RNA–Protein interactions for RNA: ENST00000329397.5

PTP4A3-201, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTP4A3, Length 2,785 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-201ENST00000329397 ORMDL2Q53FV1 153 aa13.07□□□□□ -0.32
PTP4A3-201ENST00000329397 HLA-DRB4X5D2U9 266 aa13.07□□□□□ -0.32
PTP4A3-201ENST00000329397 PLEKHB2Q96CS7 222 aa13.06□□□□□ -0.32
PTP4A3-201ENST00000329397 SPATA25Q9BR10 227 aa13.06□□□□□ -0.32
PTP4A3-201ENST00000329397 PRADC1Q9BSG0 188 aa13.06□□□□□ -0.32
PTP4A3-201ENST00000329397 TRBV7-3A0A075B6L6 115 aa13.06□□□□□ -0.32
PTP4A3-201ENST00000329397 MYMXA0A1B0GTQ4 84 aa13.06□□□□□ -0.32
PTP4A3-201ENST00000329397 NDUFA4O00483 81 aa13.06□□□□□ -0.32
PTP4A3-201ENST00000329397 UCNP55089 124 aa13.06□□□□□ -0.32
PTP4A3-201ENST00000329397 RPL39P62891 51 aaKnown RBP13.05□□□□□ -0.32
PTP4A3-201ENST00000329397 OVOL1O14753 267 aa13.05□□□□□ -0.32
PTP4A3-201ENST00000329397 LGALS1P09382 135 aaKnown RBP13.05□□□□□ -0.32
PTP4A3-201ENST00000329397 GNLYP22749 145 aa13.05□□□□□ -0.32
PTP4A3-201ENST00000329397 SLC25A16P16260 332 aa13.04□□□□□ -0.32
PTP4A3-201ENST00000329397 ETDBQ3ZM63 59 aa13.04□□□□□ -0.32
PTP4A3-201ENST00000329397 FAM74A4Q5TZK3 123 aa13.04□□□□□ -0.32
PTP4A3-201ENST00000329397 C10orf99Q6UWK7 81 aa13.04□□□□□ -0.32
PTP4A3-201ENST00000329397 FOXI2Q6ZQN5 318 aa13.04□□□□□ -0.32
PTP4A3-201ENST00000329397 ZNF418Q8TF45 676 aaPredicted RBP13.04□□□□□ -0.32
PTP4A3-201ENST00000329397 LENEPQ9Y5L5 61 aa13.04□□□□□ -0.32
PTP4A3-201ENST00000329397 TRAV12-1A0A0B4J245 112 aa13.03□□□□□ -0.32
PTP4A3-201ENST00000329397 TRAV12-3A0A0B4J271 114 aa13.03□□□□□ -0.32
PTP4A3-201ENST00000329397 PSMG4Q5JS54 123 aa13.03□□□□□ -0.32
PTP4A3-201ENST00000329397 MYO18BQ8IUG5 2567 aa13.03□□□□□ -0.32
PTP4A3-201ENST00000329397 ZNF815PA8K554 130 aa13.03□□□□□ -0.32
PTP4A3-201ENST00000329397 F5H697 171 aa13.03□□□□□ -0.32
PTP4A3-201ENST00000329397 SCGB1D4Q6XE38 83 aa13.03□□□□□ -0.32
PTP4A3-201ENST00000329397 TP53TG1Q9Y2A0 90 aa13.03□□□□□ -0.32
PTP4A3-201ENST00000329397 TRAV12-2A0A075B6T6 113 aa13.02□□□□□ -0.32
PTP4A3-201ENST00000329397 TSHBP01222 138 aa13.02□□□□□ -0.32
PTP4A3-201ENST00000329397 C20orf78Q9BR46 151 aa13.02□□□□□ -0.32
PTP4A3-201ENST00000329397 CRYGDP07320 174 aa13.02□□□□□ -0.33
PTP4A3-201ENST00000329397 CD7P09564 240 aa13.01□□□□□ -0.33
PTP4A3-201ENST00000329397 FAM19A4Q96LR4 140 aa13.01□□□□□ -0.33
PTP4A3-201ENST00000329397 CACNA1AO00555 2505 aa13.01□□□□□ -0.33
PTP4A3-201ENST00000329397 C11orf86A6NJI1 115 aa13.01□□□□□ -0.33
PTP4A3-201ENST00000329397 INSL3P51460 131 aa13.01□□□□□ -0.33
PTP4A3-201ENST00000329397 LINC00315P59091 139 aa13.01□□□□□ -0.33
PTP4A3-201ENST00000329397 PIMREGQ9BSJ6 248 aa13.01□□□□□ -0.33
PTP4A3-201ENST00000329397 IGHG2P01859 326 aa13□□□□□ -0.33
PTP4A3-201ENST00000329397 RRN3P1Q2M238 152 aa13□□□□□ -0.33
PTP4A3-201ENST00000329397 PIEZO1Q92508 2521 aa13□□□□□ -0.33
PTP4A3-201ENST00000329397 ZNF688P0C7X2 276 aa13□□□□□ -0.33
PTP4A3-201ENST00000329397 SUMO4Q6EEV6 95 aa13□□□□□ -0.33
PTP4A3-201ENST00000329397 MORN3Q6PF18 240 aaPredicted RBP13□□□□□ -0.33
PTP4A3-201ENST00000329397 SPANXB1Q9NS25 103 aaPredicted RBP13□□□□□ -0.33
PTP4A3-201ENST00000329397 CSDC2Q9Y534 153 aaKnown RBP13□□□□□ -0.33
PTP4A3-201ENST00000329397 IGHV4-30-2A0A087WSY4 118 aa12.99□□□□□ -0.33
PTP4A3-201ENST00000329397 AVPP01185 164 aa12.99□□□□□ -0.33
PTP4A3-201ENST00000329397 FAM159AQ6UWV7 190 aa12.99□□□□□ -0.33
PTP4A3-201ENST00000329397 ZFYVE26Q68DK2 2539 aa12.99□□□□□ -0.33
PTP4A3-201ENST00000329397 FAM208BQ5VWN6 2430 aa12.99□□□□□ -0.33
PTP4A3-201ENST00000329397 DAZ1Q9NQZ3 744 aaKnown RBP12.99□□□□□ -0.33
PTP4A3-201ENST00000329397 ZNF256Q9Y2P7 627 aaPredicted RBP12.99□□□□□ -0.33
PTP4A3-201ENST00000329397 KIF25-AS1Q9Y6Z4 181 aa12.99□□□□□ -0.33
PTP4A3-201ENST00000329397 CRIP2P52943 208 aaPredicted RBP12.98□□□□□ -0.33
PTP4A3-201ENST00000329397 TAL2Q16559 108 aa12.98□□□□□ -0.33
PTP4A3-201ENST00000329397 PTH2Q96A98 100 aa12.98□□□□□ -0.33
PTP4A3-201ENST00000329397 OPRPNQ99935 248 aaPredicted RBP12.98□□□□□ -0.33
PTP4A3-201ENST00000329397 ANAPC13Q9BS18 74 aa12.98□□□□□ -0.33
PTP4A3-201ENST00000329397 MXRA5Q9NR99 2828 aa12.98□□□□□ -0.33
PTP4A3-201ENST00000329397 ACACBO00763 2458 aa12.98□□□□□ -0.33
PTP4A3-201ENST00000329397 WIPF1O43516 503 aa12.98□□□□□ -0.33
PTP4A3-201ENST00000329397 APOMO95445 188 aa12.98□□□□□ -0.33
PTP4A3-201ENST00000329397 SRSF9Q13242 221 aaKnown RBP eCLIP12.98□□□□□ -0.33
PTP4A3-201ENST00000329397 IGLV4-69A0A075B6H9 119 aa12.98□□□□□ -0.33
PTP4A3-201ENST00000329397 NRGNQ92686 78 aa12.98□□□□□ -0.33
PTP4A3-201ENST00000329397 C1QTNF4Q9BXJ3 329 aa12.98□□□□□ -0.33
PTP4A3-201ENST00000329397 MDFICQ9P1T7 246 aa12.98□□□□□ -0.33
PTP4A3-201ENST00000329397 MYO9AB2RTY4 2548 aa12.97□□□□□ -0.33
PTP4A3-201ENST00000329397 A6NDX4 124 aa12.97□□□□□ -0.33
PTP4A3-201ENST00000329397 LINC01549A6NIU2 74 aa12.97□□□□□ -0.33
PTP4A3-201ENST00000329397 ZFP2Q6ZN57 461 aa12.97□□□□□ -0.33
PTP4A3-201ENST00000329397 TSPEAR-AS2P59090 65 aa12.97□□□□□ -0.33
PTP4A3-201ENST00000329397 USMG5Q96IX5 58 aa12.97□□□□□ -0.33
PTP4A3-201ENST00000329397 ANKRD17O75179 2603 aaKnown RBP12.96□□□□□ -0.33
PTP4A3-201ENST00000329397 NOTCH3Q9UM47 2321 aa12.96□□□□□ -0.34
PTP4A3-201ENST00000329397 SDHAF1A6NFY7 115 aa12.96□□□□□ -0.34
PTP4A3-201ENST00000329397 HOXA3O43365 443 aaPredicted RBP12.96□□□□□ -0.34
PTP4A3-201ENST00000329397 DUX5Q96PT3 197 aa12.96□□□□□ -0.34
PTP4A3-201ENST00000329397 CCL19Q99731 98 aa12.96□□□□□ -0.34
PTP4A3-201ENST00000329397 TLN2Q9Y4G6 2542 aa12.96□□□□□ -0.34
PTP4A3-201ENST00000329397 COX6B1P14854 86 aa12.95□□□□□ -0.34
PTP4A3-201ENST00000329397 GAGE13Q4V321 117 aa12.95□□□□□ -0.34
PTP4A3-201ENST00000329397 TMEM170BQ5T4T1 132 aa12.95□□□□□ -0.34
PTP4A3-201ENST00000329397 DCANP1Q8TF63 244 aa12.95□□□□□ -0.34
PTP4A3-201ENST00000329397 SPAG8Q99932 426 aaPredicted RBP12.95□□□□□ -0.34
PTP4A3-201ENST00000329397 LOC107984156A0A0G2JMH3 177 aa12.95□□□□□ -0.34
PTP4A3-201ENST00000329397 KLLNB2CW77 178 aa12.95□□□□□ -0.34
PTP4A3-201ENST00000329397 APRG1Q8IVJ8 170 aa12.95□□□□□ -0.34
PTP4A3-201ENST00000329397 ARL17AQ8IVW1 177 aa12.95□□□□□ -0.34
PTP4A3-201ENST00000329397 DOPEY1Q5JWR5 2465 aa12.95□□□□□ -0.34
PTP4A3-201ENST00000329397 IGHV3-64A0A075B6Q5 118 aa12.94□□□□□ -0.34
PTP4A3-201ENST00000329397 IGIPA6NJ69 53 aa12.94□□□□□ -0.34
PTP4A3-201ENST00000329397 F8W1H4 67 aa12.94□□□□□ -0.34
PTP4A3-201ENST00000329397 SPINK8P0C7L1 97 aa12.93□□□□□ -0.34
PTP4A3-201ENST00000329397 ZNRF2Q8NHG8 242 aa12.93□□□□□ -0.34
PTP4A3-201ENST00000329397 C10orf105Q8TEF2 133 aa12.93□□□□□ -0.34
PTP4A3-201ENST00000329397 PRO0461Q9UI25 63 aa12.93□□□□□ -0.34
PTP4A3-201ENST00000329397 IGLV1-40P01703 118 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms