RNA–Protein interactions for RNA: ENST00000311626.8

HOXB3-201, Transcript of homeobox B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXB3, Length 2,642 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-201ENST00000311626 LGALS1P09382 135 aaKnown RBP18.88■□□□□ 0.61
HOXB3-201ENST00000311626 AMTNQ6UX39 209 aa18.88■□□□□ 0.61
HOXB3-201ENST00000311626 PLEKHB2Q96CS7 222 aa18.88■□□□□ 0.61
HOXB3-201ENST00000311626 FAM208BQ5VWN6 2430 aa18.88■□□□□ 0.61
HOXB3-201ENST00000311626 SYNJ2BPP57105 145 aa18.88■□□□□ 0.61
HOXB3-201ENST00000311626 RPL24P83731 157 aaKnown RBP18.88■□□□□ 0.61
HOXB3-201ENST00000311626 SPINK13Q1W4C9 94 aa18.87■□□□□ 0.61
HOXB3-201ENST00000311626 ZNF256Q9Y2P7 627 aaPredicted RBP18.87■□□□□ 0.61
HOXB3-201ENST00000311626 FBN2P35556 2912 aa18.87■□□□□ 0.61
HOXB3-201ENST00000311626 TRBV7-3A0A075B6L6 115 aa18.87■□□□□ 0.61
HOXB3-201ENST00000311626 ZFP2Q6ZN57 461 aa18.87■□□□□ 0.61
HOXB3-201ENST00000311626 ACACBO00763 2458 aa18.86■□□□□ 0.61
HOXB3-201ENST00000311626 ZFYVE26Q68DK2 2539 aa18.86■□□□□ 0.61
HOXB3-201ENST00000311626 MXRA5Q9NR99 2828 aa18.86■□□□□ 0.61
HOXB3-201ENST00000311626 NXPH4O95158 308 aa18.86■□□□□ 0.61
HOXB3-201ENST00000311626 C11orf86A6NJI1 115 aa18.86■□□□□ 0.61
HOXB3-201ENST00000311626 K7EMT4 169 aa18.86■□□□□ 0.61
HOXB3-201ENST00000311626 SCGB2A2Q13296 93 aa18.86■□□□□ 0.61
HOXB3-201ENST00000311626 ZNF479Q96JC4 524 aa18.86■□□□□ 0.61
HOXB3-201ENST00000311626 ANKRD17O75179 2603 aaKnown RBP18.85■□□□□ 0.61
HOXB3-201ENST00000311626 ZNF815PA8K554 130 aa18.85■□□□□ 0.61
HOXB3-201ENST00000311626 SDHAF1A6NFY7 115 aa18.84■□□□□ 0.61
HOXB3-201ENST00000311626 E9PLD3 99 aa18.84■□□□□ 0.61
HOXB3-201ENST00000311626 G3V4G9 280 aa18.84■□□□□ 0.61
HOXB3-201ENST00000311626 Q8N1Y9 231 aa18.84■□□□□ 0.61
HOXB3-201ENST00000311626 OPRPNQ99935 248 aaPredicted RBP18.84■□□□□ 0.61
HOXB3-201ENST00000311626 POLR2KP53803 58 aaKnown RBP18.84■□□□□ 0.61
HOXB3-201ENST00000311626 H3BMG7 143 aa18.83■□□□□ 0.61
HOXB3-201ENST00000311626 HIST2H2BDQ6DRA6 164 aa18.83■□□□□ 0.61
HOXB3-201ENST00000311626 SFTA2Q6UW10 78 aa18.83■□□□□ 0.61
HOXB3-201ENST00000311626 TRBV7-9A0A0J9YWB2 115 aa18.83■□□□□ 0.6
HOXB3-201ENST00000311626 TGFAP01135 160 aa18.83■□□□□ 0.6
HOXB3-201ENST00000311626 HTN1P15515 57 aa18.83■□□□□ 0.6
HOXB3-201ENST00000311626 POM121L12Q8N7R1 296 aa18.83■□□□□ 0.6
HOXB3-201ENST00000311626 IGHV3-16A0A0C4DH30 117 aa18.82■□□□□ 0.6
HOXB3-201ENST00000311626 ZNF56Q15929 161 aa18.82■□□□□ 0.6
HOXB3-201ENST00000311626 SCGB1D4Q6XE38 83 aa18.82■□□□□ 0.6
HOXB3-201ENST00000311626 IGLV4-69A0A075B6H9 119 aa18.82■□□□□ 0.6
HOXB3-201ENST00000311626 WFDC2Q14508 124 aa18.82■□□□□ 0.6
HOXB3-201ENST00000311626 A0A0J9YX75 114 aa18.81■□□□□ 0.6
HOXB3-201ENST00000311626 TEX48A0A1B0GUV7 120 aa18.81■□□□□ 0.6
HOXB3-201ENST00000311626 IGHV4OR15-8A0A075B7B6 117 aa18.81■□□□□ 0.6
HOXB3-201ENST00000311626 A0A087WW49 117 aa18.81■□□□□ 0.6
HOXB3-201ENST00000311626 IGIPA6NJ69 53 aa18.81■□□□□ 0.6
HOXB3-201ENST00000311626 PRM2P04554 102 aa18.81■□□□□ 0.6
HOXB3-201ENST00000311626 TAL2Q16559 108 aa18.81■□□□□ 0.6
HOXB3-201ENST00000311626 PPP1R17O96001 155 aa18.8■□□□□ 0.6
HOXB3-201ENST00000311626 MORN3Q6PF18 240 aaPredicted RBP18.8■□□□□ 0.6
HOXB3-201ENST00000311626 KIR2DL4Q99706 377 aa18.79■□□□□ 0.6
HOXB3-201ENST00000311626 VCYO14598 125 aa18.79■□□□□ 0.6
HOXB3-201ENST00000311626 FOXI2Q6ZQN5 318 aa18.79■□□□□ 0.6
HOXB3-201ENST00000311626 CUBNO60494 3623 aa18.78■□□□□ 0.6
HOXB3-201ENST00000311626 SNRPD3P62318 126 aaKnown RBP18.78■□□□□ 0.6
HOXB3-201ENST00000311626 C18orf65Q6ZTR6 163 aa18.78■□□□□ 0.6
HOXB3-201ENST00000311626 K7EQG2 157 aa18.77■□□□□ 0.6
HOXB3-201ENST00000311626 DEFB136Q30KP8 78 aa18.77■□□□□ 0.6
HOXB3-201ENST00000311626 TMEM170BQ5T4T1 132 aa18.77■□□□□ 0.6
HOXB3-201ENST00000311626 IGHV3-73A0A0B4J1V6 119 aa18.77■□□□□ 0.6
HOXB3-201ENST00000311626 SRSF9Q13242 221 aaKnown RBP eCLIP18.77■□□□□ 0.6
HOXB3-201ENST00000311626 C9orf85Q96MD7 179 aa18.77■□□□□ 0.6
HOXB3-201ENST00000311626 PRB1P04280 392 aa18.76■□□□□ 0.59
HOXB3-201ENST00000311626 COX6B1P14854 86 aa18.76■□□□□ 0.59
HOXB3-201ENST00000311626 TSPEAR-AS2P59090 65 aa18.76■□□□□ 0.59
HOXB3-201ENST00000311626 BEX4Q9NWD9 120 aaPredicted RBP18.76■□□□□ 0.59
HOXB3-201ENST00000311626 PMVKQ15126 192 aa18.76■□□□□ 0.59
HOXB3-201ENST00000311626 RRN3P1Q2M238 152 aa18.76■□□□□ 0.59
HOXB3-201ENST00000311626 SH2D6Q7Z4S9 175 aa18.76■□□□□ 0.59
HOXB3-201ENST00000311626 ZNRF2Q8NHG8 242 aa18.76■□□□□ 0.59
HOXB3-201ENST00000311626 LINC01356Q8N9X3 169 aa18.75■□□□□ 0.59
HOXB3-201ENST00000311626 KNCNA6PVL3 124 aa18.75■□□□□ 0.59
HOXB3-201ENST00000311626 COTL1Q14019 142 aa18.75■□□□□ 0.59
HOXB3-201ENST00000311626 LRRK2Q5S007 2527 aa18.75■□□□□ 0.59
HOXB3-201ENST00000311626 IGHV1OR15-1A0A075B7D0 117 aa18.74■□□□□ 0.59
HOXB3-201ENST00000311626 HOXA3O43365 443 aaPredicted RBP18.74■□□□□ 0.59
HOXB3-201ENST00000311626 HOXD3P31249 432 aaPredicted RBP18.74■□□□□ 0.59
HOXB3-201ENST00000311626 ABCA12Q86UK0 2595 aa18.74■□□□□ 0.59
HOXB3-201ENST00000311626 M0QY20 66 aa18.73■□□□□ 0.59
HOXB3-201ENST00000311626 LGALS9O00182 355 aa18.73■□□□□ 0.59
HOXB3-201ENST00000311626 DUX3Q96PT4 197 aa18.73■□□□□ 0.59
HOXB3-201ENST00000311626 PGPEP1Q9NXJ5 209 aa18.73■□□□□ 0.59
HOXB3-201ENST00000311626 ZNF876PQ49A33 203 aa18.73■□□□□ 0.59
HOXB3-201ENST00000311626 PTPN13Q12923 2485 aa18.73■□□□□ 0.59
HOXB3-201ENST00000311626 TEX15Q9BXT5 2789 aa18.72■□□□□ 0.59
HOXB3-201ENST00000311626 APOMO95445 188 aa18.72■□□□□ 0.59
HOXB3-201ENST00000311626 RBMY1A1P0DJD3 496 aaKnown RBP18.72■□□□□ 0.59
HOXB3-201ENST00000311626 RBMY1CP0DJD4 496 aa18.72■□□□□ 0.59
HOXB3-201ENST00000311626 RBMY1FQ15415 496 aaKnown RBP18.72■□□□□ 0.59
HOXB3-201ENST00000311626 IGHV3-64A0A075B6Q5 118 aa18.71■□□□□ 0.59
HOXB3-201ENST00000311626 P0DMU3 169 aa18.71■□□□□ 0.59
HOXB3-201ENST00000311626 FAM231AP0DMU4 169 aa18.71■□□□□ 0.59
HOXB3-201ENST00000311626 FAM231CP0DMU5 169 aa18.71■□□□□ 0.59
HOXB3-201ENST00000311626 PROK1P58294 105 aa18.71■□□□□ 0.59
HOXB3-201ENST00000311626 LINC01549A6NIU2 74 aa18.71■□□□□ 0.59
HOXB3-201ENST00000311626 ZNF580Q9UK33 172 aa18.71■□□□□ 0.59
HOXB3-201ENST00000311626 ZNF462Q96JM2 2506 aa18.71■□□□□ 0.59
HOXB3-201ENST00000311626 TRBV27A0A0K0K1C4 114 aa18.7■□□□□ 0.58
HOXB3-201ENST00000311626 SLURP1P55000 103 aa18.7■□□□□ 0.58
HOXB3-201ENST00000311626 ETDBQ3ZM63 59 aa18.7■□□□□ 0.58
HOXB3-201ENST00000311626 MRPL16Q9NX20 251 aaKnown RBP18.7■□□□□ 0.58
HOXB3-201ENST00000311626 SYT8Q8NBV8 401 aa18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 86.8 ms