RNA–Protein interactions for RNA: ENST00000268099.13

SCAMP2-201, Transcript of secretory carrier membrane protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCAMP2, Length 2,453 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP2-201ENST00000268099 Q6Q795 121 aa11.6□□□□□ -0.55
SCAMP2-201ENST00000268099 IGHV4OR15-8A0A075B7B6 117 aa11.6□□□□□ -0.55
SCAMP2-201ENST00000268099 A0A087WW49 117 aa11.6□□□□□ -0.55
SCAMP2-201ENST00000268099 POLR2KP53803 58 aaKnown RBP11.6□□□□□ -0.55
SCAMP2-201ENST00000268099 ATXN8Q156A1 80 aa11.6□□□□□ -0.55
SCAMP2-201ENST00000268099 LRBAP50851 2863 aa11.59□□□□□ -0.55
SCAMP2-201ENST00000268099 G3V318 75 aa11.59□□□□□ -0.55
SCAMP2-201ENST00000268099 ELANEP08246 267 aa11.59□□□□□ -0.55
SCAMP2-201ENST00000268099 RNASE4P34096 147 aaKnown RBP11.59□□□□□ -0.55
SCAMP2-201ENST00000268099 LINC00315P59091 139 aa11.59□□□□□ -0.55
SCAMP2-201ENST00000268099 LINC01620Q4KN68 170 aa11.59□□□□□ -0.55
SCAMP2-201ENST00000268099 MINOS1Q5TGZ0 78 aa11.59□□□□□ -0.55
SCAMP2-201ENST00000268099 KIF25-AS1Q9Y6Z4 181 aa11.59□□□□□ -0.55
SCAMP2-201ENST00000268099 MINOS1-NBL1R4GNA1 71 aa11.59□□□□□ -0.55
SCAMP2-201ENST00000268099 TRBV7-1A0A0A6YYK4 115 aa11.59□□□□□ -0.55
SCAMP2-201ENST00000268099 TRAV2A0A0B4J234 112 aa11.59□□□□□ -0.55
SCAMP2-201ENST00000268099 DEFB1P60022 68 aa11.59□□□□□ -0.55
SCAMP2-201ENST00000268099 TRAV8-4A0A0B4J246 113 aa11.58□□□□□ -0.56
SCAMP2-201ENST00000268099 VCYO14598 125 aa11.58□□□□□ -0.56
SCAMP2-201ENST00000268099 Q1RN00 199 aa11.58□□□□□ -0.56
SCAMP2-201ENST00000268099 ODF3Q96PU9 254 aa11.58□□□□□ -0.56
SCAMP2-201ENST00000268099 ATMQ13315 3056 aa11.58□□□□□ -0.56
SCAMP2-201ENST00000268099 CACNA1BQ00975 2339 aa11.58□□□□□ -0.56
SCAMP2-201ENST00000268099 BSNQ9UPA5 3926 aa11.58□□□□□ -0.56
SCAMP2-201ENST00000268099 TRBV7-9A0A0J9YWB2 115 aa11.58□□□□□ -0.56
SCAMP2-201ENST00000268099 TEX49A0A1B0GTD5 131 aa11.58□□□□□ -0.56
SCAMP2-201ENST00000268099 OVOL1O14753 267 aa11.58□□□□□ -0.56
SCAMP2-201ENST00000268099 NXPH4O95158 308 aa11.58□□□□□ -0.56
SCAMP2-201ENST00000268099 RPL13AP40429 203 aaKnown RBP11.58□□□□□ -0.56
SCAMP2-201ENST00000268099 SUMO4Q6EEV6 95 aa11.58□□□□□ -0.56
SCAMP2-201ENST00000268099 IGF2-ASQ6U949 168 aa11.58□□□□□ -0.56
SCAMP2-201ENST00000268099 MUSTN1Q8IVN3 82 aa11.58□□□□□ -0.56
SCAMP2-201ENST00000268099 LINC01600Q96MT4 127 aa11.58□□□□□ -0.56
SCAMP2-201ENST00000268099 LEPROTO15243 131 aa11.57□□□□□ -0.56
SCAMP2-201ENST00000268099 IGHV4-39P01824 125 aa11.57□□□□□ -0.56
SCAMP2-201ENST00000268099 C15orf53Q8NAA6 179 aa11.56□□□□□ -0.56
SCAMP2-201ENST00000268099 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.55□□□□□ -0.56
SCAMP2-201ENST00000268099 TMEM223A0PJW6 202 aa11.55□□□□□ -0.56
SCAMP2-201ENST00000268099 LINC01560Q8TB33 94 aa11.55□□□□□ -0.56
SCAMP2-201ENST00000268099 FAM19A4Q96LR4 140 aa11.55□□□□□ -0.56
SCAMP2-201ENST00000268099 FAM110AQ9BQ89 295 aa11.55□□□□□ -0.56
SCAMP2-201ENST00000268099 TRBV10-2A0A0K0K1G8 114 aa11.55□□□□□ -0.56
SCAMP2-201ENST00000268099 SDHAF1A6NFY7 115 aa11.55□□□□□ -0.56
SCAMP2-201ENST00000268099 C1orf122Q6ZSJ8 110 aa11.55□□□□□ -0.56
SCAMP2-201ENST00000268099 JPT2Q9H910 190 aa11.55□□□□□ -0.56
SCAMP2-201ENST00000268099 PTPRZ1P23471 2315 aaPredicted RBP11.55□□□□□ -0.56
SCAMP2-201ENST00000268099 H3BMM0 161 aa11.54□□□□□ -0.56
SCAMP2-201ENST00000268099 CFAP161Q6P656 301 aa11.54□□□□□ -0.56
SCAMP2-201ENST00000268099 FAM159AQ6UWV7 190 aa11.54□□□□□ -0.56
SCAMP2-201ENST00000268099 UBE2WQ96B02 151 aa11.54□□□□□ -0.56
SCAMP2-201ENST00000268099 GVINP1Q7Z2Y8 2422 aa11.54□□□□□ -0.56
SCAMP2-201ENST00000268099 SOCS3O14543 225 aa11.54□□□□□ -0.56
SCAMP2-201ENST00000268099 APRG1Q8IVJ8 170 aa11.54□□□□□ -0.56
SCAMP2-201ENST00000268099 BEX4Q9NWD9 120 aaPredicted RBP11.54□□□□□ -0.56
SCAMP2-201ENST00000268099 TRBV27A0A0K0K1C4 114 aa11.53□□□□□ -0.56
SCAMP2-201ENST00000268099 F5H697 171 aa11.53□□□□□ -0.56
SCAMP2-201ENST00000268099 F6UB75 175 aa11.53□□□□□ -0.56
SCAMP2-201ENST00000268099 IGHV3-64A0A075B6Q5 118 aa11.53□□□□□ -0.56
SCAMP2-201ENST00000268099 A0A087WWL8 130 aa11.53□□□□□ -0.56
SCAMP2-201ENST00000268099 TRBV30A0A0K0K1B3 111 aa11.53□□□□□ -0.56
SCAMP2-201ENST00000268099 SMIM20Q8N5G0 67 aa11.53□□□□□ -0.56
SCAMP2-201ENST00000268099 OPRPNQ99935 248 aaPredicted RBP11.53□□□□□ -0.56
SCAMP2-201ENST00000268099 LGALS9O00182 355 aa11.52□□□□□ -0.56
SCAMP2-201ENST00000268099 TRIAP1O43715 76 aa11.52□□□□□ -0.56
SCAMP2-201ENST00000268099 HERV-K104P63124 156 aa11.52□□□□□ -0.56
SCAMP2-201ENST00000268099 SHISA2Q6UWI4 295 aa11.52□□□□□ -0.56
SCAMP2-201ENST00000268099 M0R2P5 195 aa11.52□□□□□ -0.57
SCAMP2-201ENST00000268099 IGHV1-69P01742 117 aa11.52□□□□□ -0.57
SCAMP2-201ENST00000268099 SVEP1Q4LDE5 3571 aa11.51□□□□□ -0.57
SCAMP2-201ENST00000268099 Q8NA96 180 aa11.51□□□□□ -0.57
SCAMP2-201ENST00000268099 ZNF256Q9Y2P7 627 aaPredicted RBP11.51□□□□□ -0.57
SCAMP2-201ENST00000268099 ANKRD11Q6UB99 2663 aaPredicted RBP11.51□□□□□ -0.57
SCAMP2-201ENST00000268099 A0A0J9YX75 114 aa11.51□□□□□ -0.57
SCAMP2-201ENST00000268099 ZNF22P17026 224 aaPredicted RBP11.51□□□□□ -0.57
SCAMP2-201ENST00000268099 UNQ9165/PRO28630Q6UXU0 137 aa11.51□□□□□ -0.57
SCAMP2-201ENST00000268099 TRBV6-5A0A0K0K1A5 114 aa11.5□□□□□ -0.57
SCAMP2-201ENST00000268099 PRR30Q53SZ7 412 aaPredicted RBP11.5□□□□□ -0.57
SCAMP2-201ENST00000268099 C2orf82Q6UX34 121 aa11.5□□□□□ -0.57
SCAMP2-201ENST00000268099 A0A0J9YXY3 114 aa11.5□□□□□ -0.57
SCAMP2-201ENST00000268099 ZFP36P26651 326 aaKnown RBP11.5□□□□□ -0.57
SCAMP2-201ENST00000268099 SPANXA1Q9NS26 97 aa11.5□□□□□ -0.57
SCAMP2-201ENST00000268099 ACACAQ13085 2346 aa11.5□□□□□ -0.57
SCAMP2-201ENST00000268099 GRNP28799 593 aaKnown RBP11.49□□□□□ -0.57
SCAMP2-201ENST00000268099 NSUN5P1Q3KNT7 163 aa11.49□□□□□ -0.57
SCAMP2-201ENST00000268099 SIRPDQ9H106 197 aa11.49□□□□□ -0.57
SCAMP2-201ENST00000268099 ANKHD1Q8IWZ3 2542 aaKnown RBP11.49□□□□□ -0.57
SCAMP2-201ENST00000268099 RPL11P62913 178 aaKnown RBP11.49□□□□□ -0.57
SCAMP2-201ENST00000268099 H7C423 109 aa11.48□□□□□ -0.57
SCAMP2-201ENST00000268099 MRPL23Q16540 153 aaKnown RBP11.48□□□□□ -0.57
SCAMP2-201ENST00000268099 ZNF580Q9UK33 172 aa11.48□□□□□ -0.57
SCAMP2-201ENST00000268099 SPTBN2O15020 2390 aa11.48□□□□□ -0.57
SCAMP2-201ENST00000268099 RHOHQ15669 191 aa11.48□□□□□ -0.57
SCAMP2-201ENST00000268099 FAM74A4Q5TZK3 123 aa11.48□□□□□ -0.57
SCAMP2-201ENST00000268099 MDFICQ9P1T7 246 aa11.48□□□□□ -0.57
SCAMP2-201ENST00000268099 A0A0J9YXV3 536 aa11.47□□□□□ -0.57
SCAMP2-201ENST00000268099 FOXC1Q12948 553 aa11.47□□□□□ -0.57
SCAMP2-201ENST00000268099 ICOSQ9Y6W8 199 aa11.47□□□□□ -0.57
SCAMP2-201ENST00000268099 AKAP13Q12802 2813 aa11.47□□□□□ -0.57
SCAMP2-201ENST00000268099 FAM223BA6NKX1 122 aa11.47□□□□□ -0.57
SCAMP2-201ENST00000268099 TRBV12-3P01733 135 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 80.2 ms