RNA–Protein interactions for RNA: ENST00000261811.5

CYSTM1-201, Transcript of cysteine rich transmembrane module containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CYSTM1, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYSTM1-201ENST00000261811 K7EQD1 137 aa13.03□□□□□ -0.32
CYSTM1-201ENST00000261811 SSTP61278 116 aa13.03□□□□□ -0.32
CYSTM1-201ENST00000261811 ADIRFQ15847 76 aa13.03□□□□□ -0.32
CYSTM1-201ENST00000261811 WDR73Q6P4I2 378 aa13.03□□□□□ -0.32
CYSTM1-201ENST00000261811 BORCS7Q96B45 105 aa13.03□□□□□ -0.32
CYSTM1-201ENST00000261811 JPT2Q9H910 190 aa13.03□□□□□ -0.32
CYSTM1-201ENST00000261811 A0A087WWL8 130 aa13.02□□□□□ -0.33
CYSTM1-201ENST00000261811 TRGC1P0CF51 173 aa13.02□□□□□ -0.33
CYSTM1-201ENST00000261811 LYZL1Q6UWQ5 148 aa13.02□□□□□ -0.33
CYSTM1-201ENST00000261811 MUC21A0A0G2JKD1 596 aa13.01□□□□□ -0.33
CYSTM1-201ENST00000261811 MUC21A0A140T8X8 626 aa13.01□□□□□ -0.33
CYSTM1-201ENST00000261811 RPL23P62829 140 aaKnown RBP13.01□□□□□ -0.33
CYSTM1-201ENST00000261811 ISOC2Q96AB3 205 aa13.01□□□□□ -0.33
CYSTM1-201ENST00000261811 LYSTQ99698 3801 aa13.01□□□□□ -0.33
CYSTM1-201ENST00000261811 SAMD10Q9BYL1 202 aa13.01□□□□□ -0.33
CYSTM1-201ENST00000261811 CRYGDP07320 174 aa13□□□□□ -0.33
CYSTM1-201ENST00000261811 CTRLP40313 264 aa13□□□□□ -0.33
CYSTM1-201ENST00000261811 RAB4BP61018 213 aa13□□□□□ -0.33
CYSTM1-201ENST00000261811 ZNF56Q15929 161 aa13□□□□□ -0.33
CYSTM1-201ENST00000261811 UFSP1Q6NVU6 142 aa13□□□□□ -0.33
CYSTM1-201ENST00000261811 UQCC3Q6UW78 93 aa13□□□□□ -0.33
CYSTM1-201ENST00000261811 LINC00588Q9Y4M8 146 aa13□□□□□ -0.33
CYSTM1-201ENST00000261811 FAM231BA6NCW3 169 aa12.99□□□□□ -0.33
CYSTM1-201ENST00000261811 F5H697 171 aa12.99□□□□□ -0.33
CYSTM1-201ENST00000261811 ESRGQ1W209 222 aa12.99□□□□□ -0.33
CYSTM1-201ENST00000261811 SMIM15Q7Z3B0 74 aa12.99□□□□□ -0.33
CYSTM1-201ENST00000261811 C14orf178Q8N769 122 aaPredicted RBP12.99□□□□□ -0.33
CYSTM1-201ENST00000261811 OR10G8Q8NGN5 311 aa12.99□□□□□ -0.33
CYSTM1-201ENST00000261811 GFRA4Q9GZZ7 299 aa12.99□□□□□ -0.33
CYSTM1-201ENST00000261811 NTF3P20783 257 aa12.98□□□□□ -0.33
CYSTM1-201ENST00000261811 TWIST1Q15672 202 aa12.98□□□□□ -0.33
CYSTM1-201ENST00000261811 TSKUQ8WUA8 353 aa12.98□□□□□ -0.33
CYSTM1-201ENST00000261811 MRPS16Q9Y3D3 137 aaKnown RBP12.98□□□□□ -0.33
CYSTM1-201ENST00000261811 PLECQ15149 4684 aaKnown RBP12.98□□□□□ -0.33
CYSTM1-201ENST00000261811 TRBV10-1A0A0K0K1A3 114 aa12.97□□□□□ -0.33
CYSTM1-201ENST00000261811 PNRC1Q12796 327 aaPredicted RBP12.97□□□□□ -0.33
CYSTM1-201ENST00000261811 LYPD5Q6UWN5 251 aa12.97□□□□□ -0.33
CYSTM1-201ENST00000261811 LOC100131303A0A0U1RQF7 123 aa12.96□□□□□ -0.33
CYSTM1-201ENST00000261811 FOXA3P55318 350 aaPredicted RBP12.96□□□□□ -0.33
CYSTM1-201ENST00000261811 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.96□□□□□ -0.33
CYSTM1-201ENST00000261811 UPK3BQ9BT76 320 aa12.96□□□□□ -0.33
CYSTM1-201ENST00000261811 CNFNQ9BYD5 112 aa12.96□□□□□ -0.33
CYSTM1-201ENST00000261811 H7C1H1 209 aa12.95□□□□□ -0.34
CYSTM1-201ENST00000261811 RPL36AP83881 106 aaKnown RBP12.95□□□□□ -0.34
CYSTM1-201ENST00000261811 Q6ZSN1 163 aa12.95□□□□□ -0.34
CYSTM1-201ENST00000261811 ATP6V0E2Q8NHE4 81 aa12.95□□□□□ -0.34
CYSTM1-201ENST00000261811 GTSF1Q8WW33 167 aa12.95□□□□□ -0.34
CYSTM1-201ENST00000261811 RPL36ALQ969Q0 106 aaKnown RBP12.95□□□□□ -0.34
CYSTM1-201ENST00000261811 PGLYRP4Q96LB8 373 aa12.95□□□□□ -0.34
CYSTM1-201ENST00000261811 DPH3P1Q9H4G8 78 aa12.95□□□□□ -0.34
CYSTM1-201ENST00000261811 ALMS1Q8TCU4 4167 aa12.94□□□□□ -0.34
CYSTM1-201ENST00000261811 HIGD1CA8MV81 97 aa12.94□□□□□ -0.34
CYSTM1-201ENST00000261811 MGPP08493 103 aa12.94□□□□□ -0.34
CYSTM1-201ENST00000261811 ZNRF2Q8NHG8 242 aa12.94□□□□□ -0.34
CYSTM1-201ENST00000261811 Q9H8V8 135 aa12.94□□□□□ -0.34
CYSTM1-201ENST00000261811 MSRB1Q9NZV6 116 aa12.94□□□□□ -0.34
CYSTM1-201ENST00000261811 V9GYV3 84 aa12.94□□□□□ -0.34
CYSTM1-201ENST00000261811 GAGE12JA6NER3 117 aa12.93□□□□□ -0.34
CYSTM1-201ENST00000261811 PPP1R2P9O14990 202 aa12.93□□□□□ -0.34
CYSTM1-201ENST00000261811 TIRAPP58753 221 aa12.93□□□□□ -0.34
CYSTM1-201ENST00000261811 GAGE1Q13065 139 aa12.93□□□□□ -0.34
CYSTM1-201ENST00000261811 GAGE4Q13068 117 aa12.93□□□□□ -0.34
CYSTM1-201ENST00000261811 GAGE5Q13069 117 aa12.93□□□□□ -0.34
CYSTM1-201ENST00000261811 GAGE13Q4V321 117 aa12.93□□□□□ -0.34
CYSTM1-201ENST00000261811 NAT8BQ9UHF3 227 aa12.93□□□□□ -0.34
CYSTM1-201ENST00000261811 IGLV2-18A0A075B6J9 118 aa12.92□□□□□ -0.34
CYSTM1-201ENST00000261811 A0A1B0GUT8 65 aa12.92□□□□□ -0.34
CYSTM1-201ENST00000261811 TTC32Q5I0X7 151 aa12.92□□□□□ -0.34
CYSTM1-201ENST00000261811 COMMD7Q86VX2 200 aa12.92□□□□□ -0.34
CYSTM1-201ENST00000261811 GTSF1LQ9H1H1 148 aa12.92□□□□□ -0.34
CYSTM1-201ENST00000261811 KIF25-AS1Q9Y6Z4 181 aa12.92□□□□□ -0.34
CYSTM1-201ENST00000261811 TRBV7-3A0A075B6L6 115 aa12.91□□□□□ -0.34
CYSTM1-201ENST00000261811 TRAV8-6A0A0B4J262 113 aa12.91□□□□□ -0.34
CYSTM1-201ENST00000261811 SIVA1O15304 175 aa12.91□□□□□ -0.34
CYSTM1-201ENST00000261811 EVI2AP22794 236 aa12.91□□□□□ -0.34
CYSTM1-201ENST00000261811 A0A087WWC5 75 aa12.9□□□□□ -0.34
CYSTM1-201ENST00000261811 F8W036 122 aa12.9□□□□□ -0.34
CYSTM1-201ENST00000261811 MT-ND4LP03901 98 aa12.9□□□□□ -0.34
CYSTM1-201ENST00000261811 RIGQ13278 110 aa12.9□□□□□ -0.34
CYSTM1-201ENST00000261811 TRAV9-2A0A087WT02 112 aa12.89□□□□□ -0.35
CYSTM1-201ENST00000261811 TMEM218A2RU14 115 aa12.89□□□□□ -0.35
CYSTM1-201ENST00000261811 M0R2N4 97 aa12.89□□□□□ -0.35
CYSTM1-201ENST00000261811 NBDYA0A0U1RRE5 68 aa12.88□□□□□ -0.35
CYSTM1-201ENST00000261811 LINC00862A6NCI5 91 aa12.88□□□□□ -0.35
CYSTM1-201ENST00000261811 OR10J3Q5JRS4 329 aa12.88□□□□□ -0.35
CYSTM1-201ENST00000261811 ANAPC16Q96DE5 110 aa12.88□□□□□ -0.35
CYSTM1-201ENST00000261811 DNAJC30Q96LL9 226 aa12.88□□□□□ -0.35
CYSTM1-201ENST00000261811 TNFRSF18Q9Y5U5 241 aa12.88□□□□□ -0.35
CYSTM1-201ENST00000261811 SMIM27A0A1W2PRY6 76 aa12.88□□□□□ -0.35
CYSTM1-201ENST00000261811 K7EP13 123 aa12.88□□□□□ -0.35
CYSTM1-201ENST00000261811 LELP1Q5T871 98 aa12.88□□□□□ -0.35
CYSTM1-201ENST00000261811 NUP35Q8NFH5 326 aa12.88□□□□□ -0.35
CYSTM1-201ENST00000261811 A0A1B0GW15 77 aa12.87□□□□□ -0.35
CYSTM1-201ENST00000261811 LINC00694P0DN24 101 aa12.87□□□□□ -0.35
CYSTM1-201ENST00000261811 LINC00315P59091 139 aa12.87□□□□□ -0.35
CYSTM1-201ENST00000261811 RASL11AQ6T310 242 aa12.87□□□□□ -0.35
CYSTM1-201ENST00000261811 NEXN-AS1Q8NBZ9 246 aa12.87□□□□□ -0.35
CYSTM1-201ENST00000261811 SEC11CQ9BY50 192 aa12.87□□□□□ -0.35
CYSTM1-201ENST00000261811 S100A8P05109 93 aa12.86□□□□□ -0.35
CYSTM1-201ENST00000261811 UBE2D3P61077 147 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms