RNA–Protein interactions for RNA: ENST00000261769.9

CDH1-201, Transcript of cadherin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH1, Length 4,889 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-201ENST00000261769 USP9YO00507 2555 aaPredicted RBP10.64□□□□□ -0.71
CDH1-201ENST00000261769 P0C879 139 aa10.64□□□□□ -0.71
CDH1-201ENST00000261769 SFTA2Q6UW10 78 aa10.64□□□□□ -0.71
CDH1-201ENST00000261769 Q6ZQT7 251 aa10.64□□□□□ -0.71
CDH1-201ENST00000261769 PRAC2D3DTV9 90 aa10.64□□□□□ -0.71
CDH1-201ENST00000261769 H3BUT2 72 aa10.64□□□□□ -0.71
CDH1-201ENST00000261769 SPATA25Q9BR10 227 aa10.64□□□□□ -0.71
CDH1-201ENST00000261769 SPANXA1Q9NS26 97 aa10.64□□□□□ -0.71
CDH1-201ENST00000261769 SMIM9A6NGZ8 99 aa10.64□□□□□ -0.71
CDH1-201ENST00000261769 IGLC2P0DOY2 106 aa10.63□□□□□ -0.71
CDH1-201ENST00000261769 MED14OSP0DP75 135 aa10.63□□□□□ -0.71
CDH1-201ENST00000261769 CLPSL2Q6UWE3 100 aa10.63□□□□□ -0.71
CDH1-201ENST00000261769 Q6ZWC4 215 aa10.63□□□□□ -0.71
CDH1-201ENST00000261769 C11orf45Q8TAV5 145 aa10.63□□□□□ -0.71
CDH1-201ENST00000261769 ZNF479Q96JC4 524 aa10.63□□□□□ -0.71
CDH1-201ENST00000261769 CDK2AP2O75956 126 aa10.62□□□□□ -0.71
CDH1-201ENST00000261769 CRYGBP07316 175 aa10.62□□□□□ -0.71
CDH1-201ENST00000261769 ZNF503Q96F45 646 aa10.62□□□□□ -0.71
CDH1-201ENST00000261769 PRO0255Q9UI72 69 aa10.62□□□□□ -0.71
CDH1-201ENST00000261769 IGLL1P15814 213 aa10.62□□□□□ -0.71
CDH1-201ENST00000261769 XCL1P47992 114 aa10.62□□□□□ -0.71
CDH1-201ENST00000261769 ZNF702PQ9H963 129 aa10.62□□□□□ -0.71
CDH1-201ENST00000261769 hDV102S1A0JD36 115 aa10.62□□□□□ -0.71
CDH1-201ENST00000261769 UTF1Q5T230 341 aa10.62□□□□□ -0.71
CDH1-201ENST00000261769 NDUFAF3Q9BU61 184 aa10.62□□□□□ -0.71
CDH1-201ENST00000261769 LAMTOR3Q9UHA4 124 aa10.62□□□□□ -0.71
CDH1-201ENST00000261769 POLR3KQ9Y2Y1 108 aaPredicted RBP10.62□□□□□ -0.71
CDH1-201ENST00000261769 K7EQG2 157 aa10.61□□□□□ -0.71
CDH1-201ENST00000261769 ESM1Q9NQ30 184 aa10.61□□□□□ -0.71
CDH1-201ENST00000261769 NDUFA12Q9UI09 145 aa10.61□□□□□ -0.71
CDH1-201ENST00000261769 F8VRH5 84 aa10.61□□□□□ -0.71
CDH1-201ENST00000261769 DEFB4AO15263 64 aa10.61□□□□□ -0.71
CDH1-201ENST00000261769 CRIP3Q6Q6R5 217 aa10.61□□□□□ -0.71
CDH1-201ENST00000261769 LYPD6BQ8NI32 183 aa10.61□□□□□ -0.71
CDH1-201ENST00000261769 DOPEY1Q5JWR5 2465 aa10.61□□□□□ -0.71
CDH1-201ENST00000261769 KMT2EQ8IZD2 1858 aa10.61□□□□□ -0.71
CDH1-201ENST00000261769 IGLL5B9A064 214 aa10.61□□□□□ -0.71
CDH1-201ENST00000261769 K7EN84 100 aa10.61□□□□□ -0.71
CDH1-201ENST00000261769 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.61□□□□□ -0.71
CDH1-201ENST00000261769 NXPH4O95158 308 aa10.6□□□□□ -0.71
CDH1-201ENST00000261769 KLF12Q9Y4X4 402 aa10.6□□□□□ -0.71
CDH1-201ENST00000261769 SUMO4Q6EEV6 95 aa10.6□□□□□ -0.71
CDH1-201ENST00000261769 BBC3Q96PG8 261 aaPredicted RBP10.6□□□□□ -0.71
CDH1-201ENST00000261769 ODF3Q96PU9 254 aa10.6□□□□□ -0.71
CDH1-201ENST00000261769 TRBV7-3A0A075B6L6 115 aa10.6□□□□□ -0.71
CDH1-201ENST00000261769 AMTNQ6UX39 209 aa10.6□□□□□ -0.71
CDH1-201ENST00000261769 EPG5Q9HCE0 2579 aa10.6□□□□□ -0.71
CDH1-201ENST00000261769 NDUFA7O95182 113 aa10.59□□□□□ -0.71
CDH1-201ENST00000261769 BRWD1-AS2P59051 145 aa10.59□□□□□ -0.71
CDH1-201ENST00000261769 MAJINQ3KP22 176 aa10.59□□□□□ -0.71
CDH1-201ENST00000261769 IGKV1D-37A0A075B6S9 117 aa10.59□□□□□ -0.71
CDH1-201ENST00000261769 NACAE9PAV3 2078 aa10.59□□□□□ -0.71
CDH1-201ENST00000261769 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.59□□□□□ -0.71
CDH1-201ENST00000261769 TRBV6-1A0A0K0K1D8 114 aa10.59□□□□□ -0.71
CDH1-201ENST00000261769 IGKV2-29A2NJV5 120 aaPredicted RBP10.59□□□□□ -0.71
CDH1-201ENST00000261769 PSMB8P28062 276 aa10.59□□□□□ -0.71
CDH1-201ENST00000261769 Q8N6K4 173 aa10.59□□□□□ -0.71
CDH1-201ENST00000261769 IGHV3-30P01768 117 aa10.58□□□□□ -0.72
CDH1-201ENST00000261769 IGHV3-33P01772 117 aa10.58□□□□□ -0.72
CDH1-201ENST00000261769 IGHV3-30-3P0DP02 117 aa10.58□□□□□ -0.72
CDH1-201ENST00000261769 IGHV3-30-5P0DP03 117 aa10.58□□□□□ -0.72
CDH1-201ENST00000261769 UBE2BP63146 152 aa10.58□□□□□ -0.72
CDH1-201ENST00000261769 SRCAPQ6ZRS2 3230 aa10.58□□□□□ -0.72
CDH1-201ENST00000261769 Q6ZPA2 131 aa10.58□□□□□ -0.72
CDH1-201ENST00000261769 ZNF295-AS1Q8N0V1 137 aa10.58□□□□□ -0.72
CDH1-201ENST00000261769 LGALS9BQ3B8N2 356 aa10.58□□□□□ -0.72
CDH1-201ENST00000261769 LGALS9CQ6DKI2 356 aa10.58□□□□□ -0.72
CDH1-201ENST00000261769 TRBV10-1A0A0K0K1A3 114 aa10.57□□□□□ -0.72
CDH1-201ENST00000261769 LYRM9A8MSI8 78 aa10.57□□□□□ -0.72
CDH1-201ENST00000261769 STPG4Q8N801 248 aa10.57□□□□□ -0.72
CDH1-201ENST00000261769 C1orf229Q6ZS94 237 aaPredicted RBP10.57□□□□□ -0.72
CDH1-201ENST00000261769 DEFB1P60022 68 aa10.57□□□□□ -0.72
CDH1-201ENST00000261769 MRPL35Q9NZE8 188 aaKnown RBP10.57□□□□□ -0.72
CDH1-201ENST00000261769 EIF4EBP1Q13541 118 aaPredicted RBP10.56□□□□□ -0.72
CDH1-201ENST00000261769 CAMK2N2Q96S95 79 aa10.56□□□□□ -0.72
CDH1-201ENST00000261769 TMEM126AQ9H061 195 aa10.56□□□□□ -0.72
CDH1-201ENST00000261769 TRAV4A0A0B4J268 109 aa10.56□□□□□ -0.72
CDH1-201ENST00000261769 COX7A2LO14548 114 aa10.56□□□□□ -0.72
CDH1-201ENST00000261769 TTC32Q5I0X7 151 aa10.55□□□□□ -0.72
CDH1-201ENST00000261769 SAMD5Q5TGI4 173 aa10.55□□□□□ -0.72
CDH1-201ENST00000261769 ASPHD1Q5U4P2 390 aa10.55□□□□□ -0.72
CDH1-201ENST00000261769 RNASE13Q5GAN3 156 aaKnown RBP10.55□□□□□ -0.72
CDH1-201ENST00000261769 C10orf91Q5T1B1 145 aa10.55□□□□□ -0.72
CDH1-201ENST00000261769 MIFP14174 115 aa10.55□□□□□ -0.72
CDH1-201ENST00000261769 SLC25A29Q8N8R3 303 aa10.55□□□□□ -0.72
CDH1-201ENST00000261769 C5orf38Q86SI9 138 aa10.55□□□□□ -0.72
CDH1-201ENST00000261769 C2CD3Q4AC94 2353 aa10.54□□□□□ -0.72
CDH1-201ENST00000261769 AVPP01185 164 aa10.54□□□□□ -0.72
CDH1-201ENST00000261769 C10orf99Q6UWK7 81 aa10.54□□□□□ -0.72
CDH1-201ENST00000261769 SMR3AQ99954 134 aa10.54□□□□□ -0.72
CDH1-201ENST00000261769 SNHG12Q9BXW3 62 aa10.54□□□□□ -0.72
CDH1-201ENST00000261769 J3QQQ9 107 aa10.54□□□□□ -0.72
CDH1-201ENST00000261769 EDA2RQ9HAV5 297 aa10.54□□□□□ -0.72
CDH1-201ENST00000261769 FN1P02751 2386 aaKnown RBP10.54□□□□□ -0.72
CDH1-201ENST00000261769 TRAV8-2A0A0B4J237 113 aa10.53□□□□□ -0.72
CDH1-201ENST00000261769 C10orf126Q8N4M7 172 aa10.53□□□□□ -0.72
CDH1-201ENST00000261769 RPL39LQ96EH5 51 aaKnown RBP10.53□□□□□ -0.72
CDH1-201ENST00000261769 MSRB1Q9NZV6 116 aa10.53□□□□□ -0.72
CDH1-201ENST00000261769 A0A1W2PPR1 153 aa10.53□□□□□ -0.72
CDH1-201ENST00000261769 SPINK8P0C7L1 97 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 83.8 ms