RNA–Protein interactions for RNA: ENST00000326427.10

ITM2C-202, Transcript of integral membrane protein 2C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ITM2C, Length 2,078 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITM2C-202ENST00000326427 SDHAF1A6NFY7 115 aa16.36■□□□□ 0.21
ITM2C-202ENST00000326427 ZNF688P0C7X2 276 aa16.36■□□□□ 0.21
ITM2C-202ENST00000326427 F5H697 171 aa16.36■□□□□ 0.21
ITM2C-202ENST00000326427 K7EQG2 157 aa16.36■□□□□ 0.21
ITM2C-202ENST00000326427 DEFB112Q30KQ8 113 aa16.36■□□□□ 0.21
ITM2C-202ENST00000326427 DSCR9P59020 149 aa16.35■□□□□ 0.21
ITM2C-202ENST00000326427 SNRPD3P62318 126 aaKnown RBP16.35■□□□□ 0.21
ITM2C-202ENST00000326427 RPL39P62891 51 aaKnown RBP16.35■□□□□ 0.21
ITM2C-202ENST00000326427 SCGB2A2Q13296 93 aa16.35■□□□□ 0.21
ITM2C-202ENST00000326427 C10orf99Q6UWK7 81 aa16.35■□□□□ 0.21
ITM2C-202ENST00000326427 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP16.35■□□□□ 0.21
ITM2C-202ENST00000326427 CACNA1AO00555 2505 aa16.35■□□□□ 0.21
ITM2C-202ENST00000326427 TEX48A0A1B0GUV7 120 aa16.34■□□□□ 0.21
ITM2C-202ENST00000326427 HERVK_113P61574 105 aa16.34■□□□□ 0.21
ITM2C-202ENST00000326427 MORN3Q6PF18 240 aaPredicted RBP16.34■□□□□ 0.21
ITM2C-202ENST00000326427 SYT8Q8NBV8 401 aa16.34■□□□□ 0.21
ITM2C-202ENST00000326427 PLEKHB2Q96CS7 222 aa16.34■□□□□ 0.21
ITM2C-202ENST00000326427 MDFICQ9P1T7 246 aa16.34■□□□□ 0.21
ITM2C-202ENST00000326427 RPL24P83731 157 aaKnown RBP16.33■□□□□ 0.21
ITM2C-202ENST00000326427 CD300EQ496F6 205 aaPredicted RBP16.33■□□□□ 0.21
ITM2C-202ENST00000326427 HOXA3O43365 443 aaPredicted RBP16.33■□□□□ 0.2
ITM2C-202ENST00000326427 SCGB1D4Q6XE38 83 aa16.33■□□□□ 0.2
ITM2C-202ENST00000326427 TMEM238LA0A1B0GVL6 79 aa16.32■□□□□ 0.2
ITM2C-202ENST00000326427 A6NJY4 79 aa16.32■□□□□ 0.2
ITM2C-202ENST00000326427 M0QY20 66 aa16.32■□□□□ 0.2
ITM2C-202ENST00000326427 Q8N1Y9 231 aa16.32■□□□□ 0.2
ITM2C-202ENST00000326427 TRAV12-2A0A075B6T6 113 aa16.31■□□□□ 0.2
ITM2C-202ENST00000326427 H3BMG7 143 aa16.31■□□□□ 0.2
ITM2C-202ENST00000326427 IGHV1OR15-1A0A075B7D0 117 aa16.31■□□□□ 0.2
ITM2C-202ENST00000326427 UBE2D1P51668 147 aa16.31■□□□□ 0.2
ITM2C-202ENST00000326427 ZNF876PQ49A33 203 aa16.31■□□□□ 0.2
ITM2C-202ENST00000326427 FAM74A4Q5TZK3 123 aa16.31■□□□□ 0.2
ITM2C-202ENST00000326427 KLHL30-AS1Q8NEE0 82 aa16.31■□□□□ 0.2
ITM2C-202ENST00000326427 SPANXB1Q9NS25 103 aaPredicted RBP16.31■□□□□ 0.2
ITM2C-202ENST00000326427 WFDC2Q14508 124 aa16.3■□□□□ 0.2
ITM2C-202ENST00000326427 NSUN5P1Q3KNT7 163 aa16.3■□□□□ 0.2
ITM2C-202ENST00000326427 RNF152Q8N8N0 203 aa16.3■□□□□ 0.2
ITM2C-202ENST00000326427 LINC01356Q8N9X3 169 aa16.3■□□□□ 0.2
ITM2C-202ENST00000326427 EMP1P54849 157 aa16.3■□□□□ 0.2
ITM2C-202ENST00000326427 RHOHQ15669 191 aa16.3■□□□□ 0.2
ITM2C-202ENST00000326427 DEFB104AQ8WTQ1 72 aa16.3■□□□□ 0.2
ITM2C-202ENST00000326427 IGKV3-20P01619 116 aa16.29■□□□□ 0.2
ITM2C-202ENST00000326427 PRO0461Q9UI25 63 aa16.29■□□□□ 0.2
ITM2C-202ENST00000326427 A0A0J9YY99 117 aa16.28■□□□□ 0.2
ITM2C-202ENST00000326427 ZNF56Q15929 161 aa16.28■□□□□ 0.2
ITM2C-202ENST00000326427 AMTNQ6UX39 209 aa16.28■□□□□ 0.2
ITM2C-202ENST00000326427 SRSF9Q13242 221 aaKnown RBP eCLIP16.28■□□□□ 0.2
ITM2C-202ENST00000326427 SPINK13Q1W4C9 94 aa16.28■□□□□ 0.2
ITM2C-202ENST00000326427 TRPT1Q86TN4 253 aaKnown RBP16.28■□□□□ 0.2
ITM2C-202ENST00000326427 ZNRF2Q8NHG8 242 aa16.28■□□□□ 0.2
ITM2C-202ENST00000326427 PGPEP1Q9NXJ5 209 aa16.28■□□□□ 0.2
ITM2C-202ENST00000326427 A0A096LNT2 108 aa16.27■□□□□ 0.2
ITM2C-202ENST00000326427 J3QLI3 93 aa16.27■□□□□ 0.2
ITM2C-202ENST00000326427 SYNJ2BPP57105 145 aa16.27■□□□□ 0.2
ITM2C-202ENST00000326427 ZNF256Q9Y2P7 627 aaPredicted RBP16.27■□□□□ 0.2
ITM2C-202ENST00000326427 COL12A1Q99715 3063 aa16.27■□□□□ 0.2
ITM2C-202ENST00000326427 GAGE13Q4V321 117 aa16.26■□□□□ 0.19
ITM2C-202ENST00000326427 TSPEAR-AS2P59090 65 aa16.26■□□□□ 0.19
ITM2C-202ENST00000326427 NFE4Q86UQ8 179 aa16.26■□□□□ 0.19
ITM2C-202ENST00000326427 NRGNQ92686 78 aa16.25■□□□□ 0.19
ITM2C-202ENST00000326427 PKD1L2Q7Z442 2459 aa16.25■□□□□ 0.19
ITM2C-202ENST00000326427 DOPEY1Q5JWR5 2465 aa16.25■□□□□ 0.19
ITM2C-202ENST00000326427 ELANEP08246 267 aa16.25■□□□□ 0.19
ITM2C-202ENST00000326427 MRPL16Q9NX20 251 aaKnown RBP16.25■□□□□ 0.19
ITM2C-202ENST00000326427 TMEM170BQ5T4T1 132 aa16.24■□□□□ 0.19
ITM2C-202ENST00000326427 AMELXQ99217 191 aa16.24■□□□□ 0.19
ITM2C-202ENST00000326427 CELSR2Q9HCU4 2923 aa16.24■□□□□ 0.19
ITM2C-202ENST00000326427 CSPG4Q6UVK1 2322 aa16.23■□□□□ 0.19
ITM2C-202ENST00000326427 SPG11Q96JI7 2443 aa16.23■□□□□ 0.19
ITM2C-202ENST00000326427 VPREB3Q9UKI3 123 aa16.23■□□□□ 0.19
ITM2C-202ENST00000326427 TRGV11A0A075B6L2 103 aa16.23■□□□□ 0.19
ITM2C-202ENST00000326427 P0DMU3 169 aa16.23■□□□□ 0.19
ITM2C-202ENST00000326427 FAM231AP0DMU4 169 aa16.23■□□□□ 0.19
ITM2C-202ENST00000326427 FAM231CP0DMU5 169 aa16.23■□□□□ 0.19
ITM2C-202ENST00000326427 HOXD3P31249 432 aaPredicted RBP16.23■□□□□ 0.19
ITM2C-202ENST00000326427 SLC25A29Q8N8R3 303 aa16.23■□□□□ 0.19
ITM2C-202ENST00000326427 UBE2E2Q96LR5 201 aa16.23■□□□□ 0.19
ITM2C-202ENST00000326427 TSPAN13O95857 204 aa16.22■□□□□ 0.19
ITM2C-202ENST00000326427 ETDBQ3ZM63 59 aa16.22■□□□□ 0.19
ITM2C-202ENST00000326427 C20orf203Q8NBC4 194 aa16.22■□□□□ 0.19
ITM2C-202ENST00000326427 I3L3M4 83 aa16.21■□□□□ 0.19
ITM2C-202ENST00000326427 J3QR89 54 aa16.21■□□□□ 0.19
ITM2C-202ENST00000326427 ZNF702PQ9H963 129 aa16.21■□□□□ 0.19
ITM2C-202ENST00000326427 EDA2RQ9HAV5 297 aa16.21■□□□□ 0.19
ITM2C-202ENST00000326427 J3QQQ9 107 aa16.2■□□□□ 0.18
ITM2C-202ENST00000326427 IGHV3-30P01768 117 aa16.2■□□□□ 0.18
ITM2C-202ENST00000326427 IGHV3-30-5P0DP03 117 aa16.2■□□□□ 0.18
ITM2C-202ENST00000326427 SH2D6Q7Z4S9 175 aa16.2■□□□□ 0.18
ITM2C-202ENST00000326427 CFAP46Q8IYW2 2715 aa16.2■□□□□ 0.18
ITM2C-202ENST00000326427 FSHBP01225 129 aa16.2■□□□□ 0.18
ITM2C-202ENST00000326427 UBE2D3P61077 147 aa16.2■□□□□ 0.18
ITM2C-202ENST00000326427 UBE2D2P62837 147 aa16.2■□□□□ 0.18
ITM2C-202ENST00000326427 NDUFA11Q86Y39 141 aa16.2■□□□□ 0.18
ITM2C-202ENST00000326427 TGFAP01135 160 aa16.19■□□□□ 0.18
ITM2C-202ENST00000326427 DLX4Q92988 240 aaPredicted RBP16.19■□□□□ 0.18
ITM2C-202ENST00000326427 DUX5Q96PT3 197 aa16.19■□□□□ 0.18
ITM2C-202ENST00000326427 OPRPNQ99935 248 aaPredicted RBP16.19■□□□□ 0.18
ITM2C-202ENST00000326427 TMEM223A0PJW6 202 aa16.18■□□□□ 0.18
ITM2C-202ENST00000326427 RBMY1A1P0DJD3 496 aaKnown RBP16.18■□□□□ 0.18
ITM2C-202ENST00000326427 RBMY1CP0DJD4 496 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms