RNA–Protein interactions for RNA: ENST00000289292.11

SHROOM4-201, Transcript of shroom family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHROOM4, Length 6,261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4-201ENST00000289292 P0C879 139 aa11.8□□□□□ -0.52
SHROOM4-201ENST00000289292 A0A1W2PNU3 283 aaPredicted RBP11.8□□□□□ -0.52
SHROOM4-201ENST00000289292 TCL1BO95988 128 aa11.8□□□□□ -0.52
SHROOM4-201ENST00000289292 NBL1P41271 181 aa11.8□□□□□ -0.52
SHROOM4-201ENST00000289292 TRBV12-3P01733 135 aa11.8□□□□□ -0.52
SHROOM4-201ENST00000289292 E9PLD3 99 aa11.79□□□□□ -0.52
SHROOM4-201ENST00000289292 IGHG2P01859 326 aa11.79□□□□□ -0.52
SHROOM4-201ENST00000289292 A0A1B0GXF2 115 aa11.79□□□□□ -0.52
SHROOM4-201ENST00000289292 J3KT08 172 aa11.79□□□□□ -0.52
SHROOM4-201ENST00000289292 RNF114Q9Y508 228 aa11.79□□□□□ -0.52
SHROOM4-201ENST00000289292 Q8N7P7 452 aa11.79□□□□□ -0.52
SHROOM4-201ENST00000289292 LENEPQ9Y5L5 61 aa11.79□□□□□ -0.52
SHROOM4-201ENST00000289292 LGALS9O00182 355 aa11.79□□□□□ -0.52
SHROOM4-201ENST00000289292 TMEM258P61165 79 aa11.79□□□□□ -0.52
SHROOM4-201ENST00000289292 CADP27708 2225 aa11.79□□□□□ -0.52
SHROOM4-201ENST00000289292 CEMP1Q6PRD7 247 aaPredicted RBP11.78□□□□□ -0.52
SHROOM4-201ENST00000289292 IGHV4-61A0A0C4DH41 118 aa11.78□□□□□ -0.52
SHROOM4-201ENST00000289292 C5orf56Q8N8D9 126 aa11.78□□□□□ -0.52
SHROOM4-201ENST00000289292 H3BUA1 57 aa11.78□□□□□ -0.52
SHROOM4-201ENST00000289292 ZFP36P26651 326 aaKnown RBP11.78□□□□□ -0.52
SHROOM4-201ENST00000289292 C9orf47Q6ZRZ4 202 aa11.78□□□□□ -0.52
SHROOM4-201ENST00000289292 Q6ZUT4 128 aa11.78□□□□□ -0.52
SHROOM4-201ENST00000289292 RBX1P62877 108 aa11.77□□□□□ -0.52
SHROOM4-201ENST00000289292 C5orf47Q569G3 176 aa11.77□□□□□ -0.52
SHROOM4-201ENST00000289292 SND1-IT1Q9HBX3 110 aa11.77□□□□□ -0.52
SHROOM4-201ENST00000289292 TRBV10-2A0A0K0K1G8 114 aa11.77□□□□□ -0.52
SHROOM4-201ENST00000289292 K7EQD1 137 aa11.77□□□□□ -0.52
SHROOM4-201ENST00000289292 NCR3O14931 201 aa11.77□□□□□ -0.52
SHROOM4-201ENST00000289292 ESM1Q9NQ30 184 aa11.77□□□□□ -0.53
SHROOM4-201ENST00000289292 MED13Q9UHV7 2174 aa11.77□□□□□ -0.53
SHROOM4-201ENST00000289292 COL6A6A6NMZ7 2263 aa11.77□□□□□ -0.53
SHROOM4-201ENST00000289292 ATOX1O00244 68 aa11.76□□□□□ -0.53
SHROOM4-201ENST00000289292 PROP1O75360 226 aa11.76□□□□□ -0.53
SHROOM4-201ENST00000289292 COX7B2Q8TF08 81 aa11.76□□□□□ -0.53
SHROOM4-201ENST00000289292 IGHV4-28A0A0C4DH34 117 aa11.76□□□□□ -0.53
SHROOM4-201ENST00000289292 MDFICQ9P1T7 246 aa11.76□□□□□ -0.53
SHROOM4-201ENST00000289292 GVINP1Q7Z2Y8 2422 aa11.76□□□□□ -0.53
SHROOM4-201ENST00000289292 IGHV4OR15-8A0A075B7B6 117 aa11.76□□□□□ -0.53
SHROOM4-201ENST00000289292 A0A087WW49 117 aa11.76□□□□□ -0.53
SHROOM4-201ENST00000289292 ELANEP08246 267 aa11.76□□□□□ -0.53
SHROOM4-201ENST00000289292 SPTBN1Q01082 2364 aaKnown RBP11.76□□□□□ -0.53
SHROOM4-201ENST00000289292 UNQ9165/PRO28630Q6UXU0 137 aa11.76□□□□□ -0.53
SHROOM4-201ENST00000289292 PCNX3Q9H6A9 2034 aa11.76□□□□□ -0.53
SHROOM4-201ENST00000289292 PIP4P1Q86T03 277 aa11.76□□□□□ -0.53
SHROOM4-201ENST00000289292 NCOR1O75376 2440 aa11.75□□□□□ -0.53
SHROOM4-201ENST00000289292 IGHV4-30-2A0A087WSY4 118 aa11.75□□□□□ -0.53
SHROOM4-201ENST00000289292 ATP6V0E2Q8NHE4 81 aa11.75□□□□□ -0.53
SHROOM4-201ENST00000289292 NRGNQ92686 78 aa11.75□□□□□ -0.53
SHROOM4-201ENST00000289292 NDUFA11Q86Y39 141 aa11.75□□□□□ -0.53
SHROOM4-201ENST00000289292 HERV-K104P63124 156 aa11.75□□□□□ -0.53
SHROOM4-201ENST00000289292 VPREB3Q9UKI3 123 aa11.75□□□□□ -0.53
SHROOM4-201ENST00000289292 NFE4Q86UQ8 179 aa11.75□□□□□ -0.53
SHROOM4-201ENST00000289292 P0DMU3 169 aa11.74□□□□□ -0.53
SHROOM4-201ENST00000289292 FAM231AP0DMU4 169 aa11.74□□□□□ -0.53
SHROOM4-201ENST00000289292 FAM231CP0DMU5 169 aa11.74□□□□□ -0.53
SHROOM4-201ENST00000289292 IGFL2Q6UWQ7 119 aa11.74□□□□□ -0.53
SHROOM4-201ENST00000289292 WNK2Q9Y3S1 2297 aa11.74□□□□□ -0.53
SHROOM4-201ENST00000289292 CRYGBP07316 175 aa11.74□□□□□ -0.53
SHROOM4-201ENST00000289292 SPANXB1Q9NS25 103 aaPredicted RBP11.74□□□□□ -0.53
SHROOM4-201ENST00000289292 EP300Q09472 2414 aaPredicted RBP11.74□□□□□ -0.53
SHROOM4-201ENST00000289292 CCL24O00175 119 aa11.73□□□□□ -0.53
SHROOM4-201ENST00000289292 PSMB8P28062 276 aa11.73□□□□□ -0.53
SHROOM4-201ENST00000289292 TMEM61Q8N0U2 210 aa11.73□□□□□ -0.53
SHROOM4-201ENST00000289292 IGLV1-47P01700 117 aa11.73□□□□□ -0.53
SHROOM4-201ENST00000289292 Q9HAA7 133 aa11.73□□□□□ -0.53
SHROOM4-201ENST00000289292 CNOT1A5YKK6 2376 aaKnown RBP11.73□□□□□ -0.53
SHROOM4-201ENST00000289292 GTF3C1Q12789 2109 aa11.73□□□□□ -0.53
SHROOM4-201ENST00000289292 GYPEP15421 78 aa11.72□□□□□ -0.53
SHROOM4-201ENST00000289292 HIST2H2BCQ6DN03 193 aa11.72□□□□□ -0.53
SHROOM4-201ENST00000289292 FANCD2OSQ96PS1 177 aa11.72□□□□□ -0.53
SHROOM4-201ENST00000289292 J3QLI3 93 aa11.72□□□□□ -0.53
SHROOM4-201ENST00000289292 MBD6Q96DN6 1003 aa11.72□□□□□ -0.53
SHROOM4-201ENST00000289292 IGKV2D-24A0A075B6R9 120 aa11.71□□□□□ -0.53
SHROOM4-201ENST00000289292 NDUFV3P56181 108 aaKnown RBP11.71□□□□□ -0.53
SHROOM4-201ENST00000289292 APOC4P55056 127 aa11.71□□□□□ -0.53
SHROOM4-201ENST00000289292 SPTBN2O15020 2390 aa11.71□□□□□ -0.53
SHROOM4-201ENST00000289292 TEX49A0A1B0GTD5 131 aa11.71□□□□□ -0.53
SHROOM4-201ENST00000289292 EIF4EBP1Q13541 118 aaPredicted RBP11.71□□□□□ -0.53
SHROOM4-201ENST00000289292 SPANXCQ9NY87 97 aa11.71□□□□□ -0.54
SHROOM4-201ENST00000289292 TRBV6-1A0A0K0K1D8 114 aa11.7□□□□□ -0.54
SHROOM4-201ENST00000289292 LINC01548A6NM66 108 aa11.7□□□□□ -0.54
SHROOM4-201ENST00000289292 LECT2O14960 151 aa11.7□□□□□ -0.54
SHROOM4-201ENST00000289292 RPL18AQ02543 176 aaKnown RBP11.7□□□□□ -0.54
SHROOM4-201ENST00000289292 IGHV3-30P01768 117 aa11.7□□□□□ -0.54
SHROOM4-201ENST00000289292 IGHV3-33P01772 117 aa11.7□□□□□ -0.54
SHROOM4-201ENST00000289292 IGHV3-30-3P0DP02 117 aa11.7□□□□□ -0.54
SHROOM4-201ENST00000289292 IGHV3-30-5P0DP03 117 aa11.7□□□□□ -0.54
SHROOM4-201ENST00000289292 IGF1P05019 195 aa11.69□□□□□ -0.54
SHROOM4-201ENST00000289292 MAPKAPK5-AS1Q8N8E1 139 aa11.69□□□□□ -0.54
SHROOM4-201ENST00000289292 IGKV2D-26A0A0A0MRZ7 120 aa11.69□□□□□ -0.54
SHROOM4-201ENST00000289292 TIMM17AQ99595 171 aa11.69□□□□□ -0.54
SHROOM4-201ENST00000289292 MALRD1Q5VYJ5 2156 aa11.68□□□□□ -0.54
SHROOM4-201ENST00000289292 C14orf132Q9NPU4 83 aa11.68□□□□□ -0.54
SHROOM4-201ENST00000289292 NDUFS5O43920 106 aa11.68□□□□□ -0.54
SHROOM4-201ENST00000289292 ADORA2A-AS1P86434 159 aa11.68□□□□□ -0.54
SHROOM4-201ENST00000289292 CRIP1P50238 77 aa11.68□□□□□ -0.54
SHROOM4-201ENST00000289292 CCDC140Q96MF4 163 aa11.68□□□□□ -0.54
SHROOM4-201ENST00000289292 DAZ2Q13117 558 aaKnown RBP11.67□□□□□ -0.54
SHROOM4-201ENST00000289292 DAZ4Q86SG3 579 aaKnown RBP11.67□□□□□ -0.54
SHROOM4-201ENST00000289292 DAZ3Q9NR90 486 aaKnown RBP11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms