RNA–Protein interactions for RNA: ENST00000262554.6

SPTLC1-201, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC1, Length 1,894 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-201ENST00000262554 ANKRD39Q53RE8 183 aa9.55□□□□□ -0.88
SPTLC1-201ENST00000262554 SUMO4Q6EEV6 95 aa9.55□□□□□ -0.88
SPTLC1-201ENST00000262554 LINC00469Q8N7U9 141 aa9.55□□□□□ -0.88
SPTLC1-201ENST00000262554 STPG4Q8N801 248 aa9.55□□□□□ -0.88
SPTLC1-201ENST00000262554 C11orf44Q8N8P7 122 aa9.55□□□□□ -0.88
SPTLC1-201ENST00000262554 C16orf95Q9H693 158 aa9.55□□□□□ -0.88
SPTLC1-201ENST00000262554 MAP6D1Q9H9H5 199 aa9.55□□□□□ -0.88
SPTLC1-201ENST00000262554 CBY3A6NI87 242 aa9.55□□□□□ -0.88
SPTLC1-201ENST00000262554 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.55□□□□□ -0.88
SPTLC1-201ENST00000262554 CCL24O00175 119 aa9.55□□□□□ -0.88
SPTLC1-201ENST00000262554 RPL32P62910 135 aaKnown RBP9.55□□□□□ -0.88
SPTLC1-201ENST00000262554 FHL3Q13643 280 aa9.55□□□□□ -0.88
SPTLC1-201ENST00000262554 CD300EQ496F6 205 aaPredicted RBP9.55□□□□□ -0.88
SPTLC1-201ENST00000262554 SPAG8Q99932 426 aaPredicted RBP9.55□□□□□ -0.88
SPTLC1-201ENST00000262554 CSTL1Q9H114 145 aa9.55□□□□□ -0.88
SPTLC1-201ENST00000262554 ZMAT4Q9H898 229 aa9.55□□□□□ -0.88
SPTLC1-201ENST00000262554 SORL1Q92673 2214 aa9.54□□□□□ -0.88
SPTLC1-201ENST00000262554 TRAV25A0A0B4J276 109 aa9.54□□□□□ -0.88
SPTLC1-201ENST00000262554 FAM74A4Q5TZK3 123 aa9.54□□□□□ -0.88
SPTLC1-201ENST00000262554 ZNF418Q8TF45 676 aaPredicted RBP9.54□□□□□ -0.88
SPTLC1-201ENST00000262554 TOMM6Q96B49 74 aa9.54□□□□□ -0.88
SPTLC1-201ENST00000262554 TSSC4Q9Y5U2 329 aaPredicted RBP9.54□□□□□ -0.88
SPTLC1-201ENST00000262554 CCDC168Q8NDH2 2452 aa9.54□□□□□ -0.88
SPTLC1-201ENST00000262554 DPM2O94777 84 aa9.53□□□□□ -0.88
SPTLC1-201ENST00000262554 IGKCP01834 107 aa9.53□□□□□ -0.88
SPTLC1-201ENST00000262554 LINC01006Q8NI28 216 aa9.53□□□□□ -0.88
SPTLC1-201ENST00000262554 MYO9AB2RTY4 2548 aa9.53□□□□□ -0.88
SPTLC1-201ENST00000262554 SONP18583 2426 aaKnown RBP9.53□□□□□ -0.88
SPTLC1-201ENST00000262554 G0S2P27469 103 aa9.53□□□□□ -0.88
SPTLC1-201ENST00000262554 ZNF124Q15973 351 aa9.53□□□□□ -0.88
SPTLC1-201ENST00000262554 SCGB3A1Q96QR1 104 aa9.53□□□□□ -0.88
SPTLC1-201ENST00000262554 CITED2Q99967 270 aaPredicted RBP9.53□□□□□ -0.88
SPTLC1-201ENST00000262554 ZNF469Q96JG9 3925 aaPredicted RBP9.52□□□□□ -0.88
SPTLC1-201ENST00000262554 A0A087WX48 190 aa9.52□□□□□ -0.89
SPTLC1-201ENST00000262554 RBMY1BA6NDE4 496 aaKnown RBP9.52□□□□□ -0.89
SPTLC1-201ENST00000262554 RBMY1EA6NEQ0 496 aaKnown RBP9.52□□□□□ -0.89
SPTLC1-201ENST00000262554 RBMY1DP0C7P1 496 aaKnown RBP9.52□□□□□ -0.89
SPTLC1-201ENST00000262554 RBMY1A1P0DJD3 496 aaKnown RBP9.52□□□□□ -0.89
SPTLC1-201ENST00000262554 RBMY1CP0DJD4 496 aa9.52□□□□□ -0.89
SPTLC1-201ENST00000262554 RBMY1FQ15415 496 aaKnown RBP9.52□□□□□ -0.89
SPTLC1-201ENST00000262554 ZNF56Q15929 161 aa9.52□□□□□ -0.89
SPTLC1-201ENST00000262554 ZNF876PQ49A33 203 aa9.52□□□□□ -0.89
SPTLC1-201ENST00000262554 MPV17L2Q567V2 206 aa9.52□□□□□ -0.89
SPTLC1-201ENST00000262554 C12orf54Q6X4T0 127 aa9.52□□□□□ -0.89
SPTLC1-201ENST00000262554 TMEM160Q9NX00 188 aa9.52□□□□□ -0.89
SPTLC1-201ENST00000262554 ZNF256Q9Y2P7 627 aaPredicted RBP9.52□□□□□ -0.89
SPTLC1-201ENST00000262554 VCYO14598 125 aa9.51□□□□□ -0.89
SPTLC1-201ENST00000262554 CRYGDP07320 174 aa9.51□□□□□ -0.89
SPTLC1-201ENST00000262554 FGF6P10767 208 aa9.51□□□□□ -0.89
SPTLC1-201ENST00000262554 HTN1P15515 57 aa9.51□□□□□ -0.89
SPTLC1-201ENST00000262554 C2orf66Q6UXQ4 117 aa9.51□□□□□ -0.89
SPTLC1-201ENST00000262554 NBPF19A0A087WUL8 3843 aa9.51□□□□□ -0.89
SPTLC1-201ENST00000262554 TRAV12-1A0A0B4J245 112 aa9.51□□□□□ -0.89
SPTLC1-201ENST00000262554 ZNF25P17030 456 aaPredicted RBP9.51□□□□□ -0.89
SPTLC1-201ENST00000262554 PLNP26678 52 aa9.51□□□□□ -0.89
SPTLC1-201ENST00000262554 NMUP48645 174 aa9.51□□□□□ -0.89
SPTLC1-201ENST00000262554 POLR2KP53803 58 aaKnown RBP9.51□□□□□ -0.89
SPTLC1-201ENST00000262554 TCTAP57738 103 aa9.51□□□□□ -0.89
SPTLC1-201ENST00000262554 HILS1P60008 231 aa9.51□□□□□ -0.89
SPTLC1-201ENST00000262554 BOD1L2Q8IYS8 172 aa9.51□□□□□ -0.89
SPTLC1-201ENST00000262554 KIR2DL4Q99706 377 aa9.51□□□□□ -0.89
SPTLC1-201ENST00000262554 HHLA3Q9XRX5 114 aa9.51□□□□□ -0.89
SPTLC1-201ENST00000262554 TRBV6-5A0A0K0K1A5 114 aa9.5□□□□□ -0.89
SPTLC1-201ENST00000262554 LINC01549A6NIU2 74 aa9.5□□□□□ -0.89
SPTLC1-201ENST00000262554 DLEU1O43261 78 aa9.5□□□□□ -0.89
SPTLC1-201ENST00000262554 C2orf91Q6ZV80 131 aa9.5□□□□□ -0.89
SPTLC1-201ENST00000262554 NEGR1Q7Z3B1 354 aa9.5□□□□□ -0.89
SPTLC1-201ENST00000262554 CLUHP3Q96NS8 147 aa9.5□□□□□ -0.89
SPTLC1-201ENST00000262554 MRPL35Q9NZE8 188 aaKnown RBP9.5□□□□□ -0.89
SPTLC1-201ENST00000262554 H7C1H1 209 aa9.49□□□□□ -0.89
SPTLC1-201ENST00000262554 BVES-AS1Q5T3Y7 98 aa9.49□□□□□ -0.89
SPTLC1-201ENST00000262554 TRPT1Q86TN4 253 aaKnown RBP9.49□□□□□ -0.89
SPTLC1-201ENST00000262554 SDHAF1A6NFY7 115 aa9.49□□□□□ -0.89
SPTLC1-201ENST00000262554 M0QY20 66 aa9.49□□□□□ -0.89
SPTLC1-201ENST00000262554 SIVA1O15304 175 aa9.49□□□□□ -0.89
SPTLC1-201ENST00000262554 INSP01308 110 aa9.49□□□□□ -0.89
SPTLC1-201ENST00000262554 ZNF415Q09FC8 603 aa9.49□□□□□ -0.89
SPTLC1-201ENST00000262554 ERASQ7Z444 233 aa9.49□□□□□ -0.89
SPTLC1-201ENST00000262554 CYSLTR1Q9Y271 337 aa9.49□□□□□ -0.89
SPTLC1-201ENST00000262554 TRBV27A0A0K0K1C4 114 aa9.48□□□□□ -0.89
SPTLC1-201ENST00000262554 F8VRH5 84 aa9.48□□□□□ -0.89
SPTLC1-201ENST00000262554 ODF3L2Q3SX64 289 aa9.48□□□□□ -0.89
SPTLC1-201ENST00000262554 ZC2HC1BQ5TFG8 222 aa9.48□□□□□ -0.89
SPTLC1-201ENST00000262554 ZFP2Q6ZN57 461 aa9.48□□□□□ -0.89
SPTLC1-201ENST00000262554 LINC01587Q99440 93 aa9.48□□□□□ -0.89
SPTLC1-201ENST00000262554 LINC00467Q9BRT7 94 aa9.48□□□□□ -0.89
SPTLC1-201ENST00000262554 HELZ2Q9BYK8 2649 aaKnown RBP9.48□□□□□ -0.89
SPTLC1-201ENST00000262554 OR11H12B2RN74 326 aa9.47□□□□□ -0.89
SPTLC1-201ENST00000262554 M0R2P5 195 aa9.47□□□□□ -0.89
SPTLC1-201ENST00000262554 NDUFA7O95182 113 aa9.47□□□□□ -0.89
SPTLC1-201ENST00000262554 STHQ8IWL8 128 aa9.47□□□□□ -0.89
SPTLC1-201ENST00000262554 NEXN-AS1Q8NBZ9 246 aa9.47□□□□□ -0.89
SPTLC1-201ENST00000262554 JMJD8Q96S16 334 aa9.47□□□□□ -0.89
SPTLC1-201ENST00000262554 TMEM208Q9BTX3 173 aa9.47□□□□□ -0.89
SPTLC1-201ENST00000262554 CHTOPQ9Y3Y2 248 aaKnown RBP9.47□□□□□ -0.89
SPTLC1-201ENST00000262554 PIK3CD-AS1Q5SR53 167 aa9.47□□□□□ -0.89
SPTLC1-201ENST00000262554 MORN3Q6PF18 240 aaPredicted RBP9.47□□□□□ -0.89
SPTLC1-201ENST00000262554 GTSCR1Q86UQ5 136 aa9.47□□□□□ -0.89
SPTLC1-201ENST00000262554 PCP2Q8IVA1 136 aa9.47□□□□□ -0.89
SPTLC1-201ENST00000262554 BAALCQ8WXS3 180 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 88.6 ms