RNA–Protein interactions for RNA: ENST00000249923.7

COPB1-201, Transcript of coatomer protein complex subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-201ENST00000249923 MT-ATP8P03928 68 aa7.64□□□□□ -1.19
COPB1-201ENST00000249923 SRSF1Q07955 248 aaKnown RBP eCLIP7.64□□□□□ -1.193e-14■■■□□ 17.4
COPB1-201ENST00000249923 FAM19A4Q96LR4 140 aa7.64□□□□□ -1.19
COPB1-201ENST00000249923 KIR2DL4Q99706 377 aa7.64□□□□□ -1.19
COPB1-201ENST00000249923 JMJD1CQ15652 2540 aa7.63□□□□□ -1.19
COPB1-201ENST00000249923 B5MCH6 92 aa7.63□□□□□ -1.19
COPB1-201ENST00000249923 AVPP01185 164 aa7.63□□□□□ -1.19
COPB1-201ENST00000249923 PRORYQ9H606 182 aa7.62□□□□□ -1.19
COPB1-201ENST00000249923 NOTCH2Q04721 2471 aa7.62□□□□□ -1.19
COPB1-201ENST00000249923 FN1P02751 2386 aaKnown RBP7.62□□□□□ -1.19
COPB1-201ENST00000249923 IGHV3-73A0A0B4J1V6 119 aa7.62□□□□□ -1.19
COPB1-201ENST00000249923 C9JAW5 83 aa7.62□□□□□ -1.19
COPB1-201ENST00000249923 TMEM238LA0A1B0GVL6 79 aa7.62□□□□□ -1.19
COPB1-201ENST00000249923 PRSS29PA6NIE9 313 aa7.62□□□□□ -1.19
COPB1-201ENST00000249923 A6NJY4 79 aa7.62□□□□□ -1.19
COPB1-201ENST00000249923 FAM223BA6NKX1 122 aa7.62□□□□□ -1.19
COPB1-201ENST00000249923 FAM223AQ8IWN6 122 aa7.62□□□□□ -1.19
COPB1-201ENST00000249923 RASL10AQ92737 203 aa7.62□□□□□ -1.19
COPB1-201ENST00000249923 SPANXB1Q9NS25 103 aaPredicted RBP7.62□□□□□ -1.19
COPB1-201ENST00000249923 TRAV12-3A0A0B4J271 114 aa7.61□□□□□ -1.19
COPB1-201ENST00000249923 F8W1H4 67 aa7.61□□□□□ -1.19
COPB1-201ENST00000249923 IGHV4-30-2A0A087WSY4 118 aa7.61□□□□□ -1.19
COPB1-201ENST00000249923 SIVA1O15304 175 aa7.61□□□□□ -1.19
COPB1-201ENST00000249923 TMEM95Q3KNT9 176 aa7.61□□□□□ -1.19
COPB1-201ENST00000249923 RNASE13Q5GAN3 156 aaKnown RBP7.61□□□□□ -1.19
COPB1-201ENST00000249923 C2orf66Q6UXQ4 117 aa7.61□□□□□ -1.19
COPB1-201ENST00000249923 DLX4Q92988 240 aaPredicted RBP7.61□□□□□ -1.19
COPB1-201ENST00000249923 ZFYVE26Q68DK2 2539 aa7.61□□□□□ -1.19
COPB1-201ENST00000249923 RNASE3P12724 160 aaKnown RBP7.61□□□□□ -1.19
COPB1-201ENST00000249923 RRN3P1Q2M238 152 aa7.61□□□□□ -1.19
COPB1-201ENST00000249923 TEX15Q9BXT5 2789 aa7.6□□□□□ -1.19
COPB1-201ENST00000249923 H3BUX3 64 aa7.6□□□□□ -1.19
COPB1-201ENST00000249923 H7C1H1 209 aa7.6□□□□□ -1.19
COPB1-201ENST00000249923 GNRH2O43555 120 aa7.6□□□□□ -1.19
COPB1-201ENST00000249923 IGHG2P01859 326 aa7.6□□□□□ -1.19
COPB1-201ENST00000249923 TTC32Q5I0X7 151 aa7.6□□□□□ -1.19
COPB1-201ENST00000249923 C9orf139Q6ZV77 190 aa7.6□□□□□ -1.19
COPB1-201ENST00000249923 PLEKHB2Q96CS7 222 aa7.6□□□□□ -1.19
COPB1-201ENST00000249923 MYMXA0A1B0GTQ4 84 aa7.6□□□□□ -1.19
COPB1-201ENST00000249923 LGALS3P17931 250 aaKnown RBP7.6□□□□□ -1.19
COPB1-201ENST00000249923 RPL39P62891 51 aaKnown RBP7.6□□□□□ -1.19
COPB1-201ENST00000249923 ZNF56Q15929 161 aa7.6□□□□□ -1.19
COPB1-201ENST00000249923 C10orf99Q6UWK7 81 aa7.6□□□□□ -1.19
COPB1-201ENST00000249923 C10orf105Q8TEF2 133 aa7.6□□□□□ -1.19
COPB1-201ENST00000249923 PHLDA1Q8WV24 401 aaPredicted RBP7.6□□□□□ -1.19
COPB1-201ENST00000249923 JPT2Q9H910 190 aa7.6□□□□□ -1.19
COPB1-201ENST00000249923 A6NDX4 124 aa7.59□□□□□ -1.19
COPB1-201ENST00000249923 NDUFA4O00483 81 aa7.59□□□□□ -1.19
COPB1-201ENST00000249923 PF4V1P10720 104 aa7.59□□□□□ -1.19
COPB1-201ENST00000249923 HERVK_113P61574 105 aa7.59□□□□□ -1.19
COPB1-201ENST00000249923 CFHR3Q02985 330 aa7.59□□□□□ -1.19
COPB1-201ENST00000249923 TEX29Q8N6K0 151 aa7.59□□□□□ -1.19
COPB1-201ENST00000249923 A8MWV9 139 aa7.59□□□□□ -1.19
COPB1-201ENST00000249923 APRG1Q8IVJ8 170 aa7.59□□□□□ -1.19
COPB1-201ENST00000249923 OR10J6PQ8NGY7 276 aa7.59□□□□□ -1.19
COPB1-201ENST00000249923 RNF183Q96D59 192 aa7.59□□□□□ -1.19
COPB1-201ENST00000249923 OPRPNQ99935 248 aaPredicted RBP7.59□□□□□ -1.19
COPB1-201ENST00000249923 IGLV1-40P01703 118 aa7.59□□□□□ -1.19
COPB1-201ENST00000249923 NRGNQ92686 78 aa7.59□□□□□ -1.19
COPB1-201ENST00000249923 SMIM2Q9BVW6 85 aa7.59□□□□□ -1.19
COPB1-201ENST00000249923 NF1P21359 2839 aa7.59□□□□□ -1.2
COPB1-201ENST00000249923 SNCGO76070 127 aa7.58□□□□□ -1.2
COPB1-201ENST00000249923 DUSP14O95147 198 aaKnown RBP7.58□□□□□ -1.2
COPB1-201ENST00000249923 LINC00315P59091 139 aa7.58□□□□□ -1.2
COPB1-201ENST00000249923 ANKRD17O75179 2603 aaKnown RBP7.58□□□□□ -1.2
COPB1-201ENST00000249923 UBR5O95071 2799 aaPredicted RBP7.58□□□□□ -1.2
COPB1-201ENST00000249923 F8VRH5 84 aa7.58□□□□□ -1.2
COPB1-201ENST00000249923 TRPT1Q86TN4 253 aaKnown RBP7.58□□□□□ -1.2
COPB1-201ENST00000249923 TP53TG1Q9Y2A0 90 aa7.58□□□□□ -1.2
COPB1-201ENST00000249923 CD7P09564 240 aa7.58□□□□□ -1.2
COPB1-201ENST00000249923 GATA3P23771 443 aa7.58□□□□□ -1.2
COPB1-201ENST00000249923 SUMO2P61956 95 aaKnown RBP7.58□□□□□ -1.2
COPB1-201ENST00000249923 A0A087WX48 190 aa7.57□□□□□ -1.2
COPB1-201ENST00000249923 PLNP26678 52 aa7.57□□□□□ -1.2
COPB1-201ENST00000249923 ASIPP42127 132 aa7.57□□□□□ -1.2
COPB1-201ENST00000249923 LENEPQ9Y5L5 61 aa7.57□□□□□ -1.2
COPB1-201ENST00000249923 KIF25-AS1Q9Y6Z4 181 aa7.57□□□□□ -1.2
COPB1-201ENST00000249923 FOXI1Q12951 378 aa7.57□□□□□ -1.2
COPB1-201ENST00000249923 MRAP2Q96G30 205 aa7.57□□□□□ -1.2
COPB1-201ENST00000249923 RHPN1-AS1Q9BWJ2 59 aa7.57□□□□□ -1.2
COPB1-201ENST00000249923 E9PLD3 99 aa7.57□□□□□ -1.2
COPB1-201ENST00000249923 ZNF625Q96I27 306 aaPredicted RBP7.57□□□□□ -1.2
COPB1-201ENST00000249923 HIGD1BQ9P298 99 aa7.57□□□□□ -1.2
COPB1-201ENST00000249923 NAV2Q8IVL1 2488 aa7.56□□□□□ -1.2
COPB1-201ENST00000249923 TRAV12-2A0A075B6T6 113 aa7.56□□□□□ -1.2
COPB1-201ENST00000249923 BRI3O95415 125 aa7.56□□□□□ -1.2
COPB1-201ENST00000249923 DCANP1Q8TF63 244 aa7.56□□□□□ -1.2
COPB1-201ENST00000249923 SPXQ9BT56 116 aa7.56□□□□□ -1.2
COPB1-201ENST00000249923 LRRK2Q5S007 2527 aa7.56□□□□□ -1.2
COPB1-201ENST00000249923 CCL19Q99731 98 aa7.56□□□□□ -1.2
COPB1-201ENST00000249923 TSHBP01222 138 aa7.55□□□□□ -1.2
COPB1-201ENST00000249923 LGALS1P09382 135 aaKnown RBP7.55□□□□□ -1.2
COPB1-201ENST00000249923 ZFAND6Q6FIF0 208 aa7.55□□□□□ -1.2
COPB1-201ENST00000249923 NEXN-AS1Q8NBZ9 246 aa7.55□□□□□ -1.2
COPB1-201ENST00000249923 TOMM6Q96B49 74 aa7.55□□□□□ -1.2
COPB1-201ENST00000249923 PIMREGQ9BSJ6 248 aa7.55□□□□□ -1.2
COPB1-201ENST00000249923 SMPXQ9UHP9 88 aa7.55□□□□□ -1.2
COPB1-201ENST00000249923 TRAV21A0A0B4J279 112 aa7.55□□□□□ -1.2
COPB1-201ENST00000249923 KLLNB2CW77 178 aa7.55□□□□□ -1.2
COPB1-201ENST00000249923 RS1O15537 224 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms