RNA–Protein interactions for RNA: ENST00000222402.7

UBE2D4-201, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE2D4, Length 3,974 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-201ENST00000222402 VCX2Q9H322 139 aa11.31□□□□□ -0.6
UBE2D4-201ENST00000222402 HOXA3O43365 443 aaPredicted RBP11.3□□□□□ -0.6
UBE2D4-201ENST00000222402 DEFB136Q30KP8 78 aa11.3□□□□□ -0.6
UBE2D4-201ENST00000222402 KNCNA6PVL3 124 aa11.3□□□□□ -0.6
UBE2D4-201ENST00000222402 LYRM7Q5U5X0 104 aa11.3□□□□□ -0.6
UBE2D4-201ENST00000222402 MYMXA0A1B0GTQ4 84 aa11.3□□□□□ -0.6
UBE2D4-201ENST00000222402 AVPP01185 164 aa11.3□□□□□ -0.6
UBE2D4-201ENST00000222402 HOXD3P31249 432 aaPredicted RBP11.29□□□□□ -0.6
UBE2D4-201ENST00000222402 SUMO4Q6EEV6 95 aa11.29□□□□□ -0.6
UBE2D4-201ENST00000222402 FGF6P10767 208 aa11.28□□□□□ -0.6
UBE2D4-201ENST00000222402 EDN2P20800 178 aa11.28□□□□□ -0.6
UBE2D4-201ENST00000222402 PEMTQ9UBM1 199 aa11.28□□□□□ -0.6
UBE2D4-201ENST00000222402 MTURNQ8N3F0 131 aa11.28□□□□□ -0.6
UBE2D4-201ENST00000222402 K7EMT4 169 aa11.28□□□□□ -0.6
UBE2D4-201ENST00000222402 RPL39P62891 51 aaKnown RBP11.28□□□□□ -0.6
UBE2D4-201ENST00000222402 PMVKQ15126 192 aa11.28□□□□□ -0.6
UBE2D4-201ENST00000222402 GPHB5Q86YW7 130 aa11.28□□□□□ -0.6
UBE2D4-201ENST00000222402 VPREB3Q9UKI3 123 aa11.28□□□□□ -0.6
UBE2D4-201ENST00000222402 SMG1Q96Q15 3661 aaKnown RBP11.28□□□□□ -0.6
UBE2D4-201ENST00000222402 A0A1B0GWB2 263 aa11.27□□□□□ -0.6
UBE2D4-201ENST00000222402 LINC01549A6NIU2 74 aa11.27□□□□□ -0.6
UBE2D4-201ENST00000222402 TOMM6Q96B49 74 aa11.27□□□□□ -0.61
UBE2D4-201ENST00000222402 Q8N1Y9 231 aa11.26□□□□□ -0.61
UBE2D4-201ENST00000222402 ZNF418Q8TF45 676 aaPredicted RBP11.26□□□□□ -0.61
UBE2D4-201ENST00000222402 PGPEP1Q9NXJ5 209 aa11.26□□□□□ -0.61
UBE2D4-201ENST00000222402 MDFICQ9P1T7 246 aa11.26□□□□□ -0.61
UBE2D4-201ENST00000222402 IGHV4OR15-8A0A075B7B6 117 aa11.26□□□□□ -0.61
UBE2D4-201ENST00000222402 A0A087WW49 117 aa11.26□□□□□ -0.61
UBE2D4-201ENST00000222402 SAP30O75446 220 aa11.26□□□□□ -0.61
UBE2D4-201ENST00000222402 CD28P10747 220 aa11.26□□□□□ -0.61
UBE2D4-201ENST00000222402 BAALCQ8WXS3 180 aa11.26□□□□□ -0.61
UBE2D4-201ENST00000222402 HIGD1BQ9P298 99 aa11.26□□□□□ -0.61
UBE2D4-201ENST00000222402 EPG5Q9HCE0 2579 aa11.26□□□□□ -0.61
UBE2D4-201ENST00000222402 RELNP78509 3460 aa11.26□□□□□ -0.61
UBE2D4-201ENST00000222402 ELANEP08246 267 aa11.26□□□□□ -0.61
UBE2D4-201ENST00000222402 ADAMTSL5Q6ZMM2 481 aa11.26□□□□□ -0.61
UBE2D4-201ENST00000222402 LGALS1P09382 135 aaKnown RBP11.26□□□□□ -0.61
UBE2D4-201ENST00000222402 Q5PR19 223 aa11.26□□□□□ -0.61
UBE2D4-201ENST00000222402 TRPT1Q86TN4 253 aaKnown RBP11.26□□□□□ -0.61
UBE2D4-201ENST00000222402 KLHL30-AS1Q8NEE0 82 aa11.26□□□□□ -0.61
UBE2D4-201ENST00000222402 ABCA2Q9BZC7 2435 aa11.25□□□□□ -0.61
UBE2D4-201ENST00000222402 J3QLI3 93 aa11.25□□□□□ -0.61
UBE2D4-201ENST00000222402 RNASE3P12724 160 aaKnown RBP11.25□□□□□ -0.61
UBE2D4-201ENST00000222402 C12orf74Q32Q52 190 aa11.25□□□□□ -0.61
UBE2D4-201ENST00000222402 AMTNQ6UX39 209 aa11.25□□□□□ -0.61
UBE2D4-201ENST00000222402 ZFP2Q6ZN57 461 aa11.25□□□□□ -0.61
UBE2D4-201ENST00000222402 MED14OSP0DP75 135 aa11.25□□□□□ -0.61
UBE2D4-201ENST00000222402 MAPKAPK5-AS1Q8N8E1 139 aa11.25□□□□□ -0.61
UBE2D4-201ENST00000222402 HHLA3Q9XRX5 114 aa11.25□□□□□ -0.61
UBE2D4-201ENST00000222402 TRAV12-1A0A0B4J245 112 aa11.24□□□□□ -0.61
UBE2D4-201ENST00000222402 SLURP1P55000 103 aa11.24□□□□□ -0.61
UBE2D4-201ENST00000222402 IGHV4-4A0A075B6R2 117 aa11.24□□□□□ -0.61
UBE2D4-201ENST00000222402 TRAV2A0A0B4J234 112 aa11.24□□□□□ -0.61
UBE2D4-201ENST00000222402 GEMIN7Q9H840 131 aaKnown RBP11.24□□□□□ -0.61
UBE2D4-201ENST00000222402 AGRNO00468 2067 aa11.24□□□□□ -0.61
UBE2D4-201ENST00000222402 PRRC2AP48634 2157 aaKnown RBP11.24□□□□□ -0.61
UBE2D4-201ENST00000222402 MTORP42345 2549 aa11.24□□□□□ -0.61
UBE2D4-201ENST00000222402 GAGE13Q4V321 117 aa11.23□□□□□ -0.61
UBE2D4-201ENST00000222402 PSMG3-AS1Q96PY0 264 aa11.23□□□□□ -0.61
UBE2D4-201ENST00000222402 A0A0J9YX75 114 aa11.23□□□□□ -0.61
UBE2D4-201ENST00000222402 CRIP2P52943 208 aaPredicted RBP11.23□□□□□ -0.61
UBE2D4-201ENST00000222402 TMEM141Q96I45 108 aa11.23□□□□□ -0.61
UBE2D4-201ENST00000222402 H3BMG7 143 aa11.23□□□□□ -0.61
UBE2D4-201ENST00000222402 IGLV1-40P01703 118 aa11.23□□□□□ -0.61
UBE2D4-201ENST00000222402 Q96MF0 132 aa11.23□□□□□ -0.61
UBE2D4-201ENST00000222402 TAL2Q16559 108 aa11.22□□□□□ -0.61
UBE2D4-201ENST00000222402 TRBV7-9A0A0J9YWB2 115 aa11.22□□□□□ -0.61
UBE2D4-201ENST00000222402 IGLV2-18A0A075B6J9 118 aa11.21□□□□□ -0.61
UBE2D4-201ENST00000222402 FOXI2Q6ZQN5 318 aa11.21□□□□□ -0.61
UBE2D4-201ENST00000222402 PHLDA1Q8WV24 401 aaPredicted RBP11.21□□□□□ -0.61
UBE2D4-201ENST00000222402 COL12A1Q99715 3063 aa11.21□□□□□ -0.61
UBE2D4-201ENST00000222402 STHQ8IWL8 128 aa11.21□□□□□ -0.61
UBE2D4-201ENST00000222402 UBE2E2Q96LR5 201 aa11.21□□□□□ -0.61
UBE2D4-201ENST00000222402 C11orf86A6NJI1 115 aa11.21□□□□□ -0.62
UBE2D4-201ENST00000222402 LINC01619G3V211 115 aa11.21□□□□□ -0.62
UBE2D4-201ENST00000222402 PSMB8P28062 276 aa11.21□□□□□ -0.62
UBE2D4-201ENST00000222402 SPXQ9BT56 116 aa11.21□□□□□ -0.62
UBE2D4-201ENST00000222402 I3L3M4 83 aa11.2□□□□□ -0.62
UBE2D4-201ENST00000222402 ZNF415Q09FC8 603 aa11.2□□□□□ -0.62
UBE2D4-201ENST00000222402 ETDBQ3ZM63 59 aa11.2□□□□□ -0.62
UBE2D4-201ENST00000222402 IGHV3-16A0A0C4DH30 117 aa11.2□□□□□ -0.62
UBE2D4-201ENST00000222402 IGLL5B9A064 214 aa11.2□□□□□ -0.62
UBE2D4-201ENST00000222402 SOCS3O14543 225 aa11.2□□□□□ -0.62
UBE2D4-201ENST00000222402 XCL2Q9UBD3 114 aa11.2□□□□□ -0.62
UBE2D4-201ENST00000222402 NEXN-AS1Q8NBZ9 246 aa11.2□□□□□ -0.62
UBE2D4-201ENST00000222402 RBX1P62877 108 aa11.19□□□□□ -0.62
UBE2D4-201ENST00000222402 DCANP1Q8TF63 244 aa11.19□□□□□ -0.62
UBE2D4-201ENST00000222402 E9PLD3 99 aa11.19□□□□□ -0.62
UBE2D4-201ENST00000222402 RNASE13Q5GAN3 156 aaKnown RBP11.19□□□□□ -0.62
UBE2D4-201ENST00000222402 OPRPNQ99935 248 aaPredicted RBP11.19□□□□□ -0.62
UBE2D4-201ENST00000222402 K7EQG2 157 aa11.18□□□□□ -0.62
UBE2D4-201ENST00000222402 KLLNB2CW77 178 aa11.18□□□□□ -0.62
UBE2D4-201ENST00000222402 J3QQQ9 107 aa11.18□□□□□ -0.62
UBE2D4-201ENST00000222402 ASH1LQ9NR48 2969 aaKnown RBP11.18□□□□□ -0.62
UBE2D4-201ENST00000222402 IGHV3-38A0A0C4DH36 116 aa11.18□□□□□ -0.62
UBE2D4-201ENST00000222402 APRG1Q8IVJ8 170 aa11.18□□□□□ -0.62
UBE2D4-201ENST00000222402 ZMAT4Q9H898 229 aa11.17□□□□□ -0.62
UBE2D4-201ENST00000222402 IGHV3-53P01767 116 aa11.17□□□□□ -0.62
UBE2D4-201ENST00000222402 RRN3P1Q2M238 152 aa11.17□□□□□ -0.62
UBE2D4-201ENST00000222402 TRGV1A0A0A0MS02 117 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 90.5 ms