RNA–Protein interactions for RNA: ENST00000297267.13

FNDC1-201, Transcript of fibronectin type III domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FNDC1, Length 6,552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC1-201ENST00000297267 TEX22C9J3V5 150 aa11.89□□□□□ -0.51
FNDC1-201ENST00000297267 LINC00322Q6ZN03 302 aaPredicted RBP11.89□□□□□ -0.51
FNDC1-201ENST00000297267 TRAV13-2A0A0B4J235 113 aa11.89□□□□□ -0.51
FNDC1-201ENST00000297267 PIP4P1Q86T03 277 aa11.88□□□□□ -0.51
FNDC1-201ENST00000297267 C22orf34Q6ZV56 151 aa11.88□□□□□ -0.51
FNDC1-201ENST00000297267 C11orf52Q96A22 123 aa11.88□□□□□ -0.51
FNDC1-201ENST00000297267 TRAV26-1A0A087WT03 109 aa11.88□□□□□ -0.51
FNDC1-201ENST00000297267 DEFB113Q30KQ7 82 aa11.88□□□□□ -0.51
FNDC1-201ENST00000297267 IGKV1-17P01599 117 aa11.88□□□□□ -0.51
FNDC1-201ENST00000297267 RNF183Q96D59 192 aa11.88□□□□□ -0.51
FNDC1-201ENST00000297267 FAM167A-AS1Q96KT0 104 aa11.87□□□□□ -0.51
FNDC1-201ENST00000297267 SPTA1P02549 2419 aa11.87□□□□□ -0.51
FNDC1-201ENST00000297267 IGLV11-55A0A075B6I3 123 aa11.87□□□□□ -0.51
FNDC1-201ENST00000297267 HIGD2BQ4VC39 106 aa11.87□□□□□ -0.51
FNDC1-201ENST00000297267 NCOA6Q14686 2063 aaPredicted RBP11.87□□□□□ -0.51
FNDC1-201ENST00000297267 GATA3P23771 443 aa11.87□□□□□ -0.51
FNDC1-201ENST00000297267 DEFB125Q8N687 156 aa11.87□□□□□ -0.51
FNDC1-201ENST00000297267 SIRPDQ9H106 197 aa11.87□□□□□ -0.51
FNDC1-201ENST00000297267 PYGO2Q9BRQ0 406 aa11.87□□□□□ -0.51
FNDC1-201ENST00000297267 SLC25A29Q8N8R3 303 aa11.87□□□□□ -0.51
FNDC1-201ENST00000297267 KRTAP27-1Q3LI81 207 aa11.86□□□□□ -0.51
FNDC1-201ENST00000297267 LYPD6BQ8NI32 183 aa11.86□□□□□ -0.51
FNDC1-201ENST00000297267 ZNF80P51504 273 aaPredicted RBP11.86□□□□□ -0.51
FNDC1-201ENST00000297267 C10orf99Q6UWK7 81 aa11.86□□□□□ -0.51
FNDC1-201ENST00000297267 RBM3P98179 157 aaKnown RBP11.86□□□□□ -0.51
FNDC1-201ENST00000297267 C19orf84I3L1E1 186 aa11.86□□□□□ -0.51
FNDC1-201ENST00000297267 RHOHQ15669 191 aa11.86□□□□□ -0.51
FNDC1-201ENST00000297267 ATP5G1P05496 136 aa11.86□□□□□ -0.51
FNDC1-201ENST00000297267 CAMK2N2Q96S95 79 aa11.86□□□□□ -0.51
FNDC1-201ENST00000297267 PCNX1Q96RV3 2341 aa11.86□□□□□ -0.51
FNDC1-201ENST00000297267 Q6ZPA2 131 aa11.85□□□□□ -0.51
FNDC1-201ENST00000297267 FAM110AQ9BQ89 295 aa11.85□□□□□ -0.51
FNDC1-201ENST00000297267 EP300Q09472 2414 aaPredicted RBP11.85□□□□□ -0.51
FNDC1-201ENST00000297267 C20orf78Q9BR46 151 aa11.85□□□□□ -0.51
FNDC1-201ENST00000297267 ZMAT4Q9H898 229 aa11.85□□□□□ -0.51
FNDC1-201ENST00000297267 PROK1P58294 105 aa11.85□□□□□ -0.51
FNDC1-201ENST00000297267 CACNA1BQ00975 2339 aa11.85□□□□□ -0.51
FNDC1-201ENST00000297267 C16orf54Q6UWD8 224 aa11.85□□□□□ -0.51
FNDC1-201ENST00000297267 NFE4Q86UQ8 179 aa11.85□□□□□ -0.51
FNDC1-201ENST00000297267 SND1-IT1Q9HBX3 110 aa11.85□□□□□ -0.51
FNDC1-201ENST00000297267 HHLA3Q9XRX5 114 aa11.84□□□□□ -0.51
FNDC1-201ENST00000297267 GDF5OSQ5U4N7 250 aa11.84□□□□□ -0.51
FNDC1-201ENST00000297267 TMEM61Q8N0U2 210 aa11.84□□□□□ -0.51
FNDC1-201ENST00000297267 NCOR1O75376 2440 aa11.84□□□□□ -0.51
FNDC1-201ENST00000297267 C2orf70A6NJV1 201 aa11.83□□□□□ -0.52
FNDC1-201ENST00000297267 A0A096LNI7 61 aa11.83□□□□□ -0.52
FNDC1-201ENST00000297267 SLPIP03973 132 aa11.83□□□□□ -0.52
FNDC1-201ENST00000297267 ATP6V0E2Q8NHE4 81 aa11.83□□□□□ -0.52
FNDC1-201ENST00000297267 DOPEY2Q9Y3R5 2298 aa11.83□□□□□ -0.52
FNDC1-201ENST00000297267 SLX1AQ9BQ83 275 aa11.83□□□□□ -0.52
FNDC1-201ENST00000297267 IGHG2P01859 326 aa11.82□□□□□ -0.52
FNDC1-201ENST00000297267 ZNF503Q96F45 646 aa11.82□□□□□ -0.52
FNDC1-201ENST00000297267 C20orf173Q96LM9 149 aa11.82□□□□□ -0.52
FNDC1-201ENST00000297267 SCXQ7RTU7 201 aa11.82□□□□□ -0.52
FNDC1-201ENST00000297267 IGKV2D-26A0A0A0MRZ7 120 aa11.82□□□□□ -0.52
FNDC1-201ENST00000297267 WI2-2373I1.2A0A1W2PRP0 233 aa11.82□□□□□ -0.52
FNDC1-201ENST00000297267 ALPK3Q96L96 1907 aa11.82□□□□□ -0.52
FNDC1-201ENST00000297267 TAX1BP3O14907 124 aa11.81□□□□□ -0.52
FNDC1-201ENST00000297267 INAFM2P0DMQ5 153 aa11.81□□□□□ -0.52
FNDC1-201ENST00000297267 KLK12Q9UKR0 248 aa11.81□□□□□ -0.52
FNDC1-201ENST00000297267 CEP192Q8TEP8 1941 aa11.81□□□□□ -0.52
FNDC1-201ENST00000297267 SHANK1Q9Y566 2161 aa11.81□□□□□ -0.52
FNDC1-201ENST00000297267 TIRAPP58753 221 aa11.81□□□□□ -0.52
FNDC1-201ENST00000297267 C11orf86A6NJI1 115 aa11.81□□□□□ -0.52
FNDC1-201ENST00000297267 KAAG1Q9UBP8 84 aa11.81□□□□□ -0.52
FNDC1-201ENST00000297267 FAM236AA0A1B0GUQ0 79 aa11.8□□□□□ -0.52
FNDC1-201ENST00000297267 FAM236BA0A1B0GV22 79 aa11.8□□□□□ -0.52
FNDC1-201ENST00000297267 CNOT1A5YKK6 2376 aaKnown RBP11.8□□□□□ -0.52
FNDC1-201ENST00000297267 Q6ZUT4 128 aa11.8□□□□□ -0.52
FNDC1-201ENST00000297267 KIR2DL5BA0A0G2JN68 375 aa11.8□□□□□ -0.52
FNDC1-201ENST00000297267 KIR2DL5BA0A0G2JPC4 375 aa11.8□□□□□ -0.52
FNDC1-201ENST00000297267 KIR2DL5AQ8N109 375 aa11.8□□□□□ -0.52
FNDC1-201ENST00000297267 COX7A2LO14548 114 aa11.79□□□□□ -0.52
FNDC1-201ENST00000297267 C1orf43Q9BWL3 253 aa11.79□□□□□ -0.52
FNDC1-201ENST00000297267 A8MZ25 164 aa11.79□□□□□ -0.52
FNDC1-201ENST00000297267 C9orf47Q6ZRZ4 202 aa11.79□□□□□ -0.52
FNDC1-201ENST00000297267 WFDC9Q8NEX5 89 aa11.79□□□□□ -0.52
FNDC1-201ENST00000297267 J3QLI3 93 aa11.79□□□□□ -0.52
FNDC1-201ENST00000297267 VSIG2Q96IQ7 327 aa11.79□□□□□ -0.52
FNDC1-201ENST00000297267 ETDCA0A1B0GVM5 59 aa11.79□□□□□ -0.52
FNDC1-201ENST00000297267 LRCOL1A6NCL2 159 aa11.79□□□□□ -0.52
FNDC1-201ENST00000297267 TOMM6Q96B49 74 aa11.79□□□□□ -0.52
FNDC1-201ENST00000297267 C16orf74Q96GX8 76 aa11.78□□□□□ -0.52
FNDC1-201ENST00000297267 FREM1Q5H8C1 2179 aa11.78□□□□□ -0.52
FNDC1-201ENST00000297267 LECT2O14960 151 aa11.78□□□□□ -0.52
FNDC1-201ENST00000297267 C18orf65Q6ZTR6 163 aa11.78□□□□□ -0.52
FNDC1-201ENST00000297267 DCANP1Q8TF63 244 aa11.78□□□□□ -0.52
FNDC1-201ENST00000297267 C14orf132Q9NPU4 83 aa11.78□□□□□ -0.52
FNDC1-201ENST00000297267 PCNX2A6NKB5 2137 aa11.78□□□□□ -0.52
FNDC1-201ENST00000297267 IGKV2-24A0A0C4DH68 120 aa11.78□□□□□ -0.52
FNDC1-201ENST00000297267 LGALS9O00182 355 aa11.78□□□□□ -0.52
FNDC1-201ENST00000297267 SMIM20Q8N5G0 67 aa11.77□□□□□ -0.52
FNDC1-201ENST00000297267 A0A1B0GX51 115 aa11.77□□□□□ -0.53
FNDC1-201ENST00000297267 MIR7-3HGQ8N6C7 128 aa11.77□□□□□ -0.53
FNDC1-201ENST00000297267 LINC01545Q5VT33 79 aa11.77□□□□□ -0.53
FNDC1-201ENST00000297267 LINC00526Q96FQ7 95 aa11.76□□□□□ -0.53
FNDC1-201ENST00000297267 POU2AF1Q16633 256 aa11.76□□□□□ -0.53
FNDC1-201ENST00000297267 LINC00482Q8N8I6 264 aa11.76□□□□□ -0.53
FNDC1-201ENST00000297267 IGKV1D-37A0A075B6S9 117 aa11.76□□□□□ -0.53
FNDC1-201ENST00000297267 A0A0J9YWU9 116 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 81.4 ms