RNA–Protein interactions for RNA: ENST00000309660.9

PTPN2-201, Transcript of protein tyrosine phosphatase, non-receptor type 2, humanhuman

TSL 1 (best) BASIC

Gene PTPN2, Length 3,467 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN2-201ENST00000309660 CHAC1Q9BUX1 264 aa8.61□□□□□ -1.03
PTPN2-201ENST00000309660 K7EQG2 157 aa8.6□□□□□ -1.03
PTPN2-201ENST00000309660 DUSP14O95147 198 aaKnown RBP8.6□□□□□ -1.03
PTPN2-201ENST00000309660 DEFB131AP59861 70 aa8.6□□□□□ -1.03
PTPN2-201ENST00000309660 RNF151Q2KHN1 245 aa8.6□□□□□ -1.03
PTPN2-201ENST00000309660 TRBV25-1A0A075B6N4 114 aa8.6□□□□□ -1.03
PTPN2-201ENST00000309660 K7ERJ3 54 aa8.6□□□□□ -1.03
PTPN2-201ENST00000309660 SCGB2A2Q13296 93 aa8.6□□□□□ -1.03
PTPN2-201ENST00000309660 ADAMTSL5Q6ZMM2 481 aa8.6□□□□□ -1.03
PTPN2-201ENST00000309660 OR11H1Q8NG94 326 aa8.6□□□□□ -1.03
PTPN2-201ENST00000309660 C20orf78Q9BR46 151 aa8.6□□□□□ -1.03
PTPN2-201ENST00000309660 C2CD3Q4AC94 2353 aa8.6□□□□□ -1.03
PTPN2-201ENST00000309660 A0A1W2PRX2 142 aa8.6□□□□□ -1.03
PTPN2-201ENST00000309660 ELANEP08246 267 aa8.6□□□□□ -1.03
PTPN2-201ENST00000309660 RPL39P62891 51 aaKnown RBP8.6□□□□□ -1.03
PTPN2-201ENST00000309660 MAPKAPK5-AS1Q8N8E1 139 aa8.6□□□□□ -1.03
PTPN2-201ENST00000309660 TP53TG1Q9Y2A0 90 aa8.6□□□□□ -1.03
PTPN2-201ENST00000309660 JMJD1CQ15652 2540 aa8.59□□□□□ -1.03
PTPN2-201ENST00000309660 GAGE10A6NGK3 116 aa8.59□□□□□ -1.03
PTPN2-201ENST00000309660 F8VRH5 84 aa8.59□□□□□ -1.03
PTPN2-201ENST00000309660 FXYD2P54710 66 aa8.59□□□□□ -1.03
PTPN2-201ENST00000309660 RNASE8Q8TDE3 154 aaKnown RBP8.59□□□□□ -1.03
PTPN2-201ENST00000309660 ZMAT4Q9H898 229 aa8.59□□□□□ -1.03
PTPN2-201ENST00000309660 NACAE9PAV3 2078 aa8.59□□□□□ -1.03
PTPN2-201ENST00000309660 SDHAF1A6NFY7 115 aa8.59□□□□□ -1.03
PTPN2-201ENST00000309660 H7C1H1 209 aa8.59□□□□□ -1.03
PTPN2-201ENST00000309660 ZNF876PQ49A33 203 aa8.59□□□□□ -1.03
PTPN2-201ENST00000309660 UBE2E2Q96LR5 201 aa8.59□□□□□ -1.03
PTPN2-201ENST00000309660 KIR2DL4Q99706 377 aa8.59□□□□□ -1.03
PTPN2-201ENST00000309660 SAMD13Q5VXD3 122 aa8.59□□□□□ -1.04
PTPN2-201ENST00000309660 APRG1Q8IVJ8 170 aa8.59□□□□□ -1.04
PTPN2-201ENST00000309660 NHP2Q9NX24 153 aaKnown RBP8.59□□□□□ -1.04
PTPN2-201ENST00000309660 IGHV1OR15-1A0A075B7D0 117 aa8.58□□□□□ -1.04
PTPN2-201ENST00000309660 FOSL1P15407 271 aa8.58□□□□□ -1.04
PTPN2-201ENST00000309660 TOMM6Q96B49 74 aa8.58□□□□□ -1.04
PTPN2-201ENST00000309660 TRBV7-9A0A0J9YWB2 115 aa8.58□□□□□ -1.04
PTPN2-201ENST00000309660 PRSS29PA6NIE9 313 aa8.58□□□□□ -1.04
PTPN2-201ENST00000309660 OR11H12B2RN74 326 aa8.58□□□□□ -1.04
PTPN2-201ENST00000309660 PLNP26678 52 aa8.58□□□□□ -1.04
PTPN2-201ENST00000309660 CD300EQ496F6 205 aaPredicted RBP8.58□□□□□ -1.04
PTPN2-201ENST00000309660 OR11H2Q8NH07 326 aa8.58□□□□□ -1.04
PTPN2-201ENST00000309660 BAALCQ8WXS3 180 aa8.58□□□□□ -1.04
PTPN2-201ENST00000309660 JMJD8Q96S16 334 aa8.58□□□□□ -1.04
PTPN2-201ENST00000309660 CYSLTR1Q9Y271 337 aa8.58□□□□□ -1.04
PTPN2-201ENST00000309660 PRSS47A8MTI9 375 aa8.57□□□□□ -1.04
PTPN2-201ENST00000309660 MED14OSP0DP75 135 aa8.57□□□□□ -1.04
PTPN2-201ENST00000309660 KLHL30-AS1Q8NEE0 82 aa8.57□□□□□ -1.04
PTPN2-201ENST00000309660 DYNLRB2Q8TF09 96 aa8.57□□□□□ -1.04
PTPN2-201ENST00000309660 IGHV3-16A0A0C4DH30 117 aa8.57□□□□□ -1.04
PTPN2-201ENST00000309660 SYT8Q8NBV8 401 aa8.57□□□□□ -1.04
PTPN2-201ENST00000309660 LINC00315P59091 139 aa8.57□□□□□ -1.04
PTPN2-201ENST00000309660 HIST1H4GQ99525 98 aa8.57□□□□□ -1.04
PTPN2-201ENST00000309660 ZNF580Q9UK33 172 aa8.57□□□□□ -1.04
PTPN2-201ENST00000309660 KIF25-AS1Q9Y6Z4 181 aa8.57□□□□□ -1.04
PTPN2-201ENST00000309660 CR1P17927 2039 aa8.57□□□□□ -1.04
PTPN2-201ENST00000309660 SIVA1O15304 175 aa8.56□□□□□ -1.04
PTPN2-201ENST00000309660 PPP1R17O96001 155 aa8.56□□□□□ -1.04
PTPN2-201ENST00000309660 HLA-DRB4P13762 266 aa8.56□□□□□ -1.04
PTPN2-201ENST00000309660 TMEM61Q8N0U2 210 aa8.56□□□□□ -1.04
PTPN2-201ENST00000309660 WFDC11Q8NEX6 87 aa8.56□□□□□ -1.04
PTPN2-201ENST00000309660 HLA-DRB4X5D2U9 266 aa8.56□□□□□ -1.04
PTPN2-201ENST00000309660 ZFP2Q6ZN57 461 aa8.56□□□□□ -1.04
PTPN2-201ENST00000309660 TMEM89A2RUT3 159 aa8.55□□□□□ -1.04
PTPN2-201ENST00000309660 C9orf118A6NHY6 69 aa8.55□□□□□ -1.04
PTPN2-201ENST00000309660 H3BRM9 83 aa8.55□□□□□ -1.04
PTPN2-201ENST00000309660 VCYO14598 125 aa8.55□□□□□ -1.04
PTPN2-201ENST00000309660 SCGB1D4Q6XE38 83 aa8.55□□□□□ -1.04
PTPN2-201ENST00000309660 NEXN-AS1Q8NBZ9 246 aa8.55□□□□□ -1.04
PTPN2-201ENST00000309660 IGHV3OR16-12A0A075B7B8 117 aa8.55□□□□□ -1.04
PTPN2-201ENST00000309660 GAGE12BA1L429 117 aa8.55□□□□□ -1.04
PTPN2-201ENST00000309660 SMIM13P0DJ93 91 aa8.55□□□□□ -1.04
PTPN2-201ENST00000309660 OPRPNQ99935 248 aaPredicted RBP8.55□□□□□ -1.04
PTPN2-201ENST00000309660 ZNF469Q96JG9 3925 aaPredicted RBP8.55□□□□□ -1.04
PTPN2-201ENST00000309660 LINC01619G3V211 115 aa8.55□□□□□ -1.04
PTPN2-201ENST00000309660 TMEM170BQ5T4T1 132 aa8.55□□□□□ -1.04
PTPN2-201ENST00000309660 FOXI2Q6ZQN5 318 aa8.55□□□□□ -1.04
PTPN2-201ENST00000309660 DLX4Q92988 240 aaPredicted RBP8.55□□□□□ -1.04
PTPN2-201ENST00000309660 PRADC1Q9BSG0 188 aa8.54□□□□□ -1.04
PTPN2-201ENST00000309660 LGALS9O00182 355 aa8.54□□□□□ -1.04
PTPN2-201ENST00000309660 P0DMU3 169 aa8.54□□□□□ -1.04
PTPN2-201ENST00000309660 FAM231AP0DMU4 169 aa8.54□□□□□ -1.04
PTPN2-201ENST00000309660 FAM231CP0DMU5 169 aa8.54□□□□□ -1.04
PTPN2-201ENST00000309660 NXPH4O95158 308 aa8.53□□□□□ -1.04
PTPN2-201ENST00000309660 FSHBP01225 129 aa8.53□□□□□ -1.04
PTPN2-201ENST00000309660 RBMY1A1P0DJD3 496 aaKnown RBP8.53□□□□□ -1.04
PTPN2-201ENST00000309660 RBMY1CP0DJD4 496 aa8.53□□□□□ -1.04
PTPN2-201ENST00000309660 RBMY1FQ15415 496 aaKnown RBP8.53□□□□□ -1.04
PTPN2-201ENST00000309660 SPCS1Q9Y6A9 102 aa8.53□□□□□ -1.04
PTPN2-201ENST00000309660 TRAV12-1A0A0B4J245 112 aa8.53□□□□□ -1.04
PTPN2-201ENST00000309660 PROK1P58294 105 aa8.53□□□□□ -1.04
PTPN2-201ENST00000309660 GTF2H5Q6ZYL4 71 aa8.53□□□□□ -1.04
PTPN2-201ENST00000309660 ZNF815PA8K554 130 aa8.53□□□□□ -1.04
PTPN2-201ENST00000309660 CRYGDP07320 174 aa8.53□□□□□ -1.04
PTPN2-201ENST00000309660 POLR2KP53803 58 aaKnown RBP8.53□□□□□ -1.04
PTPN2-201ENST00000309660 C9orf85Q96MD7 179 aa8.53□□□□□ -1.04
PTPN2-201ENST00000309660 C11orf86A6NJI1 115 aa8.52□□□□□ -1.05
PTPN2-201ENST00000309660 C21orf62-AS1Q17RA5 79 aa8.52□□□□□ -1.05
PTPN2-201ENST00000309660 CEND1Q8N111 149 aa8.52□□□□□ -1.05
PTPN2-201ENST00000309660 CST9LQ9H4G1 147 aa8.52□□□□□ -1.05
PTPN2-201ENST00000309660 IGHV3-64A0A075B6Q5 118 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms