RNA–Protein interactions for RNA: ENST00000243108.4

HOXC6-201, Transcript of homeobox C6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC6, Length 1,733 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-201ENST00000243108 LAMTOR2Q9Y2Q5 125 aa12.64□□□□□ -0.39
HOXC6-201ENST00000243108 HLA-DRB4X5D2U9 266 aa12.64□□□□□ -0.39
HOXC6-201ENST00000243108 IGHV1-24A0A0C4DH33 117 aa12.63□□□□□ -0.39
HOXC6-201ENST00000243108 OR4C46A6NHA9 309 aa12.63□□□□□ -0.39
HOXC6-201ENST00000243108 NXPH4O95158 308 aa12.63□□□□□ -0.39
HOXC6-201ENST00000243108 IGKV3-20P01619 116 aa12.63□□□□□ -0.39
HOXC6-201ENST00000243108 FAM159AQ6UWV7 190 aa12.63□□□□□ -0.39
HOXC6-201ENST00000243108 OVOL2Q9BRP0 275 aa12.63□□□□□ -0.39
HOXC6-201ENST00000243108 MAP6D1Q9H9H5 199 aa12.63□□□□□ -0.39
HOXC6-201ENST00000243108 EVI2AP22794 236 aa12.62□□□□□ -0.39
HOXC6-201ENST00000243108 KNCNA6PVL3 124 aa12.62□□□□□ -0.39
HOXC6-201ENST00000243108 SMKR1H3BMG3 65 aa12.62□□□□□ -0.39
HOXC6-201ENST00000243108 H3BMM0 161 aa12.62□□□□□ -0.39
HOXC6-201ENST00000243108 NPYP01303 97 aa12.62□□□□□ -0.39
HOXC6-201ENST00000243108 C3orf79P0CE67 100 aa12.62□□□□□ -0.39
HOXC6-201ENST00000243108 KRTDAPP60985 99 aa12.62□□□□□ -0.39
HOXC6-201ENST00000243108 ZNF124Q15973 351 aa12.62□□□□□ -0.39
HOXC6-201ENST00000243108 SPINK13Q1W4C9 94 aa12.62□□□□□ -0.39
HOXC6-201ENST00000243108 Q8N976 141 aa12.62□□□□□ -0.39
HOXC6-201ENST00000243108 AP5S1Q9NUS5 200 aa12.62□□□□□ -0.39
HOXC6-201ENST00000243108 HYDINQ4G0P3 5121 aa12.62□□□□□ -0.39
HOXC6-201ENST00000243108 NCR2O95944 276 aa12.61□□□□□ -0.39
HOXC6-201ENST00000243108 PRSS3P2Q8NHM4 247 aa12.61□□□□□ -0.39
HOXC6-201ENST00000243108 PHLDA3Q9Y5J5 127 aa12.61□□□□□ -0.39
HOXC6-201ENST00000243108 AGRNO00468 2067 aa12.6□□□□□ -0.39
HOXC6-201ENST00000243108 TRAV12-2A0A075B6T6 113 aa12.6□□□□□ -0.39
HOXC6-201ENST00000243108 IFI27P40305 119 aaPredicted RBP12.6□□□□□ -0.39
HOXC6-201ENST00000243108 FA2HQ7L5A8 372 aa12.6□□□□□ -0.39
HOXC6-201ENST00000243108 TIMM8BQ9Y5J9 83 aaPredicted RBP12.6□□□□□ -0.39
HOXC6-201ENST00000243108 PMCHL1Q16048 86 aa12.59□□□□□ -0.39
HOXC6-201ENST00000243108 TEX43Q6ZNM6 134 aa12.59□□□□□ -0.39
HOXC6-201ENST00000243108 M0R381 172 aa12.59□□□□□ -0.39
HOXC6-201ENST00000243108 PKIAP61925 76 aa12.59□□□□□ -0.39
HOXC6-201ENST00000243108 CLUHP3Q96NS8 147 aa12.59□□□□□ -0.39
HOXC6-201ENST00000243108 IGHV1OR15-1A0A075B7D0 117 aa12.58□□□□□ -0.4
HOXC6-201ENST00000243108 LCE6AA0A183 80 aa12.58□□□□□ -0.4
HOXC6-201ENST00000243108 GAS8-AS1O95177 125 aa12.58□□□□□ -0.4
HOXC6-201ENST00000243108 TNFRSF6BO95407 300 aa12.58□□□□□ -0.4
HOXC6-201ENST00000243108 ZNF664Q8N3J9 261 aa12.58□□□□□ -0.4
HOXC6-201ENST00000243108 C9orf85Q96MD7 179 aa12.58□□□□□ -0.4
HOXC6-201ENST00000243108 MAP1LC3AQ9H492 121 aa12.58□□□□□ -0.4
HOXC6-201ENST00000243108 IGHV3-16A0A0C4DH30 117 aa12.57□□□□□ -0.4
HOXC6-201ENST00000243108 LOC389332A0A1B0GUA5 103 aa12.57□□□□□ -0.4
HOXC6-201ENST00000243108 LINC01546A6NGU7 62 aa12.57□□□□□ -0.4
HOXC6-201ENST00000243108 CRXO43186 299 aaPredicted RBP12.57□□□□□ -0.4
HOXC6-201ENST00000243108 RPL35AP18077 110 aaKnown RBP12.57□□□□□ -0.4
HOXC6-201ENST00000243108 MRAP2Q96G30 205 aa12.57□□□□□ -0.4
HOXC6-201ENST00000243108 SPRY2O43597 315 aa12.57□□□□□ -0.4
HOXC6-201ENST00000243108 LEPROTL1O95214 131 aa12.57□□□□□ -0.4
HOXC6-201ENST00000243108 BTF3P20290 206 aaKnown RBP12.57□□□□□ -0.4
HOXC6-201ENST00000243108 DEFB135Q30KP9 77 aa12.57□□□□□ -0.4
HOXC6-201ENST00000243108 NRACQ8N912 160 aa12.57□□□□□ -0.4
HOXC6-201ENST00000243108 AP1S3Q96PC3 154 aa12.57□□□□□ -0.4
HOXC6-201ENST00000243108 DPH3P1Q9H4G8 78 aa12.57□□□□□ -0.4
HOXC6-201ENST00000243108 PRSS47A8MTI9 375 aa12.56□□□□□ -0.4
HOXC6-201ENST00000243108 GATA1P15976 413 aaPredicted RBP12.56□□□□□ -0.4
HOXC6-201ENST00000243108 MUC4Q99102 2169 aa12.55□□□□□ -0.4
HOXC6-201ENST00000243108 A0A096LNJ9 63 aa12.55□□□□□ -0.4
HOXC6-201ENST00000243108 LINC00587B1AMM8 73 aa12.55□□□□□ -0.4
HOXC6-201ENST00000243108 TSTD3H0UI37 97 aa12.55□□□□□ -0.4
HOXC6-201ENST00000243108 RBMY1A1P0DJD3 496 aaKnown RBP12.55□□□□□ -0.4
HOXC6-201ENST00000243108 RBMY1CP0DJD4 496 aa12.55□□□□□ -0.4
HOXC6-201ENST00000243108 APOC4P55056 127 aa12.55□□□□□ -0.4
HOXC6-201ENST00000243108 RBMY1FQ15415 496 aaKnown RBP12.55□□□□□ -0.4
HOXC6-201ENST00000243108 POM121L12Q8N7R1 296 aa12.55□□□□□ -0.4
HOXC6-201ENST00000243108 LINC00173Q6ZV60 143 aa12.54□□□□□ -0.4
HOXC6-201ENST00000243108 TMEM70Q9BUB7 260 aa12.54□□□□□ -0.4
HOXC6-201ENST00000243108 PRO1933Q9H354 126 aa12.54□□□□□ -0.4
HOXC6-201ENST00000243108 NXT2Q9NPJ8 142 aaKnown RBP12.54□□□□□ -0.4
HOXC6-201ENST00000243108 HSPB8Q9UJY1 196 aa12.54□□□□□ -0.4
HOXC6-201ENST00000243108 ALMS1Q8TCU4 4167 aa12.54□□□□□ -0.4
HOXC6-201ENST00000243108 KIR2DL5BA0A0G2JN68 375 aa12.54□□□□□ -0.4
HOXC6-201ENST00000243108 KIR2DL5BA0A0G2JPC4 375 aa12.54□□□□□ -0.4
HOXC6-201ENST00000243108 FXYD7P58549 80 aa12.54□□□□□ -0.4
HOXC6-201ENST00000243108 KIR2DL5AQ8N109 375 aa12.54□□□□□ -0.4
HOXC6-201ENST00000243108 C14orf178Q8N769 122 aaPredicted RBP12.54□□□□□ -0.4
HOXC6-201ENST00000243108 KIR2DL5BQ8NHK3 375 aa12.54□□□□□ -0.4
HOXC6-201ENST00000243108 MDFICQ9P1T7 246 aa12.54□□□□□ -0.4
HOXC6-201ENST00000243108 KIF25-AS1Q9Y6Z4 181 aa12.54□□□□□ -0.4
HOXC6-201ENST00000243108 IGLV2-18A0A075B6J9 118 aa12.53□□□□□ -0.4
HOXC6-201ENST00000243108 TRGV11A0A075B6L2 103 aa12.53□□□□□ -0.4
HOXC6-201ENST00000243108 TRAV26-2A0A0B4J265 109 aa12.53□□□□□ -0.4
HOXC6-201ENST00000243108 RNF183Q96D59 192 aa12.53□□□□□ -0.4
HOXC6-201ENST00000243108 TP53TG1Q9Y2A0 90 aa12.53□□□□□ -0.4
HOXC6-201ENST00000243108 A0A0J9YWU9 116 aa12.52□□□□□ -0.41
HOXC6-201ENST00000243108 SYS1-DBNDD2H3BUS1 97 aa12.51□□□□□ -0.41
HOXC6-201ENST00000243108 CMC4P56277 68 aaPredicted RBP12.51□□□□□ -0.41
HOXC6-201ENST00000243108 LINC00315P59091 139 aa12.51□□□□□ -0.41
HOXC6-201ENST00000243108 Q8N8P6 123 aa12.51□□□□□ -0.41
HOXC6-201ENST00000243108 C20orf144Q9BQM9 153 aa12.51□□□□□ -0.41
HOXC6-201ENST00000243108 HBDP02042 147 aa12.51□□□□□ -0.41
HOXC6-201ENST00000243108 SPATA12Q7Z6I5 190 aa12.51□□□□□ -0.41
HOXC6-201ENST00000243108 IL17DQ8TAD2 202 aa12.51□□□□□ -0.41
HOXC6-201ENST00000243108 LINC00467Q9BRT7 94 aa12.51□□□□□ -0.41
HOXC6-201ENST00000243108 VAMP8Q9BV40 100 aa12.51□□□□□ -0.41
HOXC6-201ENST00000243108 SYT8Q8NBV8 401 aa12.5□□□□□ -0.41
HOXC6-201ENST00000243108 RASL10AQ92737 203 aa12.5□□□□□ -0.41
HOXC6-201ENST00000243108 MAP1LC3CQ9BXW4 147 aa12.5□□□□□ -0.41
HOXC6-201ENST00000243108 EPPK1P58107 5090 aaKnown RBP12.5□□□□□ -0.41
HOXC6-201ENST00000243108 PET117Q6UWS5 81 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 111.5 ms