□□□□ -1.39
TDP1-201ENST00000335725 C6orf223Q8N319 242 aa6.38□□□□□ -1.39
TDP1-201ENST00000335725 RMI2Q96E14 147 aa6.38□□□□□ -1.39
TDP1-201ENST00000335725 SPRR3Q9UBC9 169 aa6.38□□□□□ -1.39
TDP1-201ENST00000335725 RP1P56715 2156 aa6.38□□□□□ -1.39
TDP1-201ENST00000335725 H3BS24 57 aa6.38□□□□□ -1.39
TDP1-201ENST00000335725 NDUFS5O43920 106 aa6.38□□□□□ -1.39
TDP1-201ENST00000335725 HOXD3P31249 432 aaPredicted RBP6.38□□□□□ -1.39
TDP1-201ENST00000335725 CXXC4Q9H2H0 198 aa6.38□□□□□ -1.39
TDP1-201ENST00000335725 IGLV3-19P01714 112 aa6.37□□□□□ -1.39
TDP1-201ENST00000335725 IGF1P05019 195 aa6.37□□□□□ -1.39
TDP1-201ENST00000335725 CFHR1Q03591 330 aa6.37□□□□□ -1.39
TDP1-201ENST00000335725 BPESC1Q9GZL8 116 aa6.37□□□□□ -1.39
TDP1-201ENST00000335725 C14orf132Q9NPU4 83 aa6.37□□□□□ -1.39
TDP1-201ENST00000335725 SNURFQ9Y675 71 aa6.37□□□□□ -1.39
TDP1-201ENST00000335725 CENPFP49454 3210 aa6.37□□□□□ -1.39
TDP1-201ENST00000335725 POLEQ07864 2286 aa6.37□□□□□ -1.39
TDP1-201ENST00000335725 GRNP28799 593 aaKnown RBP6.37□□□□□ -1.39
TDP1-201ENST00000335725 ZNF575Q86XF7 245 aa6.37□□□□□ -1.39
TDP1-201ENST00000335725 Q8TAT8 98 aa6.37□□□□□ -1.39
TDP1-201ENST00000335725 NDUFA12Q9UI09 145 aa6.37□□□□□ -1.39
TDP1-201ENST00000335725 ADARB2-AS1A8MUL3 147 aa6.37□□□□□ -1.39
TDP1-201ENST00000335725 H0Y8X5 98 aa6.37□□□□□ -1.39
TDP1-201ENST00000335725 RAI1Q7Z5J4 1906 aaPredicted RBP6.36□□□□□ -1.39
TDP1-201ENST00000335725 IGHV5-51A0A0C4DH38 117 aa6.36□□□□□ -1.39
TDP1-201ENST00000335725 Q6ZSV7 163 aa6.36□□□□□ -1.39
TDP1-201ENST00000335725 PDE4DIPQ5VU43 2346 aa6.36□□□□□ -1.39
TDP1-201ENST00000335725 LTBP2Q14767 1821 aa6.36□□□□□ -1.39
TDP1-201ENST00000335725 IGHV3-64DA0A0J9YX35 117 aa6.36□□□□□ -1.39
TDP1-201ENST00000335725 VCYO14598 125 aa6.36□□□□□ -1.39
TDP1-201ENST00000335725 IGHV3-9P01782 118 aa6.36□□□□□ -1.39
TDP1-201ENST00000335725 IGHV3-30-3P0DP02 117 aa6.36□□□□□ -1.39
TDP1-201ENST00000335725 HCP5Q6MZN7 132 aa6.36□□□□□ -1.39
TDP1-201ENST00000335725 C11orf44Q8N8P7 122 aa6.36□□□□□ -1.39
TDP1-201ENST00000335725 C22orf24Q9Y442 160 aa6.36□□□□□ -1.39
TDP1-201ENST00000335725 IGHV3-64A0A075B6Q5 118 aa6.36□□□□□ -1.39
TDP1-201ENST00000335725 ZNHIT1O43257 154 aa6.36□□□□□ -1.39
TDP1-201ENST00000335725 MIFP14174 115 aa6.36□□□□□ -1.39
TDP1-201ENST00000335725 LEAP2Q969E1 77 aa6.36□□□□□ -1.39
TDP1-201ENST00000335725 PI4KAP42356 2102 aa6.35□□□□□ -1.39
TDP1-201ENST00000335725 VMO1Q7Z5L0 202 aa6.35□□□□□ -1.39
TDP1-201ENST00000335725 OBSCN-AS1Q96MR7 158 aa6.35□□□□□ -1.39
TDP1-201ENST00000335725 UBL5Q9BZL1 73 aa6.35□□□□□ -1.39
TDP1-201ENST00000335725 DSCAMO60469 2012 aa6.35□□□□□ -1.39
TDP1-201ENST00000335725 ENHOQ6UWT2 76 aa6.35□□□□□ -1.39
TDP1-201ENST00000335725 IGKV3D-20A0A0C4DH25 116 aa6.35□□□□□ -1.39
TDP1-201ENST00000335725 IGHV7-4-1A0A0J9YVY3 117 aa6.35□□□□□ -1.39
TDP1-201ENST00000335725 VPREB1P12018 145 aa6.35□□□□□ -1.39
TDP1-201ENST00000335725 Q6ZS52 159 aa6.35□□□□□ -1.39
TDP1-201ENST00000335725 RPL39LQ96EH5 51 aaKnown RBP6.35□□□□□ -1.39
TDP1-201ENST00000335725 UBE2L6O14933 153 aa6.34□□□□□ -1.39
TDP1-201ENST00000335725 LHBP01229 141 aa6.34□□□□□ -1.39
TDP1-201ENST00000335725 C10orf55Q5SWW7 151 aa6.34□□□□□ -1.39
TDP1-201ENST00000335725 CXorf67Q86X51 503 aaPredicted RBP6.34□□□□□ -1.39
TDP1-201ENST00000335725 MGPP08493 103 aa6.34□□□□□ -1.39
TDP1-201ENST00000335725 UBE2BP63146 152 aa6.34□□□□□ -1.39
TDP1-201ENST00000335725 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.34□□□□□ -1.39
TDP1-201ENST00000335725 FREM1Q5H8C1 2179 aa6.34□□□□□ -1.39
TDP1-201ENST00000335725 IGHV5-10-1A0A0J9YXX1 117 aa6.33□□□□□ -1.4
TDP1-201ENST00000335725 SPRY3O43610 288 aa6.33□□□□□ -1.4
TDP1-201ENST00000335725 RPL27AP46776 148 aaKnown RBP6.33□□□□□ -1.4
TDP1-201ENST00000335725 Q1T7F1 81 aa6.33□□□□□ -1.4
TDP1-201ENST00000335725 IGHV3-21A0A0B4J1V1 117 aa6.33□□□□□ -1.4
TDP1-201ENST00000335725 TFF1P04155 84 aa6.33□□□□□ -1.4
TDP1-201ENST00000335725 CGB3P0DN86 165 aa6.33□□□□□ -1.4
TDP1-201ENST00000335725 CGB7P0DN87 165 aa6.33□□□□□ -1.4
TDP1-201ENST00000335725 C17orf58Q2M2W7 97 aa6.33□□□□□ -1.4
TDP1-201ENST00000335725 DEFB127Q9H1M4 99 aa6.33□□□□□ -1.4
TDP1-201ENST00000335725 TNCP24821 2201 aa6.33□□□□□ -1.4
TDP1-201ENST00000335725 PCNX2A6NKB5 2137 aa6.33□□□□□ -1.4
TDP1-201ENST00000335725 RNASE4P34096 147 aaKnown RBP6.33□□□□□ -1.4
TDP1-201ENST00000335725 FAM229BQ4G0N7 80 aa6.33□□□□□ -1.4
TDP1-201ENST00000335725 ZNF833PQ6ZTB9 187 aa6.33□□□□□ -1.4
TDP1-201ENST00000335725 NOTCH4Q99466 2003 aa6.32□□□□□ -1.4
TDP1-201ENST00000335725 PRB4P10163 310 aaPredicted RBP6.32□□□□□ -1.4
TDP1-201ENST00000335725 PHLDA3Q9Y5J5 127 aa6.32□□□□□ -1.4
TDP1-201ENST00000335725 IGKV3D-15A0A087WSY6 115 aa6.32□□□□□ -1.4
TDP1-201ENST00000335725 F6UB75 175 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 96.5 ms