RNA–Protein interactions for RNA: ENST00000286835.11

SCAF4-201, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCAF4, Length 4,193 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-201ENST00000286835 DSCR9P59020 149 aa10.23□□□□□ -0.77
SCAF4-201ENST00000286835 UNQ9165/PRO28630Q6UXU0 137 aa10.23□□□□□ -0.77
SCAF4-201ENST00000286835 ADARB2-AS1A8MUL3 147 aa10.22□□□□□ -0.77
SCAF4-201ENST00000286835 PRR9Q5T870 116 aa10.22□□□□□ -0.77
SCAF4-201ENST00000286835 NRACQ8N912 160 aa10.22□□□□□ -0.77
SCAF4-201ENST00000286835 Q96MF0 132 aa10.22□□□□□ -0.77
SCAF4-201ENST00000286835 PPP1R17O96001 155 aa10.22□□□□□ -0.77
SCAF4-201ENST00000286835 UBE2E1P51965 193 aa10.22□□□□□ -0.77
SCAF4-201ENST00000286835 MOB4Q9Y3A3 225 aa10.22□□□□□ -0.77
SCAF4-201ENST00000286835 IGHV4-30-2A0A087WSY4 118 aa10.22□□□□□ -0.77
SCAF4-201ENST00000286835 SDHAF1A6NFY7 115 aa10.22□□□□□ -0.77
SCAF4-201ENST00000286835 RBAKDNA6NC62 111 aa10.22□□□□□ -0.77
SCAF4-201ENST00000286835 ZZEF1O43149 2961 aa10.22□□□□□ -0.77
SCAF4-201ENST00000286835 LY6G5BQ8NDX9 201 aa10.22□□□□□ -0.77
SCAF4-201ENST00000286835 RASL10AQ92737 203 aa10.21□□□□□ -0.77
SCAF4-201ENST00000286835 ZFAND3Q9H8U3 227 aa10.21□□□□□ -0.77
SCAF4-201ENST00000286835 A0A0U1RRA0 63 aa10.21□□□□□ -0.78
SCAF4-201ENST00000286835 C11orf86A6NJI1 115 aa10.21□□□□□ -0.78
SCAF4-201ENST00000286835 IGHV7-4-1A0A0J9YVY3 117 aa10.21□□□□□ -0.78
SCAF4-201ENST00000286835 ANAPC13Q9BS18 74 aa10.21□□□□□ -0.78
SCAF4-201ENST00000286835 C20orf173Q96LM9 149 aa10.2□□□□□ -0.78
SCAF4-201ENST00000286835 ZNF48Q96MX3 618 aaPredicted RBP10.2□□□□□ -0.78
SCAF4-201ENST00000286835 OPRPNQ99935 248 aaPredicted RBP10.2□□□□□ -0.78
SCAF4-201ENST00000286835 SPXQ9BT56 116 aa10.2□□□□□ -0.78
SCAF4-201ENST00000286835 VCX2Q9H322 139 aa10.2□□□□□ -0.78
SCAF4-201ENST00000286835 KLK9Q9UKQ9 250 aa10.2□□□□□ -0.78
SCAF4-201ENST00000286835 ODF3BA8MYP8 253 aa10.2□□□□□ -0.78
SCAF4-201ENST00000286835 VCYO14598 125 aa10.19□□□□□ -0.78
SCAF4-201ENST00000286835 FOXI1Q12951 378 aa10.19□□□□□ -0.78
SCAF4-201ENST00000286835 PMVKQ15126 192 aa10.19□□□□□ -0.78
SCAF4-201ENST00000286835 PAPPA-AS1Q5QFB9 102 aa10.19□□□□□ -0.78
SCAF4-201ENST00000286835 DGAT2L7PQ6IED9 249 aa10.19□□□□□ -0.78
SCAF4-201ENST00000286835 LINC01356Q8N9X3 169 aa10.19□□□□□ -0.78
SCAF4-201ENST00000286835 ERG28Q9UKR5 140 aa10.19□□□□□ -0.78
SCAF4-201ENST00000286835 RNASE13Q5GAN3 156 aaKnown RBP10.19□□□□□ -0.78
SCAF4-201ENST00000286835 IGHV1-69DA0A0B4J2H0 117 aa10.19□□□□□ -0.78
SCAF4-201ENST00000286835 IGHV1-69P01742 117 aa10.19□□□□□ -0.78
SCAF4-201ENST00000286835 ZNF876PQ49A33 203 aa10.19□□□□□ -0.78
SCAF4-201ENST00000286835 CENPVL3A0A0U1RRI6 287 aa10.18□□□□□ -0.78
SCAF4-201ENST00000286835 SNCGO76070 127 aa10.18□□□□□ -0.78
SCAF4-201ENST00000286835 TOMM6Q96B49 74 aa10.18□□□□□ -0.78
SCAF4-201ENST00000286835 C9orf47Q6ZRZ4 202 aa10.18□□□□□ -0.78
SCAF4-201ENST00000286835 TEX29Q8N6K0 151 aa10.18□□□□□ -0.78
SCAF4-201ENST00000286835 C1QTNF4Q9BXJ3 329 aa10.18□□□□□ -0.78
SCAF4-201ENST00000286835 ZMAT4Q9H898 229 aa10.18□□□□□ -0.78
SCAF4-201ENST00000286835 IGHV3OR16-12A0A075B7B8 117 aa10.18□□□□□ -0.78
SCAF4-201ENST00000286835 TRAV26-1A0A087WT03 109 aa10.18□□□□□ -0.78
SCAF4-201ENST00000286835 TTC32Q5I0X7 151 aa10.18□□□□□ -0.78
SCAF4-201ENST00000286835 CNFNQ9BYD5 112 aa10.17□□□□□ -0.78
SCAF4-201ENST00000286835 J3QQQ9 107 aa10.17□□□□□ -0.78
SCAF4-201ENST00000286835 TSPAN13O95857 204 aa10.17□□□□□ -0.78
SCAF4-201ENST00000286835 KNCNA6PVL3 124 aa10.17□□□□□ -0.78
SCAF4-201ENST00000286835 MT-ATP8P03928 68 aa10.17□□□□□ -0.78
SCAF4-201ENST00000286835 SPINK13Q1W4C9 94 aa10.17□□□□□ -0.78
SCAF4-201ENST00000286835 PPDPFLQ8WWR9 84 aa10.17□□□□□ -0.78
SCAF4-201ENST00000286835 ANKRD17O75179 2603 aaKnown RBP10.17□□□□□ -0.78
SCAF4-201ENST00000286835 NEXN-AS1Q8NBZ9 246 aa10.16□□□□□ -0.78
SCAF4-201ENST00000286835 PRO1854Q9UHT4 67 aa10.16□□□□□ -0.78
SCAF4-201ENST00000286835 TRAV12-1A0A0B4J245 112 aa10.16□□□□□ -0.78
SCAF4-201ENST00000286835 CLPSL1A2RUU4 121 aa10.16□□□□□ -0.78
SCAF4-201ENST00000286835 PHLDA1Q8WV24 401 aaPredicted RBP10.16□□□□□ -0.78
SCAF4-201ENST00000286835 IGLV2-18A0A075B6J9 118 aa10.15□□□□□ -0.78
SCAF4-201ENST00000286835 CD28P10747 220 aa10.15□□□□□ -0.78
SCAF4-201ENST00000286835 SRSF2Q01130 221 aaKnown RBP10.15□□□□□ -0.78
SCAF4-201ENST00000286835 TRBV7-3A0A075B6L6 115 aa10.15□□□□□ -0.78
SCAF4-201ENST00000286835 SNRPD3P62318 126 aaKnown RBP10.15□□□□□ -0.78
SCAF4-201ENST00000286835 HIST2H2BCQ6DN03 193 aa10.15□□□□□ -0.78
SCAF4-201ENST00000286835 SUMO4Q6EEV6 95 aa10.15□□□□□ -0.78
SCAF4-201ENST00000286835 CSMD1Q96PZ7 3565 aa10.15□□□□□ -0.78
SCAF4-201ENST00000286835 COL27A1Q8IZC6 1860 aaPredicted RBP10.15□□□□□ -0.78
SCAF4-201ENST00000286835 BLCAPP62952 87 aa10.15□□□□□ -0.78
SCAF4-201ENST00000286835 A4D1N5 150 aa10.15□□□□□ -0.79
SCAF4-201ENST00000286835 IGHV4-38-2P0DP08 117 aa10.15□□□□□ -0.79
SCAF4-201ENST00000286835 TMEM95Q3KNT9 176 aa10.15□□□□□ -0.79
SCAF4-201ENST00000286835 ZFAND6Q6FIF0 208 aa10.15□□□□□ -0.79
SCAF4-201ENST00000286835 CLUHP3Q96NS8 147 aa10.15□□□□□ -0.79
SCAF4-201ENST00000286835 TCL1BO95988 128 aa10.14□□□□□ -0.79
SCAF4-201ENST00000286835 TRPT1Q86TN4 253 aaKnown RBP10.14□□□□□ -0.79
SCAF4-201ENST00000286835 COX6CP09669 75 aa10.14□□□□□ -0.79
SCAF4-201ENST00000286835 SLC25A20O43772 301 aa10.14□□□□□ -0.79
SCAF4-201ENST00000286835 FAM223BA6NKX1 122 aa10.13□□□□□ -0.79
SCAF4-201ENST00000286835 Q6ZS46 218 aa10.13□□□□□ -0.79
SCAF4-201ENST00000286835 FAM223AQ8IWN6 122 aa10.13□□□□□ -0.79
SCAF4-201ENST00000286835 ZFAND2AQ8N6M9 145 aa10.13□□□□□ -0.79
SCAF4-201ENST00000286835 C5orf56Q8N8D9 126 aa10.13□□□□□ -0.79
SCAF4-201ENST00000286835 PIFOQ8TCI5 191 aa10.13□□□□□ -0.79
SCAF4-201ENST00000286835 SIRPDQ9H106 197 aa10.13□□□□□ -0.79
SCAF4-201ENST00000286835 DAZ1Q9NQZ3 744 aaKnown RBP10.13□□□□□ -0.79
SCAF4-201ENST00000286835 GAGE2BQ13066 116 aa10.13□□□□□ -0.79
SCAF4-201ENST00000286835 GAGE2EQ4V326 116 aa10.13□□□□□ -0.79
SCAF4-201ENST00000286835 ANKRD29Q8N6D5 301 aa10.13□□□□□ -0.79
SCAF4-201ENST00000286835 GAGE2DQ9UEU5 116 aa10.13□□□□□ -0.79
SCAF4-201ENST00000286835 TNFRSF18Q9Y5U5 241 aa10.13□□□□□ -0.79
SCAF4-201ENST00000286835 A0A0J9YXV3 536 aa10.12□□□□□ -0.79
SCAF4-201ENST00000286835 MORN3Q6PF18 240 aaPredicted RBP10.12□□□□□ -0.79
SCAF4-201ENST00000286835 NDUFA11Q86Y39 141 aa10.12□□□□□ -0.79
SCAF4-201ENST00000286835 Q8N6K4 173 aa10.12□□□□□ -0.79
SCAF4-201ENST00000286835 NTN5Q8WTR8 489 aaPredicted RBP10.12□□□□□ -0.79
SCAF4-201ENST00000286835 MRPL53Q96EL3 112 aaKnown RBP10.12□□□□□ -0.79
SCAF4-201ENST00000286835 TRBV20-1A0A075B6N2 111 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms