RNA–Protein interactions for RNA: ENST00000316308.8

CLK4-201, Transcript of CDC like kinase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLK4, Length 2,568 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-201ENST00000316308 KHDC1LQ5JSQ8 128 aa10.93□□□□□ -0.66
CLK4-201ENST00000316308 SUMO4Q6EEV6 95 aa10.93□□□□□ -0.66
CLK4-201ENST00000316308 AP1S3Q96PC3 154 aa10.93□□□□□ -0.66
CLK4-201ENST00000316308 EMP1P54849 157 aa10.93□□□□□ -0.66
CLK4-201ENST00000316308 UBE2E2Q96LR5 201 aa10.93□□□□□ -0.66
CLK4-201ENST00000316308 IGHV3-16A0A0C4DH30 117 aa10.92□□□□□ -0.66
CLK4-201ENST00000316308 F5H697 171 aa10.92□□□□□ -0.66
CLK4-201ENST00000316308 DPM2O94777 84 aa10.92□□□□□ -0.66
CLK4-201ENST00000316308 DUSP14O95147 198 aaKnown RBP10.92□□□□□ -0.66
CLK4-201ENST00000316308 RPL39P62891 51 aaKnown RBP10.92□□□□□ -0.66
CLK4-201ENST00000316308 C2orf66Q6UXQ4 117 aa10.92□□□□□ -0.66
CLK4-201ENST00000316308 OR11H1Q8NG94 326 aa10.92□□□□□ -0.66
CLK4-201ENST00000316308 RAB37Q96AX2 223 aa10.92□□□□□ -0.66
CLK4-201ENST00000316308 NXPH4O95158 308 aa10.92□□□□□ -0.66
CLK4-201ENST00000316308 ELANEP08246 267 aa10.92□□□□□ -0.66
CLK4-201ENST00000316308 SNRPD3P62318 126 aaKnown RBP10.92□□□□□ -0.66
CLK4-201ENST00000316308 SCGB3A1Q96QR1 104 aa10.92□□□□□ -0.66
CLK4-201ENST00000316308 A0A087WX48 190 aa10.91□□□□□ -0.66
CLK4-201ENST00000316308 AMTNQ6UX39 209 aa10.91□□□□□ -0.66
CLK4-201ENST00000316308 TRBV7-9A0A0J9YWB2 115 aa10.91□□□□□ -0.66
CLK4-201ENST00000316308 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.91□□□□□ -0.66
CLK4-201ENST00000316308 ATP5LO75964 103 aa10.91□□□□□ -0.66
CLK4-201ENST00000316308 TSHBP01222 138 aa10.91□□□□□ -0.66
CLK4-201ENST00000316308 MORN3Q6PF18 240 aaPredicted RBP10.91□□□□□ -0.66
CLK4-201ENST00000316308 TOMM6Q96B49 74 aa10.91□□□□□ -0.66
CLK4-201ENST00000316308 JMJD8Q96S16 334 aa10.91□□□□□ -0.66
CLK4-201ENST00000316308 FASNP49327 2511 aaKnown RBP10.9□□□□□ -0.66
CLK4-201ENST00000316308 RBMY1BA6NDE4 496 aaKnown RBP10.9□□□□□ -0.66
CLK4-201ENST00000316308 RBMY1EA6NEQ0 496 aaKnown RBP10.9□□□□□ -0.66
CLK4-201ENST00000316308 RBMY1DP0C7P1 496 aaKnown RBP10.9□□□□□ -0.66
CLK4-201ENST00000316308 CDKN1BP46527 198 aa10.9□□□□□ -0.66
CLK4-201ENST00000316308 FXYD2P54710 66 aa10.9□□□□□ -0.66
CLK4-201ENST00000316308 UNC79Q9P2D8 2635 aa10.9□□□□□ -0.66
CLK4-201ENST00000316308 NOTCH2Q04721 2471 aa10.9□□□□□ -0.66
CLK4-201ENST00000316308 TRBV25-1A0A075B6N4 114 aa10.9□□□□□ -0.66
CLK4-201ENST00000316308 MED14OSP0DP75 135 aa10.9□□□□□ -0.66
CLK4-201ENST00000316308 DEFB131AP59861 70 aa10.9□□□□□ -0.66
CLK4-201ENST00000316308 BAALCQ8WXS3 180 aa10.9□□□□□ -0.66
CLK4-201ENST00000316308 Q9UF83 564 aa10.9□□□□□ -0.66
CLK4-201ENST00000316308 TMEM61Q8N0U2 210 aa10.89□□□□□ -0.67
CLK4-201ENST00000316308 DLX4Q92988 240 aaPredicted RBP10.89□□□□□ -0.67
CLK4-201ENST00000316308 C20orf78Q9BR46 151 aa10.89□□□□□ -0.67
CLK4-201ENST00000316308 NACAE9PAV3 2078 aa10.89□□□□□ -0.67
CLK4-201ENST00000316308 IGHV3-73A0A0B4J1V6 119 aa10.89□□□□□ -0.67
CLK4-201ENST00000316308 TMEM89A2RUT3 159 aa10.89□□□□□ -0.67
CLK4-201ENST00000316308 K7ERJ3 54 aa10.89□□□□□ -0.67
CLK4-201ENST00000316308 LGALS9O00182 355 aa10.89□□□□□ -0.67
CLK4-201ENST00000316308 PROK1P58294 105 aa10.89□□□□□ -0.67
CLK4-201ENST00000316308 NEXN-AS1Q8NBZ9 246 aa10.89□□□□□ -0.67
CLK4-201ENST00000316308 RNASE8Q8TDE3 154 aaKnown RBP10.89□□□□□ -0.67
CLK4-201ENST00000316308 C9orf85Q96MD7 179 aa10.89□□□□□ -0.67
CLK4-201ENST00000316308 C2CD3Q4AC94 2353 aa10.89□□□□□ -0.67
CLK4-201ENST00000316308 HECTD1Q9ULT8 2610 aa10.89□□□□□ -0.67
CLK4-201ENST00000316308 CRYGDP07320 174 aa10.88□□□□□ -0.67
CLK4-201ENST00000316308 POM121L12Q8N7R1 296 aa10.88□□□□□ -0.67
CLK4-201ENST00000316308 ZNF256Q9Y2P7 627 aaPredicted RBP10.88□□□□□ -0.67
CLK4-201ENST00000316308 RNF152Q8N8N0 203 aa10.88□□□□□ -0.67
CLK4-201ENST00000316308 OPRPNQ99935 248 aaPredicted RBP10.88□□□□□ -0.67
CLK4-201ENST00000316308 IGHV1OR15-1A0A075B7D0 117 aa10.87□□□□□ -0.67
CLK4-201ENST00000316308 P0DMU3 169 aa10.87□□□□□ -0.67
CLK4-201ENST00000316308 FAM231AP0DMU4 169 aa10.87□□□□□ -0.67
CLK4-201ENST00000316308 FAM231CP0DMU5 169 aa10.87□□□□□ -0.67
CLK4-201ENST00000316308 GCSHP23434 173 aa10.87□□□□□ -0.67
CLK4-201ENST00000316308 POLR2KP53803 58 aaKnown RBP10.87□□□□□ -0.67
CLK4-201ENST00000316308 ORMDL2Q53FV1 153 aa10.87□□□□□ -0.67
CLK4-201ENST00000316308 OR9G4Q8NGQ1 327 aa10.87□□□□□ -0.67
CLK4-201ENST00000316308 A0A1W2PRX2 142 aa10.87□□□□□ -0.67
CLK4-201ENST00000316308 SDHAF1A6NFY7 115 aa10.87□□□□□ -0.67
CLK4-201ENST00000316308 PRSS29PA6NIE9 313 aa10.87□□□□□ -0.67
CLK4-201ENST00000316308 CHAC1Q9BUX1 264 aa10.87□□□□□ -0.67
CLK4-201ENST00000316308 TP53TG1Q9Y2A0 90 aa10.87□□□□□ -0.67
CLK4-201ENST00000316308 CHTOPQ9Y3Y2 248 aaKnown RBP10.87□□□□□ -0.67
CLK4-201ENST00000316308 H3BUT2 72 aa10.86□□□□□ -0.67
CLK4-201ENST00000316308 HSD52Q0P140 79 aa10.86□□□□□ -0.67
CLK4-201ENST00000316308 ZNF56Q15929 161 aa10.86□□□□□ -0.67
CLK4-201ENST00000316308 ZFP2Q6ZN57 461 aa10.86□□□□□ -0.67
CLK4-201ENST00000316308 ESM1Q9NQ30 184 aa10.86□□□□□ -0.67
CLK4-201ENST00000316308 F8VRH5 84 aa10.86□□□□□ -0.67
CLK4-201ENST00000316308 ZNF876PQ49A33 203 aa10.86□□□□□ -0.67
CLK4-201ENST00000316308 Q6ZSV7 163 aa10.86□□□□□ -0.67
CLK4-201ENST00000316308 KLHL30-AS1Q8NEE0 82 aa10.86□□□□□ -0.67
CLK4-201ENST00000316308 OR4C5Q8NGB2 326 aa10.86□□□□□ -0.67
CLK4-201ENST00000316308 GCN1Q92616 2671 aaKnown RBP10.85□□□□□ -0.67
CLK4-201ENST00000316308 H7C1H1 209 aa10.85□□□□□ -0.67
CLK4-201ENST00000316308 LINC01619G3V211 115 aa10.84□□□□□ -0.67
CLK4-201ENST00000316308 M0QY20 66 aa10.84□□□□□ -0.67
CLK4-201ENST00000316308 SEC11AP67812 179 aa10.84□□□□□ -0.67
CLK4-201ENST00000316308 FOXI2Q6ZQN5 318 aa10.84□□□□□ -0.67
CLK4-201ENST00000316308 Q8N2B8 174 aa10.84□□□□□ -0.67
CLK4-201ENST00000316308 SIVA1O15304 175 aa10.84□□□□□ -0.67
CLK4-201ENST00000316308 HLA-DRB4P13762 266 aa10.83□□□□□ -0.68
CLK4-201ENST00000316308 HLA-DRB4X5D2U9 266 aa10.83□□□□□ -0.68
CLK4-201ENST00000316308 IGIPA6NJ69 53 aa10.83□□□□□ -0.68
CLK4-201ENST00000316308 H3BMM0 161 aa10.83□□□□□ -0.68
CLK4-201ENST00000316308 ODF3Q96PU9 254 aa10.83□□□□□ -0.68
CLK4-201ENST00000316308 TRAV12-1A0A0B4J245 112 aa10.82□□□□□ -0.68
CLK4-201ENST00000316308 DNAJC9-AS1A6NH13 148 aa10.82□□□□□ -0.68
CLK4-201ENST00000316308 CD300EQ496F6 205 aaPredicted RBP10.82□□□□□ -0.68
CLK4-201ENST00000316308 LRRC75A-AS1Q8N1F1 130 aa10.82□□□□□ -0.68
CLK4-201ENST00000316308 IGLV4-69A0A075B6H9 119 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 98.3 ms