RNA–Protein interactions for RNA: ENST00000226091.2

EFNB3-201, Transcript of ephrin B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EFNB3, Length 3,222 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB3-201ENST00000226091 ASIPP42127 132 aa12.5□□□□□ -0.41
EFNB3-201ENST00000226091 IGKCP01834 107 aa12.5□□□□□ -0.41
EFNB3-201ENST00000226091 KRTAP10-9P60411 292 aa12.5□□□□□ -0.41
EFNB3-201ENST00000226091 SRSF2Q01130 221 aaKnown RBP12.5□□□□□ -0.41
EFNB3-201ENST00000226091 ZNF418Q8TF45 676 aaPredicted RBP12.5□□□□□ -0.41
EFNB3-201ENST00000226091 C18orf65Q6ZTR6 163 aa12.5□□□□□ -0.41
EFNB3-201ENST00000226091 MRAP2Q96G30 205 aa12.5□□□□□ -0.41
EFNB3-201ENST00000226091 SCGB3A1Q96QR1 104 aa12.5□□□□□ -0.41
EFNB3-201ENST00000226091 IGHV3-64A0A075B6Q5 118 aa12.49□□□□□ -0.41
EFNB3-201ENST00000226091 LAGE3Q14657 143 aa12.49□□□□□ -0.41
EFNB3-201ENST00000226091 RNF183Q96D59 192 aa12.49□□□□□ -0.41
EFNB3-201ENST00000226091 GCN1Q92616 2671 aaKnown RBP12.49□□□□□ -0.41
EFNB3-201ENST00000226091 IGLV2-18A0A075B6J9 118 aa12.49□□□□□ -0.41
EFNB3-201ENST00000226091 APOMO95445 188 aa12.49□□□□□ -0.41
EFNB3-201ENST00000226091 GAGE13Q4V321 117 aa12.49□□□□□ -0.41
EFNB3-201ENST00000226091 FAM159AQ6UWV7 190 aa12.49□□□□□ -0.41
EFNB3-201ENST00000226091 ZFAND2AQ8N6M9 145 aa12.49□□□□□ -0.41
EFNB3-201ENST00000226091 CHAC1Q9BUX1 264 aa12.49□□□□□ -0.41
EFNB3-201ENST00000226091 SIVA1O15304 175 aa12.49□□□□□ -0.41
EFNB3-201ENST00000226091 ZMAT4Q9H898 229 aa12.49□□□□□ -0.41
EFNB3-201ENST00000226091 RBAKDNA6NC62 111 aa12.48□□□□□ -0.41
EFNB3-201ENST00000226091 KNCNA6PVL3 124 aa12.48□□□□□ -0.41
EFNB3-201ENST00000226091 MT-ATP8P03928 68 aa12.48□□□□□ -0.41
EFNB3-201ENST00000226091 Q8N8P6 123 aa12.48□□□□□ -0.41
EFNB3-201ENST00000226091 LINC01546A6NGU7 62 aa12.48□□□□□ -0.41
EFNB3-201ENST00000226091 B5MCH6 92 aa12.48□□□□□ -0.41
EFNB3-201ENST00000226091 C9orf139Q6ZV77 190 aa12.48□□□□□ -0.41
EFNB3-201ENST00000226091 TRAV21A0A0B4J279 112 aa12.47□□□□□ -0.41
EFNB3-201ENST00000226091 A0A1W2PRX2 142 aa12.47□□□□□ -0.41
EFNB3-201ENST00000226091 RPL39P62891 51 aaKnown RBP12.47□□□□□ -0.41
EFNB3-201ENST00000226091 MAPKAPK5-AS1Q8N8E1 139 aa12.47□□□□□ -0.41
EFNB3-201ENST00000226091 NRACQ8N912 160 aa12.47□□□□□ -0.41
EFNB3-201ENST00000226091 DAZ1Q9NQZ3 744 aaKnown RBP12.47□□□□□ -0.41
EFNB3-201ENST00000226091 PTH2Q96A98 100 aa12.47□□□□□ -0.41
EFNB3-201ENST00000226091 SCGB1A1P11684 91 aa12.47□□□□□ -0.41
EFNB3-201ENST00000226091 LOC107984156A0A0G2JMH3 177 aa12.46□□□□□ -0.41
EFNB3-201ENST00000226091 FAM223BA6NKX1 122 aa12.46□□□□□ -0.41
EFNB3-201ENST00000226091 ARL17AQ8IVW1 177 aa12.46□□□□□ -0.41
EFNB3-201ENST00000226091 FAM223AQ8IWN6 122 aa12.46□□□□□ -0.41
EFNB3-201ENST00000226091 OPRPNQ99935 248 aaPredicted RBP12.46□□□□□ -0.41
EFNB3-201ENST00000226091 MDFICQ9P1T7 246 aa12.46□□□□□ -0.41
EFNB3-201ENST00000226091 TRBV25-1A0A075B6N4 114 aa12.46□□□□□ -0.42
EFNB3-201ENST00000226091 IGHV3OR16-12A0A075B7B8 117 aa12.46□□□□□ -0.42
EFNB3-201ENST00000226091 C9orf47Q6ZRZ4 202 aa12.46□□□□□ -0.42
EFNB3-201ENST00000226091 HIST1H4GQ99525 98 aa12.46□□□□□ -0.42
EFNB3-201ENST00000226091 B4DSR2 109 aa12.45□□□□□ -0.42
EFNB3-201ENST00000226091 NDUFA4O00483 81 aa12.45□□□□□ -0.42
EFNB3-201ENST00000226091 DPM2O94777 84 aa12.45□□□□□ -0.42
EFNB3-201ENST00000226091 IGHG2P01859 326 aa12.45□□□□□ -0.42
EFNB3-201ENST00000226091 ZNF56Q15929 161 aa12.45□□□□□ -0.42
EFNB3-201ENST00000226091 KLHL30-AS1Q8NEE0 82 aa12.45□□□□□ -0.42
EFNB3-201ENST00000226091 CYSLTR1Q9Y271 337 aa12.45□□□□□ -0.42
EFNB3-201ENST00000226091 SUMO2P61956 95 aaKnown RBP12.45□□□□□ -0.42
EFNB3-201ENST00000226091 MRPL16Q9NX20 251 aaKnown RBP12.45□□□□□ -0.42
EFNB3-201ENST00000226091 SRSF1Q07955 248 aaKnown RBP eCLIP12.44□□□□□ -0.42
EFNB3-201ENST00000226091 CFAP161Q6P656 301 aa12.44□□□□□ -0.42
EFNB3-201ENST00000226091 RASL10AQ92737 203 aa12.44□□□□□ -0.42
EFNB3-201ENST00000226091 ANAPC13Q9BS18 74 aa12.44□□□□□ -0.42
EFNB3-201ENST00000226091 A6NDX4 124 aa12.43□□□□□ -0.42
EFNB3-201ENST00000226091 IGLL5B9A064 214 aa12.43□□□□□ -0.42
EFNB3-201ENST00000226091 DUSP14O95147 198 aaKnown RBP12.43□□□□□ -0.42
EFNB3-201ENST00000226091 RNASE13Q5GAN3 156 aaKnown RBP12.43□□□□□ -0.42
EFNB3-201ENST00000226091 SHISA2Q6UWI4 295 aa12.43□□□□□ -0.42
EFNB3-201ENST00000226091 FOXI2Q6ZQN5 318 aa12.43□□□□□ -0.42
EFNB3-201ENST00000226091 BBC3Q96PG8 261 aaPredicted RBP12.43□□□□□ -0.42
EFNB3-201ENST00000226091 C2orf66Q6UXQ4 117 aa12.43□□□□□ -0.42
EFNB3-201ENST00000226091 SCGB1D4Q6XE38 83 aa12.43□□□□□ -0.42
EFNB3-201ENST00000226091 SMIM2Q9BVW6 85 aa12.43□□□□□ -0.42
EFNB3-201ENST00000226091 F8W1H4 67 aa12.42□□□□□ -0.42
EFNB3-201ENST00000226091 HOXA3O43365 443 aaPredicted RBP12.42□□□□□ -0.42
EFNB3-201ENST00000226091 U3KQE9 123 aa12.42□□□□□ -0.42
EFNB3-201ENST00000226091 AKAP9Q99996 3911 aa12.42□□□□□ -0.42
EFNB3-201ENST00000226091 ATP5LO75964 103 aa12.42□□□□□ -0.42
EFNB3-201ENST00000226091 RNASE3P12724 160 aaKnown RBP12.41□□□□□ -0.42
EFNB3-201ENST00000226091 SLURP1P55000 103 aa12.41□□□□□ -0.42
EFNB3-201ENST00000226091 SETXQ7Z333 2677 aaKnown RBP12.41□□□□□ -0.42
EFNB3-201ENST00000226091 DPH3P1Q9H4G8 78 aa12.41□□□□□ -0.42
EFNB3-201ENST00000226091 IGHV4OR15-8A0A075B7B6 117 aa12.4□□□□□ -0.42
EFNB3-201ENST00000226091 A0A087WW49 117 aa12.4□□□□□ -0.42
EFNB3-201ENST00000226091 OVOL1O14753 267 aa12.4□□□□□ -0.42
EFNB3-201ENST00000226091 P0DMU3 169 aa12.4□□□□□ -0.42
EFNB3-201ENST00000226091 FAM231AP0DMU4 169 aa12.4□□□□□ -0.42
EFNB3-201ENST00000226091 FAM231CP0DMU5 169 aa12.4□□□□□ -0.42
EFNB3-201ENST00000226091 KLK9Q2XQG4 91 aa12.4□□□□□ -0.42
EFNB3-201ENST00000226091 SPATA25Q9BR10 227 aa12.4□□□□□ -0.42
EFNB3-201ENST00000226091 TRBV20-1A0A075B6N2 111 aa12.4□□□□□ -0.42
EFNB3-201ENST00000226091 PSMB2P49721 201 aa12.4□□□□□ -0.42
EFNB3-201ENST00000226091 TMEM170BQ5T4T1 132 aa12.4□□□□□ -0.42
EFNB3-201ENST00000226091 PRSS29PA6NIE9 313 aa12.39□□□□□ -0.43
EFNB3-201ENST00000226091 SMIM20Q8N5G0 67 aa12.39□□□□□ -0.43
EFNB3-201ENST00000226091 USMG5Q96IX5 58 aa12.39□□□□□ -0.43
EFNB3-201ENST00000226091 HIGD1BQ9P298 99 aa12.39□□□□□ -0.43
EFNB3-201ENST00000226091 HERV-K104P63124 156 aa12.39□□□□□ -0.43
EFNB3-201ENST00000226091 TP53TG1Q9Y2A0 90 aa12.39□□□□□ -0.43
EFNB3-201ENST00000226091 TENM4Q6N022 2769 aa12.39□□□□□ -0.43
EFNB3-201ENST00000226091 XGP55808 180 aa12.39□□□□□ -0.43
EFNB3-201ENST00000226091 PROK1P58294 105 aa12.39□□□□□ -0.43
EFNB3-201ENST00000226091 A0A087WX48 190 aa12.38□□□□□ -0.43
EFNB3-201ENST00000226091 C12orf74Q32Q52 190 aa12.38□□□□□ -0.43
EFNB3-201ENST00000226091 CEND1Q8N111 149 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms