RNA–Protein interactions for RNA: ENST00000262213.6

TRAM1-201, Transcript of translocation associated membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAM1, Length 2,785 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1-201ENST00000262213 NDUFA11Q86Y39 141 aa13.1□□□□□ -0.31
TRAM1-201ENST00000262213 Q5PR19 223 aa13.09□□□□□ -0.31
TRAM1-201ENST00000262213 H7C2G1 150 aa13.09□□□□□ -0.31
TRAM1-201ENST00000262213 TCL1BO95988 128 aa13.09□□□□□ -0.31
TRAM1-201ENST00000262213 LINC00315P59091 139 aa13.09□□□□□ -0.31
TRAM1-201ENST00000262213 KIR2DL4Q99706 377 aa13.09□□□□□ -0.31
TRAM1-201ENST00000262213 SPG11Q96JI7 2443 aa13.09□□□□□ -0.31
TRAM1-201ENST00000262213 SDHAF1A6NFY7 115 aa13.09□□□□□ -0.31
TRAM1-201ENST00000262213 IGIPA6NJ69 53 aa13.09□□□□□ -0.31
TRAM1-201ENST00000262213 FHL3Q13643 280 aa13.09□□□□□ -0.31
TRAM1-201ENST00000262213 PPP1R17O96001 155 aa13.08□□□□□ -0.32
TRAM1-201ENST00000262213 ZNRF2Q8NHG8 242 aa13.08□□□□□ -0.32
TRAM1-201ENST00000262213 KIF25-AS1Q9Y6Z4 181 aa13.08□□□□□ -0.32
TRAM1-201ENST00000262213 MT-ATP8P03928 68 aa13.08□□□□□ -0.32
TRAM1-201ENST00000262213 RAX2Q96IS3 184 aa13.08□□□□□ -0.32
TRAM1-201ENST00000262213 CDIP1Q9H305 208 aa13.08□□□□□ -0.32
TRAM1-201ENST00000262213 CFC1BP0CG36 223 aa13.07□□□□□ -0.32
TRAM1-201ENST00000262213 CFC1P0CG37 223 aa13.07□□□□□ -0.32
TRAM1-201ENST00000262213 C19orf54Q5BKX5 351 aa13.07□□□□□ -0.32
TRAM1-201ENST00000262213 FAM19A4Q96LR4 140 aa13.07□□□□□ -0.32
TRAM1-201ENST00000262213 SPINK8P0C7L1 97 aa13.07□□□□□ -0.32
TRAM1-201ENST00000262213 VPS13CQ709C8 3753 aa13.06□□□□□ -0.32
TRAM1-201ENST00000262213 TRAV12-2A0A075B6T6 113 aa13.06□□□□□ -0.32
TRAM1-201ENST00000262213 BLCAPP62952 87 aa13.06□□□□□ -0.32
TRAM1-201ENST00000262213 KLRB1Q12918 225 aa13.06□□□□□ -0.32
TRAM1-201ENST00000262213 VCYO14598 125 aa13.06□□□□□ -0.32
TRAM1-201ENST00000262213 POLR2KP53803 58 aaKnown RBP13.06□□□□□ -0.32
TRAM1-201ENST00000262213 UBE2D3P61077 147 aa13.06□□□□□ -0.32
TRAM1-201ENST00000262213 UBE2D2P62837 147 aa13.06□□□□□ -0.32
TRAM1-201ENST00000262213 ZNF56Q15929 161 aa13.06□□□□□ -0.32
TRAM1-201ENST00000262213 CARD19Q96LW7 228 aa13.06□□□□□ -0.32
TRAM1-201ENST00000262213 IGHV3-30P01768 117 aa13.05□□□□□ -0.32
TRAM1-201ENST00000262213 IGHV3-30-5P0DP03 117 aa13.05□□□□□ -0.32
TRAM1-201ENST00000262213 MED14OSP0DP75 135 aa13.05□□□□□ -0.32
TRAM1-201ENST00000262213 LGALS3P17931 250 aaKnown RBP13.05□□□□□ -0.32
TRAM1-201ENST00000262213 CSPG4Q6UVK1 2322 aa13.05□□□□□ -0.32
TRAM1-201ENST00000262213 IGHV1-69DA0A0B4J2H0 117 aa13.04□□□□□ -0.32
TRAM1-201ENST00000262213 H3BUX3 64 aa13.04□□□□□ -0.32
TRAM1-201ENST00000262213 NCOR2Q9Y618 2525 aa13.04□□□□□ -0.32
TRAM1-201ENST00000262213 DOPEY2Q9Y3R5 2298 aa13.04□□□□□ -0.32
TRAM1-201ENST00000262213 J3QQQ9 107 aa13.04□□□□□ -0.32
TRAM1-201ENST00000262213 IGHV4-38-2P0DP08 117 aa13.04□□□□□ -0.32
TRAM1-201ENST00000262213 PAPPA-AS1Q5QFB9 102 aa13.04□□□□□ -0.32
TRAM1-201ENST00000262213 IGHV1-69P01742 117 aa13.03□□□□□ -0.32
TRAM1-201ENST00000262213 UCNP55089 124 aa13.03□□□□□ -0.32
TRAM1-201ENST00000262213 XGP55808 180 aa13.03□□□□□ -0.32
TRAM1-201ENST00000262213 CLUHP3Q96NS8 147 aa13.03□□□□□ -0.32
TRAM1-201ENST00000262213 MDFICQ9P1T7 246 aa13.03□□□□□ -0.32
TRAM1-201ENST00000262213 IGHV4OR15-8A0A075B7B6 117 aa13.03□□□□□ -0.32
TRAM1-201ENST00000262213 A0A087WW49 117 aa13.03□□□□□ -0.32
TRAM1-201ENST00000262213 TRAV2A0A0B4J234 112 aa13.03□□□□□ -0.32
TRAM1-201ENST00000262213 ZNF688P0C7X2 276 aa13.03□□□□□ -0.32
TRAM1-201ENST00000262213 SLC25A29Q8N8R3 303 aa13.03□□□□□ -0.32
TRAM1-201ENST00000262213 ATP6V0E2Q8NHE4 81 aa13.03□□□□□ -0.32
TRAM1-201ENST00000262213 LYRM7Q5U5X0 104 aa13.02□□□□□ -0.32
TRAM1-201ENST00000262213 PPDPFLQ8WWR9 84 aa13.02□□□□□ -0.32
TRAM1-201ENST00000262213 TMEM141Q96I45 108 aa13.02□□□□□ -0.32
TRAM1-201ENST00000262213 A8MWV9 139 aa13.02□□□□□ -0.33
TRAM1-201ENST00000262213 TMEM95Q3KNT9 176 aa13.02□□□□□ -0.33
TRAM1-201ENST00000262213 TEN1Q86WV5 123 aa13.02□□□□□ -0.33
TRAM1-201ENST00000262213 C10orf126Q8N4M7 172 aa13.02□□□□□ -0.33
TRAM1-201ENST00000262213 GEMIN7Q9H840 131 aaKnown RBP13.02□□□□□ -0.33
TRAM1-201ENST00000262213 DAZ1Q9NQZ3 744 aaKnown RBP13.02□□□□□ -0.33
TRAM1-201ENST00000262213 PRO1854Q9UHT4 67 aa13.02□□□□□ -0.33
TRAM1-201ENST00000262213 A4D1N5 150 aa13.01□□□□□ -0.33
TRAM1-201ENST00000262213 NXPH4O95158 308 aa13.01□□□□□ -0.33
TRAM1-201ENST00000262213 APRG1Q8IVJ8 170 aa13.01□□□□□ -0.33
TRAM1-201ENST00000262213 ANKRD29Q8N6D5 301 aa13.01□□□□□ -0.33
TRAM1-201ENST00000262213 CHD8Q9HCK8 2581 aa13.01□□□□□ -0.33
TRAM1-201ENST00000262213 KLLNB2CW77 178 aa13.01□□□□□ -0.33
TRAM1-201ENST00000262213 ZNF876PQ49A33 203 aa13.01□□□□□ -0.33
TRAM1-201ENST00000262213 Q6ZUT4 128 aa13.01□□□□□ -0.33
TRAM1-201ENST00000262213 TRPT1Q86TN4 253 aaKnown RBP13.01□□□□□ -0.33
TRAM1-201ENST00000262213 CREBBPQ92793 2442 aa13□□□□□ -0.33
TRAM1-201ENST00000262213 POM121L12Q8N7R1 296 aa13□□□□□ -0.33
TRAM1-201ENST00000262213 TIMM17AQ99595 171 aa13□□□□□ -0.33
TRAM1-201ENST00000262213 ZNF580Q9UK33 172 aa13□□□□□ -0.33
TRAM1-201ENST00000262213 TRAV26-1A0A087WT03 109 aa13□□□□□ -0.33
TRAM1-201ENST00000262213 CRYBA4P53673 196 aa13□□□□□ -0.33
TRAM1-201ENST00000262213 USMG5Q96IX5 58 aa13□□□□□ -0.33
TRAM1-201ENST00000262213 CRIP2P52943 208 aaPredicted RBP12.99□□□□□ -0.33
TRAM1-201ENST00000262213 AMELXQ99217 191 aa12.99□□□□□ -0.33
TRAM1-201ENST00000262213 ADARB2-AS1A8MUL3 147 aa12.99□□□□□ -0.33
TRAM1-201ENST00000262213 TCTEX1D4Q5JR98 221 aa12.99□□□□□ -0.33
TRAM1-201ENST00000262213 C9JAW5 83 aa12.98□□□□□ -0.33
TRAM1-201ENST00000262213 IGHV4-39P01824 125 aa12.98□□□□□ -0.33
TRAM1-201ENST00000262213 Q1RN00 199 aa12.98□□□□□ -0.33
TRAM1-201ENST00000262213 BEX4Q9NWD9 120 aaPredicted RBP12.98□□□□□ -0.33
TRAM1-201ENST00000262213 C19orf84I3L1E1 186 aa12.98□□□□□ -0.33
TRAM1-201ENST00000262213 HTN1P15515 57 aa12.98□□□□□ -0.33
TRAM1-201ENST00000262213 ID1P41134 155 aa12.98□□□□□ -0.33
TRAM1-201ENST00000262213 IGHV4-61A0A0C4DH41 118 aa12.98□□□□□ -0.33
TRAM1-201ENST00000262213 A0A0J9YXV3 536 aa12.98□□□□□ -0.33
TRAM1-201ENST00000262213 SPTBN4Q9H254 2564 aa12.97□□□□□ -0.33
TRAM1-201ENST00000262213 TRBV20-1A0A075B6N2 111 aa12.97□□□□□ -0.33
TRAM1-201ENST00000262213 TRBV27A0A0K0K1C4 114 aa12.97□□□□□ -0.33
TRAM1-201ENST00000262213 EIF4EBP3O60516 100 aaPredicted RBP12.97□□□□□ -0.33
TRAM1-201ENST00000262213 IGHG2P01859 326 aa12.97□□□□□ -0.33
TRAM1-201ENST00000262213 SPINK13Q1W4C9 94 aa12.97□□□□□ -0.33
TRAM1-201ENST00000262213 MUSTN1Q8IVN3 82 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms