RNA–Protein interactions for RNA: ENST00000262395.9

TRAF4-201, Transcript of TNF receptor associated factor 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF4, Length 2,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-201ENST00000262395 MOB4Q9Y3A3 225 aa13.49□□□□□ -0.25
TRAF4-201ENST00000262395 RHPN1-AS1Q9BWJ2 59 aa13.49□□□□□ -0.25
TRAF4-201ENST00000262395 TRAV12-3A0A0B4J271 114 aa13.48□□□□□ -0.25
TRAF4-201ENST00000262395 A6NJY4 79 aa13.48□□□□□ -0.25
TRAF4-201ENST00000262395 XGP55808 180 aa13.48□□□□□ -0.25
TRAF4-201ENST00000262395 SUMO4Q6EEV6 95 aa13.48□□□□□ -0.25
TRAF4-201ENST00000262395 UBE2D1P51668 147 aa13.48□□□□□ -0.25
TRAF4-201ENST00000262395 FHL3Q13643 280 aa13.48□□□□□ -0.25
TRAF4-201ENST00000262395 A0A0J9YY99 117 aa13.47□□□□□ -0.25
TRAF4-201ENST00000262395 FAM223BA6NKX1 122 aa13.47□□□□□ -0.25
TRAF4-201ENST00000262395 LINC01619G3V211 115 aa13.47□□□□□ -0.25
TRAF4-201ENST00000262395 CD7P09564 240 aa13.47□□□□□ -0.25
TRAF4-201ENST00000262395 LINC00315P59091 139 aa13.47□□□□□ -0.25
TRAF4-201ENST00000262395 FAM223AQ8IWN6 122 aa13.47□□□□□ -0.25
TRAF4-201ENST00000262395 C1QTNF4Q9BXJ3 329 aa13.47□□□□□ -0.25
TRAF4-201ENST00000262395 BLCAPP62952 87 aa13.46□□□□□ -0.25
TRAF4-201ENST00000262395 ZNRF2Q8NHG8 242 aa13.46□□□□□ -0.25
TRAF4-201ENST00000262395 CELSR2Q9HCU4 2923 aa13.46□□□□□ -0.25
TRAF4-201ENST00000262395 H7C2G1 150 aa13.46□□□□□ -0.25
TRAF4-201ENST00000262395 NDUFA4O00483 81 aa13.46□□□□□ -0.25
TRAF4-201ENST00000262395 FAM159AQ6UWV7 190 aa13.46□□□□□ -0.25
TRAF4-201ENST00000262395 NDUFA11Q86Y39 141 aa13.46□□□□□ -0.25
TRAF4-201ENST00000262395 KIF25-AS1Q9Y6Z4 181 aa13.46□□□□□ -0.25
TRAF4-201ENST00000262395 CSPG4Q6UVK1 2322 aa13.46□□□□□ -0.25
TRAF4-201ENST00000262395 IGIPA6NJ69 53 aa13.46□□□□□ -0.26
TRAF4-201ENST00000262395 TCL1BO95988 128 aa13.46□□□□□ -0.26
TRAF4-201ENST00000262395 Q6ZUT4 128 aa13.46□□□□□ -0.26
TRAF4-201ENST00000262395 TRAV12-2A0A075B6T6 113 aa13.45□□□□□ -0.26
TRAF4-201ENST00000262395 SDHAF1A6NFY7 115 aa13.45□□□□□ -0.26
TRAF4-201ENST00000262395 RAX2Q96IS3 184 aa13.45□□□□□ -0.26
TRAF4-201ENST00000262395 DOPEY2Q9Y3R5 2298 aa13.45□□□□□ -0.26
TRAF4-201ENST00000262395 PMVKQ15126 192 aa13.45□□□□□ -0.26
TRAF4-201ENST00000262395 C19orf54Q5BKX5 351 aa13.45□□□□□ -0.26
TRAF4-201ENST00000262395 CFC1BP0CG36 223 aa13.44□□□□□ -0.26
TRAF4-201ENST00000262395 CFC1P0CG37 223 aa13.44□□□□□ -0.26
TRAF4-201ENST00000262395 SCGB1C2P0DMR2 95 aa13.44□□□□□ -0.26
TRAF4-201ENST00000262395 SPTBN4Q9H254 2564 aa13.44□□□□□ -0.26
TRAF4-201ENST00000262395 HERVK_113P61574 105 aa13.44□□□□□ -0.26
TRAF4-201ENST00000262395 FAM19A4Q96LR4 140 aa13.44□□□□□ -0.26
TRAF4-201ENST00000262395 KIR2DL4Q99706 377 aa13.44□□□□□ -0.26
TRAF4-201ENST00000262395 CARD19Q96LW7 228 aa13.43□□□□□ -0.26
TRAF4-201ENST00000262395 IGHV4-38-2P0DP08 117 aa13.43□□□□□ -0.26
TRAF4-201ENST00000262395 ANAPC13Q9BS18 74 aa13.43□□□□□ -0.26
TRAF4-201ENST00000262395 POLR2KP53803 58 aaKnown RBP13.43□□□□□ -0.26
TRAF4-201ENST00000262395 KLRB1Q12918 225 aa13.43□□□□□ -0.26
TRAF4-201ENST00000262395 CREBBPQ92793 2442 aa13.43□□□□□ -0.26
TRAF4-201ENST00000262395 H3BUX3 64 aa13.42□□□□□ -0.26
TRAF4-201ENST00000262395 UBE2D3P61077 147 aa13.42□□□□□ -0.26
TRAF4-201ENST00000262395 UBE2D2P62837 147 aa13.42□□□□□ -0.26
TRAF4-201ENST00000262395 TMEM95Q3KNT9 176 aa13.42□□□□□ -0.26
TRAF4-201ENST00000262395 MDFICQ9P1T7 246 aa13.42□□□□□ -0.26
TRAF4-201ENST00000262395 IGHV3-30P01768 117 aa13.41□□□□□ -0.26
TRAF4-201ENST00000262395 IGHV3-30-5P0DP03 117 aa13.41□□□□□ -0.26
TRAF4-201ENST00000262395 ZNF56Q15929 161 aa13.41□□□□□ -0.26
TRAF4-201ENST00000262395 VCYO14598 125 aa13.41□□□□□ -0.26
TRAF4-201ENST00000262395 IGHV1-69DA0A0B4J2H0 117 aa13.4□□□□□ -0.26
TRAF4-201ENST00000262395 PPP1R17O96001 155 aa13.4□□□□□ -0.26
TRAF4-201ENST00000262395 IGHV1-69P01742 117 aa13.4□□□□□ -0.26
TRAF4-201ENST00000262395 ZNF688P0C7X2 276 aa13.4□□□□□ -0.26
TRAF4-201ENST00000262395 ZNF580Q9UK33 172 aa13.4□□□□□ -0.26
TRAF4-201ENST00000262395 J3QQQ9 107 aa13.4□□□□□ -0.26
TRAF4-201ENST00000262395 NBL1P41271 181 aa13.4□□□□□ -0.26
TRAF4-201ENST00000262395 B5MCH6 92 aa13.4□□□□□ -0.27
TRAF4-201ENST00000262395 ERG28Q9UKR5 140 aa13.4□□□□□ -0.27
TRAF4-201ENST00000262395 LGALS3P17931 250 aaKnown RBP13.39□□□□□ -0.27
TRAF4-201ENST00000262395 TRAV2A0A0B4J234 112 aa13.39□□□□□ -0.27
TRAF4-201ENST00000262395 MED14OSP0DP75 135 aa13.39□□□□□ -0.27
TRAF4-201ENST00000262395 IGHV4OR15-8A0A075B7B6 117 aa13.38□□□□□ -0.27
TRAF4-201ENST00000262395 A0A087WW49 117 aa13.38□□□□□ -0.27
TRAF4-201ENST00000262395 C19orf84I3L1E1 186 aa13.38□□□□□ -0.27
TRAF4-201ENST00000262395 CRIP2P52943 208 aaPredicted RBP13.38□□□□□ -0.27
TRAF4-201ENST00000262395 TRPT1Q86TN4 253 aaKnown RBP13.38□□□□□ -0.27
TRAF4-201ENST00000262395 SLC25A29Q8N8R3 303 aa13.38□□□□□ -0.27
TRAF4-201ENST00000262395 ADARB2-AS1A8MUL3 147 aa13.38□□□□□ -0.27
TRAF4-201ENST00000262395 DAZ1Q9NQZ3 744 aaKnown RBP13.38□□□□□ -0.27
TRAF4-201ENST00000262395 A4D1N5 150 aa13.37□□□□□ -0.27
TRAF4-201ENST00000262395 KLLNB2CW77 178 aa13.37□□□□□ -0.27
TRAF4-201ENST00000262395 LY6DQ14210 128 aa13.37□□□□□ -0.27
TRAF4-201ENST00000262395 IGHV4-39P01824 125 aa13.37□□□□□ -0.27
TRAF4-201ENST00000262395 APRG1Q8IVJ8 170 aa13.37□□□□□ -0.27
TRAF4-201ENST00000262395 C10orf126Q8N4M7 172 aa13.37□□□□□ -0.27
TRAF4-201ENST00000262395 AMELXQ99217 191 aa13.37□□□□□ -0.27
TRAF4-201ENST00000262395 PRO1854Q9UHT4 67 aa13.37□□□□□ -0.27
TRAF4-201ENST00000262395 CUBNO60494 3623 aa13.37□□□□□ -0.27
TRAF4-201ENST00000262395 IGHV4-61A0A0C4DH41 118 aa13.36□□□□□ -0.27
TRAF4-201ENST00000262395 EIF4EBP3O60516 100 aaPredicted RBP13.36□□□□□ -0.27
TRAF4-201ENST00000262395 NXPH4O95158 308 aa13.36□□□□□ -0.27
TRAF4-201ENST00000262395 HTN1P15515 57 aa13.36□□□□□ -0.27
TRAF4-201ENST00000262395 ZNF876PQ49A33 203 aa13.36□□□□□ -0.27
TRAF4-201ENST00000262395 C10orf99Q6UWK7 81 aa13.36□□□□□ -0.27
TRAF4-201ENST00000262395 ANKRD29Q8N6D5 301 aa13.36□□□□□ -0.27
TRAF4-201ENST00000262395 PAPPA-AS1Q5QFB9 102 aa13.36□□□□□ -0.27
TRAF4-201ENST00000262395 TEN1Q86WV5 123 aa13.36□□□□□ -0.27
TRAF4-201ENST00000262395 POM121L12Q8N7R1 296 aa13.36□□□□□ -0.27
TRAF4-201ENST00000262395 TMEM141Q96I45 108 aa13.36□□□□□ -0.27
TRAF4-201ENST00000262395 IGHV3-73A0A0B4J1V6 119 aa13.35□□□□□ -0.27
TRAF4-201ENST00000262395 A8MWV9 139 aa13.35□□□□□ -0.27
TRAF4-201ENST00000262395 ATP6V0E2Q8NHE4 81 aa13.35□□□□□ -0.27
TRAF4-201ENST00000262395 PPDPFLQ8WWR9 84 aa13.35□□□□□ -0.27
TRAF4-201ENST00000262395 BEX4Q9NWD9 120 aaPredicted RBP13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms