RNA–Protein interactions for RNA: ENST00000334668.8

HLA-F-217, Transcript of major histocompatibility complex, class I, F, humanhuman

APPRIS ALT2 BASIC

Gene HLA-F, Length 1,283 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-217ENST00000334668 M0R381 172 aa12.64□□□□□ -0.39
HLA-F-217ENST00000334668 RHODO00212 210 aa12.64□□□□□ -0.39
HLA-F-217ENST00000334668 P01737 135 aa12.64□□□□□ -0.39
HLA-F-217ENST00000334668 CRYGDP07320 174 aa12.64□□□□□ -0.39
HLA-F-217ENST00000334668 IGLC6P0CF74 106 aa12.64□□□□□ -0.39
HLA-F-217ENST00000334668 SRIP30626 198 aa12.64□□□□□ -0.39
HLA-F-217ENST00000334668 RHOHQ15669 191 aa12.64□□□□□ -0.39
HLA-F-217ENST00000334668 LYPD5Q6UWN5 251 aa12.64□□□□□ -0.39
HLA-F-217ENST00000334668 Q6ZSN1 163 aa12.64□□□□□ -0.39
HLA-F-217ENST00000334668 NUDT10Q8NFP7 164 aa12.64□□□□□ -0.39
HLA-F-217ENST00000334668 OR2D3Q8NGH3 330 aa12.64□□□□□ -0.39
HLA-F-217ENST00000334668 OR10AG1Q8NH19 301 aa12.64□□□□□ -0.39
HLA-F-217ENST00000334668 NUDT11Q96G61 164 aa12.64□□□□□ -0.39
HLA-F-217ENST00000334668 SH2D6Q7Z4S9 175 aa12.63□□□□□ -0.39
HLA-F-217ENST00000334668 PRADC1Q9BSG0 188 aa12.63□□□□□ -0.39
HLA-F-217ENST00000334668 MRPL18Q9H0U6 180 aaKnown RBP12.63□□□□□ -0.39
HLA-F-217ENST00000334668 Q9H8V8 135 aa12.63□□□□□ -0.39
HLA-F-217ENST00000334668 M0R2N4 97 aa12.62□□□□□ -0.39
HLA-F-217ENST00000334668 GZMBP10144 247 aa12.62□□□□□ -0.39
HLA-F-217ENST00000334668 EPPK1P58107 5090 aaKnown RBP12.62□□□□□ -0.39
HLA-F-217ENST00000334668 FAT2Q9NYQ8 4349 aa12.61□□□□□ -0.39
HLA-F-217ENST00000334668 NBDYA0A0U1RRE5 68 aa12.61□□□□□ -0.39
HLA-F-217ENST00000334668 XKRY2A2RUG3 117 aa12.61□□□□□ -0.39
HLA-F-217ENST00000334668 TIRAPP58753 221 aa12.61□□□□□ -0.39
HLA-F-217ENST00000334668 SMIM7Q9BQ49 75 aa12.61□□□□□ -0.39
HLA-F-217ENST00000334668 CEBPGP53567 150 aa12.6□□□□□ -0.39
HLA-F-217ENST00000334668 FAM231DQ6ZW35 169 aa12.6□□□□□ -0.39
HLA-F-217ENST00000334668 FER1L6-AS1Q8NA97 138 aa12.6□□□□□ -0.39
HLA-F-217ENST00000334668 RNASE7Q9H1E1 156 aaKnown RBP12.6□□□□□ -0.39
HLA-F-217ENST00000334668 SMDT1Q9H4I9 107 aa12.6□□□□□ -0.39
HLA-F-217ENST00000334668 A0A087WWL8 130 aa12.59□□□□□ -0.39
HLA-F-217ENST00000334668 C9JQL5 133 aa12.59□□□□□ -0.39
HLA-F-217ENST00000334668 LINC00694P0DN24 101 aa12.59□□□□□ -0.39
HLA-F-217ENST00000334668 SPANXN1Q5VSR9 72 aa12.59□□□□□ -0.39
HLA-F-217ENST00000334668 C14orf178Q8N769 122 aaPredicted RBP12.59□□□□□ -0.39
HLA-F-217ENST00000334668 RPP21Q9H633 154 aaKnown RBP12.59□□□□□ -0.39
HLA-F-217ENST00000334668 MUC21A0A0G2JKD1 596 aa12.58□□□□□ -0.4
HLA-F-217ENST00000334668 MUC21A0A140T8X8 626 aa12.58□□□□□ -0.4
HLA-F-217ENST00000334668 A0A1W2PPQ1 181 aa12.58□□□□□ -0.4
HLA-F-217ENST00000334668 F2Z2F3 143 aa12.58□□□□□ -0.4
HLA-F-217ENST00000334668 SRSF3P84103 164 aaKnown RBP12.58□□□□□ -0.4
HLA-F-217ENST00000334668 FAM74A4Q5TZK3 123 aa12.58□□□□□ -0.4
HLA-F-217ENST00000334668 LINC01551Q86U37 167 aa12.58□□□□□ -0.4
HLA-F-217ENST00000334668 Q9UF83 564 aa12.58□□□□□ -0.4
HLA-F-217ENST00000334668 ZNF727A8MUV8 499 aa12.57□□□□□ -0.4
HLA-F-217ENST00000334668 RTL8CO15255 209 aa12.57□□□□□ -0.4
HLA-F-217ENST00000334668 PEA15Q15121 130 aa12.57□□□□□ -0.4
HLA-F-217ENST00000334668 WDR73Q6P4I2 378 aa12.57□□□□□ -0.4
HLA-F-217ENST00000334668 KIF25-AS1Q9Y6Z4 181 aa12.57□□□□□ -0.4
HLA-F-217ENST00000334668 SIVA1O15304 175 aa12.56□□□□□ -0.4
HLA-F-217ENST00000334668 CTRLP40313 264 aa12.56□□□□□ -0.4
HLA-F-217ENST00000334668 CACNG7P62955 275 aa12.56□□□□□ -0.4
HLA-F-217ENST00000334668 FAM74A3Q4VXF1 159 aa12.56□□□□□ -0.4
HLA-F-217ENST00000334668 CNFNQ9BYD5 112 aa12.56□□□□□ -0.4
HLA-F-217ENST00000334668 KRTAP1-5Q9BYS1 174 aa12.56□□□□□ -0.4
HLA-F-217ENST00000334668 HECTD4Q9Y4D8 3996 aa12.56□□□□□ -0.4
HLA-F-217ENST00000334668 LINC00315P59091 139 aa12.55□□□□□ -0.4
HLA-F-217ENST00000334668 RAB4BP61018 213 aa12.55□□□□□ -0.4
HLA-F-217ENST00000334668 TTC32Q5I0X7 151 aa12.55□□□□□ -0.4
HLA-F-217ENST00000334668 LYZL1Q6UWQ5 148 aa12.55□□□□□ -0.4
HLA-F-217ENST00000334668 LINC00336Q6ZUF6 198 aa12.55□□□□□ -0.4
HLA-F-217ENST00000334668 TRBV10-1A0A0K0K1A3 114 aa12.54□□□□□ -0.4
HLA-F-217ENST00000334668 GATCO43716 136 aaKnown RBP12.54□□□□□ -0.4
HLA-F-217ENST00000334668 CT83Q5H943 113 aa12.54□□□□□ -0.4
HLA-F-217ENST00000334668 C1orf134Q5TEV5 83 aa12.54□□□□□ -0.4
HLA-F-217ENST00000334668 ATP6V0E2Q8NHE4 81 aa12.54□□□□□ -0.4
HLA-F-217ENST00000334668 AP1S3Q96PC3 154 aa12.54□□□□□ -0.4
HLA-F-217ENST00000334668 TPPP3Q9BW30 176 aa12.54□□□□□ -0.4
HLA-F-217ENST00000334668 MSRB1Q9NZV6 116 aa12.54□□□□□ -0.4
HLA-F-217ENST00000334668 TMEM241Q24JQ0 296 aa12.53□□□□□ -0.4
HLA-F-217ENST00000334668 GTSF1Q8WW33 167 aa12.53□□□□□ -0.4
HLA-F-217ENST00000334668 GTSF1LQ9H1H1 148 aa12.53□□□□□ -0.4
HLA-F-217ENST00000334668 OSTCQ9NRP0 149 aa12.53□□□□□ -0.4
HLA-F-217ENST00000334668 GAGE12JA6NER3 117 aa12.52□□□□□ -0.41
HLA-F-217ENST00000334668 A8MWL6 223 aa12.52□□□□□ -0.41
HLA-F-217ENST00000334668 BTF3P20290 206 aaKnown RBP12.52□□□□□ -0.41
HLA-F-217ENST00000334668 FOXA3P55318 350 aaPredicted RBP12.52□□□□□ -0.41
HLA-F-217ENST00000334668 ERVFC1-1P60608 527 aa12.52□□□□□ -0.41
HLA-F-217ENST00000334668 SSTP61278 116 aa12.52□□□□□ -0.41
HLA-F-217ENST00000334668 IFITM2Q01629 132 aa12.52□□□□□ -0.41
HLA-F-217ENST00000334668 GAGE1Q13065 139 aa12.52□□□□□ -0.41
HLA-F-217ENST00000334668 GAGE4Q13068 117 aa12.52□□□□□ -0.41
HLA-F-217ENST00000334668 GAGE5Q13069 117 aa12.52□□□□□ -0.41
HLA-F-217ENST00000334668 GAGE13Q4V321 117 aa12.52□□□□□ -0.41
HLA-F-217ENST00000334668 WFDC10BQ8IUB3 73 aa12.52□□□□□ -0.41
HLA-F-217ENST00000334668 OR10G8Q8NGN5 311 aa12.52□□□□□ -0.41
HLA-F-217ENST00000334668 DNAH10OSP0CZ25 163 aa12.51□□□□□ -0.41
HLA-F-217ENST00000334668 NTF3P20783 257 aa12.51□□□□□ -0.41
HLA-F-217ENST00000334668 RAB14P61106 215 aa12.51□□□□□ -0.41
HLA-F-217ENST00000334668 LELP1Q5T871 98 aa12.51□□□□□ -0.41
HLA-F-217ENST00000334668 C6orf223Q8N319 242 aa12.51□□□□□ -0.41
HLA-F-217ENST00000334668 SMIM17P0DL12 118 aa12.5□□□□□ -0.41
HLA-F-217ENST00000334668 RPL23P62829 140 aaKnown RBP12.5□□□□□ -0.41
HLA-F-217ENST00000334668 ZNF56Q15929 161 aa12.5□□□□□ -0.41
HLA-F-217ENST00000334668 SOHLH1Q5JUK2 328 aa12.5□□□□□ -0.41
HLA-F-217ENST00000334668 CLLU1Q5K131 121 aa12.5□□□□□ -0.41
HLA-F-217ENST00000334668 ISOC2Q96AB3 205 aa12.5□□□□□ -0.41
HLA-F-217ENST00000334668 NAT8Q9UHE5 227 aa12.5□□□□□ -0.41
HLA-F-217ENST00000334668 TRBV7-3A0A075B6L6 115 aa12.49□□□□□ -0.41
HLA-F-217ENST00000334668 K7EP13 123 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 92.1 ms