RNA–Protein interactions for RNA: ENST00000279452.10

CD44-204, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-204ENST00000279452 SNAI2O43623 268 aa4.52□□□□□ -1.69
CD44-204ENST00000279452 NXPH4O95158 308 aa4.52□□□□□ -1.69
CD44-204ENST00000279452 CACNG7P62955 275 aa4.52□□□□□ -1.69
CD44-204ENST00000279452 TWIST1Q15672 202 aa4.52□□□□□ -1.69
CD44-204ENST00000279452 TMEM241Q24JQ0 296 aa4.52□□□□□ -1.69
CD44-204ENST00000279452 OR10J3Q5JRS4 329 aa4.52□□□□□ -1.69
CD44-204ENST00000279452 SOHLH1Q5JUK2 328 aa4.52□□□□□ -1.69
CD44-204ENST00000279452 PIK3CD-AS1Q5SR53 167 aa4.52□□□□□ -1.69
CD44-204ENST00000279452 LYZL1Q6UWQ5 148 aa4.52□□□□□ -1.69
CD44-204ENST00000279452 SH2D6Q7Z4S9 175 aa4.52□□□□□ -1.69
CD44-204ENST00000279452 LINC01551Q86U37 167 aa4.52□□□□□ -1.69
CD44-204ENST00000279452 C15orf54Q8N8G6 183 aa4.52□□□□□ -1.69
CD44-204ENST00000279452 ZNRF2Q8NHG8 242 aa4.52□□□□□ -1.69
CD44-204ENST00000279452 Q9H8V8 135 aa4.52□□□□□ -1.69
CD44-204ENST00000279452 A0A1W2PPQ1 181 aa4.51□□□□□ -1.69
CD44-204ENST00000279452 A8MWL6 223 aa4.51□□□□□ -1.69
CD44-204ENST00000279452 C9JQL5 133 aa4.51□□□□□ -1.69
CD44-204ENST00000279452 F2Z2F3 143 aa4.51□□□□□ -1.69
CD44-204ENST00000279452 SIVA1O15304 175 aa4.51□□□□□ -1.69
CD44-204ENST00000279452 TRGC1P0CF51 173 aa4.51□□□□□ -1.69
CD44-204ENST00000279452 IGLC6P0CF74 106 aa4.51□□□□□ -1.69
CD44-204ENST00000279452 FAM74A3Q4VXF1 159 aa4.51□□□□□ -1.69
CD44-204ENST00000279452 TTC32Q5I0X7 151 aa4.51□□□□□ -1.69
CD44-204ENST00000279452 LYPD5Q6UWN5 251 aa4.51□□□□□ -1.69
CD44-204ENST00000279452 Q6ZSN1 163 aa4.51□□□□□ -1.69
CD44-204ENST00000279452 SMIM15Q7Z3B0 74 aa4.51□□□□□ -1.69
CD44-204ENST00000279452 ATP6V0E2Q8NHE4 81 aa4.51□□□□□ -1.69
CD44-204ENST00000279452 PGLYRP4Q96LB8 373 aa4.51□□□□□ -1.69
CD44-204ENST00000279452 SSBP4Q9BWG4 385 aaPredicted RBP4.51□□□□□ -1.69
CD44-204ENST00000279452 NAT8Q9UHE5 227 aa4.51□□□□□ -1.69
CD44-204ENST00000279452 LY96Q9Y6Y9 160 aa4.51□□□□□ -1.69
CD44-204ENST00000279452 STARD9Q9P2P6 4700 aa4.5□□□□□ -1.69
CD44-204ENST00000279452 TRAV8-6A0A0B4J262 113 aa4.5□□□□□ -1.69
CD44-204ENST00000279452 NBDYA0A0U1RRE5 68 aa4.5□□□□□ -1.69
CD44-204ENST00000279452 NDUFS6O75380 124 aaKnown RBP4.5□□□□□ -1.69
CD44-204ENST00000279452 CRYGDP07320 174 aa4.5□□□□□ -1.69
CD44-204ENST00000279452 NTF3P20783 257 aa4.5□□□□□ -1.69
CD44-204ENST00000279452 CTRLP40313 264 aa4.5□□□□□ -1.69
CD44-204ENST00000279452 RAB4BP61018 213 aa4.5□□□□□ -1.69
CD44-204ENST00000279452 RPL23P62829 140 aaKnown RBP4.5□□□□□ -1.69
CD44-204ENST00000279452 RPL36AP83881 106 aaKnown RBP4.5□□□□□ -1.69
CD44-204ENST00000279452 CLLU1Q5K131 121 aa4.5□□□□□ -1.69
CD44-204ENST00000279452 C1orf134Q5TEV5 83 aa4.5□□□□□ -1.69
CD44-204ENST00000279452 FAM231DQ6ZW35 169 aa4.5□□□□□ -1.69
CD44-204ENST00000279452 ZNF575Q86XF7 245 aa4.5□□□□□ -1.69
CD44-204ENST00000279452 WFDC10BQ8IUB3 73 aa4.5□□□□□ -1.69
CD44-204ENST00000279452 SREK1IP1Q8N9Q2 155 aaPredicted RBP4.5□□□□□ -1.69
CD44-204ENST00000279452 RPL36ALQ969Q0 106 aaKnown RBP4.5□□□□□ -1.69
CD44-204ENST00000279452 ISOC2Q96AB3 205 aa4.5□□□□□ -1.69
CD44-204ENST00000279452 UPK3BQ9BT76 320 aa4.5□□□□□ -1.69
CD44-204ENST00000279452 SMDT1Q9H4I9 107 aa4.5□□□□□ -1.69
CD44-204ENST00000279452 MSRB1Q9NZV6 116 aa4.5□□□□□ -1.69
CD44-204ENST00000279452 TENM2Q9NT68 2774 aa4.5□□□□□ -1.69
CD44-204ENST00000279452 IGHV3-38A0A0C4DH36 116 aa4.49□□□□□ -1.69
CD44-204ENST00000279452 H7C1H1 209 aa4.49□□□□□ -1.69
CD44-204ENST00000279452 EVI2AP22794 236 aa4.49□□□□□ -1.69
CD44-204ENST00000279452 UFSP1Q6NVU6 142 aa4.49□□□□□ -1.69
CD44-204ENST00000279452 OR10G8Q8NGN5 311 aa4.49□□□□□ -1.69
CD44-204ENST00000279452 TSKUQ8WUA8 353 aa4.49□□□□□ -1.69
CD44-204ENST00000279452 GTSF1Q8WW33 167 aa4.49□□□□□ -1.69
CD44-204ENST00000279452 GTSF1LQ9H1H1 148 aa4.49□□□□□ -1.69
CD44-204ENST00000279452 DPH3P1Q9H4G8 78 aa4.49□□□□□ -1.69
CD44-204ENST00000279452 OSTCQ9NRP0 149 aa4.49□□□□□ -1.69
CD44-204ENST00000279452 TRAV9-2A0A087WT02 112 aa4.48□□□□□ -1.69
CD44-204ENST00000279452 TRBV10-1A0A0K0K1A3 114 aa4.48□□□□□ -1.69
CD44-204ENST00000279452 PRSS29PA6NIE9 313 aa4.48□□□□□ -1.69
CD44-204ENST00000279452 HIGD1CA8MV81 97 aa4.48□□□□□ -1.69
CD44-204ENST00000279452 IGHV3-30P01768 117 aa4.48□□□□□ -1.69
CD44-204ENST00000279452 IGHV3-33P01772 117 aa4.48□□□□□ -1.69
CD44-204ENST00000279452 IGHV3-30-3P0DP02 117 aa4.48□□□□□ -1.69
CD44-204ENST00000279452 IGHV3-30-5P0DP03 117 aa4.48□□□□□ -1.69
CD44-204ENST00000279452 IFITM2Q01629 132 aa4.48□□□□□ -1.69
CD44-204ENST00000279452 CT83Q5H943 113 aa4.48□□□□□ -1.69
CD44-204ENST00000279452 LELP1Q5T871 98 aa4.48□□□□□ -1.69
CD44-204ENST00000279452 SUMO4Q6EEV6 95 aa4.48□□□□□ -1.69
CD44-204ENST00000279452 KCNIP4Q6PIL6 250 aa4.48□□□□□ -1.69
CD44-204ENST00000279452 Q6ZR54 194 aa4.48□□□□□ -1.69
CD44-204ENST00000279452 COMMD7Q86VX2 200 aa4.48□□□□□ -1.69
CD44-204ENST00000279452 C6orf223Q8N319 242 aa4.48□□□□□ -1.69
CD44-204ENST00000279452 Q9UF83 564 aa4.48□□□□□ -1.69
CD44-204ENST00000279452 NAT8BQ9UHF3 227 aa4.48□□□□□ -1.69
CD44-204ENST00000279452 TNFRSF18Q9Y5U5 241 aa4.48□□□□□ -1.69
CD44-204ENST00000279452 URGCP-MRPS24S4R325 110 aa4.48□□□□□ -1.69
CD44-204ENST00000279452 KMT2CQ8NEZ4 4911 aaKnown RBP4.47□□□□□ -1.69
CD44-204ENST00000279452 TRBV7-3A0A075B6L6 115 aa4.47□□□□□ -1.69
CD44-204ENST00000279452 A0A087WWC5 75 aa4.47□□□□□ -1.69
CD44-204ENST00000279452 TRAV26-2A0A0B4J265 109 aa4.47□□□□□ -1.69
CD44-204ENST00000279452 A0A1B0GUT8 65 aa4.47□□□□□ -1.69
CD44-204ENST00000279452 LORP23490 312 aaPredicted RBP4.47□□□□□ -1.69
CD44-204ENST00000279452 C4orf48Q5BLP8 95 aa4.47□□□□□ -1.69
CD44-204ENST00000279452 NEXN-AS1Q8NBZ9 246 aa4.47□□□□□ -1.69
CD44-204ENST00000279452 KRTAP1-5Q9BYS1 174 aa4.47□□□□□ -1.69
CD44-204ENST00000279452 GFRA4Q9GZZ7 299 aa4.47□□□□□ -1.69
CD44-204ENST00000279452 V9GYV3 84 aa4.47□□□□□ -1.69
CD44-204ENST00000279452 CSMD3Q7Z407 3707 aa4.46□□□□□ -1.69
CD44-204ENST00000279452 TMEM238LA0A1B0GVL6 79 aa4.46□□□□□ -1.7
CD44-204ENST00000279452 TMEM262E9PQX1 116 aa4.46□□□□□ -1.7
CD44-204ENST00000279452 F8W036 122 aa4.46□□□□□ -1.7
CD44-204ENST00000279452 RTL8CO15255 209 aa4.46□□□□□ -1.7
CD44-204ENST00000279452 LINC00694P0DN24 101 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 136.6 ms