RNA–Protein interactions for RNA: ENST00000299185.12

DEPDC4-201, Transcript of DEP domain containing 4, humanhuman

TSL 1 (best)

Gene DEPDC4, Length 768 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-201ENST00000299185 LOC100131303A0A0U1RQF7 123 aa4.58□□□□□ -1.68
DEPDC4-201ENST00000299185 CXorf65A6NEN9 183 aa4.58□□□□□ -1.68
DEPDC4-201ENST00000299185 HIGD1CA8MV81 97 aa4.58□□□□□ -1.68
DEPDC4-201ENST00000299185 SNAI2O43623 268 aa4.58□□□□□ -1.68
DEPDC4-201ENST00000299185 FAM3BP58499 235 aaPredicted RBP4.58□□□□□ -1.68
DEPDC4-201ENST00000299185 DAD1P61803 113 aa4.58□□□□□ -1.68
DEPDC4-201ENST00000299185 RHEBQ15382 184 aa4.58□□□□□ -1.68
DEPDC4-201ENST00000299185 FAM74A4Q5TZK3 123 aa4.58□□□□□ -1.68
DEPDC4-201ENST00000299185 LINC00612Q8N6U2 182 aa4.58□□□□□ -1.68
DEPDC4-201ENST00000299185 C15orf54Q8N8G6 183 aa4.58□□□□□ -1.68
DEPDC4-201ENST00000299185 ZNF479Q96JC4 524 aa4.58□□□□□ -1.68
DEPDC4-201ENST00000299185 KCNS1Q96KK3 526 aa4.58□□□□□ -1.68
DEPDC4-201ENST00000299185 CTDSP1Q9GZU7 261 aa4.58□□□□□ -1.68
DEPDC4-201ENST00000299185 SCRT2Q9NQ03 307 aa4.58□□□□□ -1.68
DEPDC4-201ENST00000299185 RPS10P5Q9NQ39 176 aa4.58□□□□□ -1.68
DEPDC4-201ENST00000299185 BIN3Q9NQY0 253 aa4.58□□□□□ -1.68
DEPDC4-201ENST00000299185 URGCP-MRPS24S4R325 110 aa4.58□□□□□ -1.68
DEPDC4-201ENST00000299185 TRGV2A0A075B6R0 118 aa4.57□□□□□ -1.68
DEPDC4-201ENST00000299185 A0A0J9YY99 117 aa4.57□□□□□ -1.68
DEPDC4-201ENST00000299185 SMIM9A6NGZ8 99 aa4.57□□□□□ -1.68
DEPDC4-201ENST00000299185 M0R2P5 195 aa4.57□□□□□ -1.68
DEPDC4-201ENST00000299185 NXPH4O95158 308 aa4.57□□□□□ -1.68
DEPDC4-201ENST00000299185 MT-ND4LP03901 98 aa4.57□□□□□ -1.68
DEPDC4-201ENST00000299185 MGPP08493 103 aa4.57□□□□□ -1.68
DEPDC4-201ENST00000299185 NHLRC4P0CG21 123 aaPredicted RBP4.57□□□□□ -1.68
DEPDC4-201ENST00000299185 P0DMU3 169 aa4.57□□□□□ -1.68
DEPDC4-201ENST00000299185 FAM231AP0DMU4 169 aa4.57□□□□□ -1.68
DEPDC4-201ENST00000299185 FAM231CP0DMU5 169 aa4.57□□□□□ -1.68
DEPDC4-201ENST00000299185 RPS20P60866 119 aaKnown RBP4.57□□□□□ -1.68
DEPDC4-201ENST00000299185 KRTAP15-1Q3LI76 137 aa4.57□□□□□ -1.68
DEPDC4-201ENST00000299185 ZNF876PQ49A33 203 aa4.57□□□□□ -1.68
DEPDC4-201ENST00000299185 TMEM88Q6PEY1 159 aa4.57□□□□□ -1.68
DEPDC4-201ENST00000299185 ZNF493Q6ZR52 646 aa4.57□□□□□ -1.68
DEPDC4-201ENST00000299185 Q6ZSN1 163 aa4.57□□□□□ -1.68
DEPDC4-201ENST00000299185 NUP35Q8NFH5 326 aa4.57□□□□□ -1.68
DEPDC4-201ENST00000299185 C11orf45Q8TAV5 145 aa4.57□□□□□ -1.68
DEPDC4-201ENST00000299185 TSKUQ8WUA8 353 aa4.57□□□□□ -1.68
DEPDC4-201ENST00000299185 IL36BQ9NZH7 164 aa4.57□□□□□ -1.68
DEPDC4-201ENST00000299185 TMA7Q9Y2S6 64 aaKnown RBP4.57□□□□□ -1.68
DEPDC4-201ENST00000299185 PHLDA3Q9Y5J5 127 aa4.57□□□□□ -1.68
DEPDC4-201ENST00000299185 PCLOQ9Y6V0 5065 aa4.56□□□□□ -1.68
DEPDC4-201ENST00000299185 TRAV26-2A0A0B4J265 109 aa4.56□□□□□ -1.68
DEPDC4-201ENST00000299185 A0A1W2PPQ1 181 aa4.56□□□□□ -1.68
DEPDC4-201ENST00000299185 SMIM27A0A1W2PRY6 76 aa4.56□□□□□ -1.68
DEPDC4-201ENST00000299185 LYRM9A8MSI8 78 aa4.56□□□□□ -1.68
DEPDC4-201ENST00000299185 F5H768 121 aa4.56□□□□□ -1.68
DEPDC4-201ENST00000299185 SMKR1H3BMG3 65 aa4.56□□□□□ -1.68
DEPDC4-201ENST00000299185 PPP1R2P9O14990 202 aa4.56□□□□□ -1.68
DEPDC4-201ENST00000299185 RS1O15537 224 aa4.56□□□□□ -1.68
DEPDC4-201ENST00000299185 GAS8-AS1O95177 125 aa4.56□□□□□ -1.68
DEPDC4-201ENST00000299185 NCR2O95944 276 aa4.56□□□□□ -1.68
DEPDC4-201ENST00000299185 CXCL1P09341 107 aa4.56□□□□□ -1.68
DEPDC4-201ENST00000299185 OR5AL1P0C617 328 aa4.56□□□□□ -1.68
DEPDC4-201ENST00000299185 SPART-AS1P0CW21 52 aa4.56□□□□□ -1.68
DEPDC4-201ENST00000299185 DAZ2Q13117 558 aaKnown RBP4.56□□□□□ -1.68
DEPDC4-201ENST00000299185 RNF151Q2KHN1 245 aa4.56□□□□□ -1.68
DEPDC4-201ENST00000299185 CT83Q5H943 113 aa4.56□□□□□ -1.68
DEPDC4-201ENST00000299185 DNLZQ5SXM8 178 aa4.56□□□□□ -1.68
DEPDC4-201ENST00000299185 SPANXN1Q5VSR9 72 aa4.56□□□□□ -1.68
DEPDC4-201ENST00000299185 CFAP126Q5VTH2 177 aa4.56□□□□□ -1.68
DEPDC4-201ENST00000299185 ZFP82Q8N141 532 aa4.56□□□□□ -1.68
DEPDC4-201ENST00000299185 C14orf178Q8N769 122 aaPredicted RBP4.56□□□□□ -1.68
DEPDC4-201ENST00000299185 DEFB104AQ8WTQ1 72 aa4.56□□□□□ -1.68
DEPDC4-201ENST00000299185 SMCO4Q9NRQ5 59 aa4.56□□□□□ -1.68
DEPDC4-201ENST00000299185 Q9UF83 564 aa4.56□□□□□ -1.68
DEPDC4-201ENST00000299185 NACAE9PAV3 2078 aa4.56□□□□□ -1.68
DEPDC4-201ENST00000299185 A0A096LPF7 62 aa4.55□□□□□ -1.68
DEPDC4-201ENST00000299185 TGIF2-C20orf24A0A0A6YYL0 155 aa4.55□□□□□ -1.68
DEPDC4-201ENST00000299185 A8MWL6 223 aa4.55□□□□□ -1.68
DEPDC4-201ENST00000299185 GATA1P15976 413 aaPredicted RBP4.55□□□□□ -1.68
DEPDC4-201ENST00000299185 EVI2AP22794 236 aa4.55□□□□□ -1.68
DEPDC4-201ENST00000299185 CAMPP49913 170 aa4.55□□□□□ -1.68
DEPDC4-201ENST00000299185 ZNF56Q15929 161 aa4.55□□□□□ -1.68
DEPDC4-201ENST00000299185 UFSP1Q6NVU6 142 aa4.55□□□□□ -1.68
DEPDC4-201ENST00000299185 IMMP2LQ96T52 175 aa4.55□□□□□ -1.68
DEPDC4-201ENST00000299185 SPXQ9BT56 116 aa4.55□□□□□ -1.68
DEPDC4-201ENST00000299185 TRAV4A0A0B4J268 109 aa4.54□□□□□ -1.68
DEPDC4-201ENST00000299185 A0A1B0GXF2 115 aa4.54□□□□□ -1.68
DEPDC4-201ENST00000299185 XKRY2A2RUG3 117 aa4.54□□□□□ -1.68
DEPDC4-201ENST00000299185 CRYGDP07320 174 aa4.54□□□□□ -1.68
DEPDC4-201ENST00000299185 NTF3P20783 257 aa4.54□□□□□ -1.68
DEPDC4-201ENST00000299185 LINC00315P59091 139 aa4.54□□□□□ -1.68
DEPDC4-201ENST00000299185 TWIST1Q15672 202 aa4.54□□□□□ -1.68
DEPDC4-201ENST00000299185 NEGR1Q7Z3B1 354 aa4.54□□□□□ -1.68
DEPDC4-201ENST00000299185 AMN1Q8IY45 258 aa4.54□□□□□ -1.68
DEPDC4-201ENST00000299185 OR4C5Q8NGB2 326 aa4.54□□□□□ -1.68
DEPDC4-201ENST00000299185 PHLDA1Q8WV24 401 aaPredicted RBP4.54□□□□□ -1.68
DEPDC4-201ENST00000299185 RASL10AQ92737 203 aa4.54□□□□□ -1.68
DEPDC4-201ENST00000299185 AP1S3Q96PC3 154 aa4.54□□□□□ -1.68
DEPDC4-201ENST00000299185 KIF25-AS1Q9Y6Z4 181 aa4.54□□□□□ -1.68
DEPDC4-201ENST00000299185 TRAV26-1A0A087WT03 109 aa4.53□□□□□ -1.68
DEPDC4-201ENST00000299185 DEFB131BA0A096LNP1 70 aa4.53□□□□□ -1.68
DEPDC4-201ENST00000299185 TRAV10A0A0B4J240 114 aa4.53□□□□□ -1.68
DEPDC4-201ENST00000299185 TRGV4A0A0C4DH28 118 aa4.53□□□□□ -1.68
DEPDC4-201ENST00000299185 A0A1B0GUT8 65 aa4.53□□□□□ -1.68
DEPDC4-201ENST00000299185 FAM231BA6NCW3 169 aa4.53□□□□□ -1.68
DEPDC4-201ENST00000299185 GAGE12JA6NER3 117 aa4.53□□□□□ -1.68
DEPDC4-201ENST00000299185 ATP5G1P05496 136 aa4.53□□□□□ -1.68
DEPDC4-201ENST00000299185 RPS10P46783 165 aaKnown RBP4.53□□□□□ -1.68
DEPDC4-201ENST00000299185 CACNG7P62955 275 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 89.3 ms