RNA–Protein interactions for RNA: ENST00000315869.7

TFE3-201, Transcript of transcription factor binding to IGHM enhancer 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TFE3, Length 3,415 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFE3-201ENST00000315869 RHPN1-AS1Q9BWJ2 59 aa11.29□□□□□ -0.6
TFE3-201ENST00000315869 CD7P09564 240 aa11.29□□□□□ -0.6
TFE3-201ENST00000315869 NBPF19A0A087WUL8 3843 aa11.28□□□□□ -0.6
TFE3-201ENST00000315869 TRAV12-3A0A0B4J271 114 aa11.28□□□□□ -0.6
TFE3-201ENST00000315869 H3BUX3 64 aa11.28□□□□□ -0.6
TFE3-201ENST00000315869 ZFAND2AQ8N6M9 145 aa11.28□□□□□ -0.6
TFE3-201ENST00000315869 LINC01549A6NIU2 74 aa11.28□□□□□ -0.6
TFE3-201ENST00000315869 AZU1P20160 251 aa11.28□□□□□ -0.6
TFE3-201ENST00000315869 PSMB2P49721 201 aa11.28□□□□□ -0.6
TFE3-201ENST00000315869 E9PLD3 99 aa11.28□□□□□ -0.6
TFE3-201ENST00000315869 BLCAPP62952 87 aa11.28□□□□□ -0.6
TFE3-201ENST00000315869 H7C2G1 150 aa11.27□□□□□ -0.6
TFE3-201ENST00000315869 OVOL1O14753 267 aa11.27□□□□□ -0.6
TFE3-201ENST00000315869 PIFOQ8TCI5 191 aa11.27□□□□□ -0.6
TFE3-201ENST00000315869 PHLDA1Q8WV24 401 aaPredicted RBP11.27□□□□□ -0.6
TFE3-201ENST00000315869 BAALCQ8WXS3 180 aa11.27□□□□□ -0.6
TFE3-201ENST00000315869 TP53TG1Q9Y2A0 90 aa11.27□□□□□ -0.6
TFE3-201ENST00000315869 SCGB1C2P0DMR2 95 aa11.27□□□□□ -0.61
TFE3-201ENST00000315869 RPL39P62891 51 aaKnown RBP11.27□□□□□ -0.61
TFE3-201ENST00000315869 RRN3P1Q2M238 152 aa11.27□□□□□ -0.61
TFE3-201ENST00000315869 SIGMAR1Q99720 223 aa11.27□□□□□ -0.61
TFE3-201ENST00000315869 IGHV3-64A0A075B6Q5 118 aa11.26□□□□□ -0.61
TFE3-201ENST00000315869 MRPL53Q96EL3 112 aaKnown RBP11.26□□□□□ -0.61
TFE3-201ENST00000315869 LGALS1P09382 135 aaKnown RBP11.26□□□□□ -0.61
TFE3-201ENST00000315869 PLEKHB2Q96CS7 222 aa11.26□□□□□ -0.61
TFE3-201ENST00000315869 ZNF688P0C7X2 276 aa11.25□□□□□ -0.61
TFE3-201ENST00000315869 KRTAP10-9P60411 292 aa11.25□□□□□ -0.61
TFE3-201ENST00000315869 AJUBAQ96IF1 538 aa11.25□□□□□ -0.61
TFE3-201ENST00000315869 KIR2DL4Q99706 377 aa11.25□□□□□ -0.61
TFE3-201ENST00000315869 INSL3P51460 131 aa11.25□□□□□ -0.61
TFE3-201ENST00000315869 ZNF56Q15929 161 aa11.25□□□□□ -0.61
TFE3-201ENST00000315869 HIST2H2BDQ6DRA6 164 aa11.25□□□□□ -0.61
TFE3-201ENST00000315869 TOMM6Q96B49 74 aa11.25□□□□□ -0.61
TFE3-201ENST00000315869 PSMG3-AS1Q96PY0 264 aa11.25□□□□□ -0.61
TFE3-201ENST00000315869 TENM4Q6N022 2769 aa11.25□□□□□ -0.61
TFE3-201ENST00000315869 UBR5O95071 2799 aaPredicted RBP11.25□□□□□ -0.61
TFE3-201ENST00000315869 TRAV12-2A0A075B6T6 113 aa11.25□□□□□ -0.61
TFE3-201ENST00000315869 FAM223BA6NKX1 122 aa11.25□□□□□ -0.61
TFE3-201ENST00000315869 IGHV4-38-2P0DP08 117 aa11.25□□□□□ -0.61
TFE3-201ENST00000315869 EDN2P20800 178 aa11.25□□□□□ -0.61
TFE3-201ENST00000315869 HERVK_113P61574 105 aa11.25□□□□□ -0.61
TFE3-201ENST00000315869 TMEM95Q3KNT9 176 aa11.25□□□□□ -0.61
TFE3-201ENST00000315869 FAM223AQ8IWN6 122 aa11.25□□□□□ -0.61
TFE3-201ENST00000315869 ZNF843Q8N446 348 aa11.25□□□□□ -0.61
TFE3-201ENST00000315869 GAGE12HA6NDE8 117 aa11.24□□□□□ -0.61
TFE3-201ENST00000315869 F8W1H4 67 aa11.24□□□□□ -0.61
TFE3-201ENST00000315869 MXRA5Q9NR99 2828 aa11.24□□□□□ -0.61
TFE3-201ENST00000315869 TMEM238LA0A1B0GVL6 79 aa11.24□□□□□ -0.61
TFE3-201ENST00000315869 A6NJY4 79 aa11.24□□□□□ -0.61
TFE3-201ENST00000315869 Q6ZS46 218 aa11.24□□□□□ -0.61
TFE3-201ENST00000315869 APCP25054 2843 aa11.24□□□□□ -0.61
TFE3-201ENST00000315869 LINC01546A6NGU7 62 aa11.23□□□□□ -0.61
TFE3-201ENST00000315869 TAL2Q16559 108 aa11.23□□□□□ -0.61
TFE3-201ENST00000315869 CLEC2AQ6UVW9 174 aa11.23□□□□□ -0.61
TFE3-201ENST00000315869 NEXN-AS1Q8NBZ9 246 aa11.23□□□□□ -0.61
TFE3-201ENST00000315869 C20orf78Q9BR46 151 aa11.23□□□□□ -0.61
TFE3-201ENST00000315869 U3KQE9 123 aa11.23□□□□□ -0.61
TFE3-201ENST00000315869 SPAG8Q99932 426 aaPredicted RBP11.23□□□□□ -0.61
TFE3-201ENST00000315869 SPANXB1Q9NS25 103 aaPredicted RBP11.23□□□□□ -0.61
TFE3-201ENST00000315869 IGHV1-69DA0A0B4J2H0 117 aa11.23□□□□□ -0.61
TFE3-201ENST00000315869 C11orf86A6NJI1 115 aa11.23□□□□□ -0.61
TFE3-201ENST00000315869 NDUFA4O00483 81 aa11.23□□□□□ -0.61
TFE3-201ENST00000315869 IGHV1-69P01742 117 aa11.23□□□□□ -0.61
TFE3-201ENST00000315869 GPHB5Q86YW7 130 aa11.22□□□□□ -0.61
TFE3-201ENST00000315869 TRAV12-1A0A0B4J245 112 aa11.22□□□□□ -0.61
TFE3-201ENST00000315869 TRBV7-3A0A075B6L6 115 aa11.22□□□□□ -0.61
TFE3-201ENST00000315869 PIMREGQ9BSJ6 248 aa11.22□□□□□ -0.61
TFE3-201ENST00000315869 IGHV4-4A0A075B6R2 117 aa11.21□□□□□ -0.61
TFE3-201ENST00000315869 SDHAF1A6NFY7 115 aa11.21□□□□□ -0.61
TFE3-201ENST00000315869 RNASE3P12724 160 aaKnown RBP11.21□□□□□ -0.61
TFE3-201ENST00000315869 LENEPQ9Y5L5 61 aa11.21□□□□□ -0.61
TFE3-201ENST00000315869 MUC4Q99102 2169 aa11.21□□□□□ -0.61
TFE3-201ENST00000315869 PTH2Q96A98 100 aa11.21□□□□□ -0.62
TFE3-201ENST00000315869 OPRPNQ99935 248 aaPredicted RBP11.21□□□□□ -0.62
TFE3-201ENST00000315869 KLK9Q9UKQ9 250 aa11.21□□□□□ -0.62
TFE3-201ENST00000315869 NDUFS8O00217 210 aa11.21□□□□□ -0.62
TFE3-201ENST00000315869 ZFP2Q6ZN57 461 aa11.21□□□□□ -0.62
TFE3-201ENST00000315869 AVPP01185 164 aa11.2□□□□□ -0.62
TFE3-201ENST00000315869 ID1P41134 155 aa11.2□□□□□ -0.62
TFE3-201ENST00000315869 DAZ1Q9NQZ3 744 aaKnown RBP11.2□□□□□ -0.62
TFE3-201ENST00000315869 SUMO4Q6EEV6 95 aa11.19□□□□□ -0.62
TFE3-201ENST00000315869 PPP1R17O96001 155 aa11.19□□□□□ -0.62
TFE3-201ENST00000315869 Q1RN00 199 aa11.19□□□□□ -0.62
TFE3-201ENST00000315869 C10orf105Q8TEF2 133 aa11.19□□□□□ -0.62
TFE3-201ENST00000315869 IGHV3-73A0A0B4J1V6 119 aa11.19□□□□□ -0.62
TFE3-201ENST00000315869 LGALS3P17931 250 aaKnown RBP11.19□□□□□ -0.62
TFE3-201ENST00000315869 DLX4Q92988 240 aaPredicted RBP11.19□□□□□ -0.62
TFE3-201ENST00000315869 RAX2Q96IS3 184 aa11.18□□□□□ -0.62
TFE3-201ENST00000315869 ZNF469Q96JG9 3925 aaPredicted RBP11.18□□□□□ -0.62
TFE3-201ENST00000315869 VCYO14598 125 aa11.18□□□□□ -0.62
TFE3-201ENST00000315869 PMVKQ15126 192 aa11.18□□□□□ -0.62
TFE3-201ENST00000315869 SPINK13Q1W4C9 94 aa11.18□□□□□ -0.62
TFE3-201ENST00000315869 BEX4Q9NWD9 120 aaPredicted RBP11.18□□□□□ -0.62
TFE3-201ENST00000315869 COX6B1P14854 86 aa11.17□□□□□ -0.62
TFE3-201ENST00000315869 MORN3Q6PF18 240 aaPredicted RBP11.17□□□□□ -0.62
TFE3-201ENST00000315869 USMG5Q96IX5 58 aa11.17□□□□□ -0.62
TFE3-201ENST00000315869 TRAV2A0A0B4J234 112 aa11.17□□□□□ -0.62
TFE3-201ENST00000315869 PRSS47A8MTI9 375 aa11.17□□□□□ -0.62
TFE3-201ENST00000315869 KHDC1LQ5JSQ8 128 aa11.16□□□□□ -0.62
TFE3-201ENST00000315869 SYT8Q8NBV8 401 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms