RNA–Protein interactions for RNA: ENST00000220429.12

GABPB1-201, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 2,726 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-201ENST00000220429 C2orf82Q6UX34 121 aa10.41□□□□□ -0.74
GABPB1-201ENST00000220429 LINC00477Q96M19 166 aa10.41□□□□□ -0.74
GABPB1-201ENST00000220429 PRR25Q96S07 402 aa10.41□□□□□ -0.74
GABPB1-201ENST00000220429 A0A1W2PPR1 153 aa10.4□□□□□ -0.74
GABPB1-201ENST00000220429 OXTP01178 125 aa10.4□□□□□ -0.74
GABPB1-201ENST00000220429 IGHV3-33P01772 117 aa10.4□□□□□ -0.74
GABPB1-201ENST00000220429 PRB4P10163 310 aaPredicted RBP10.4□□□□□ -0.74
GABPB1-201ENST00000220429 KLHL30-AS1Q8NEE0 82 aa10.4□□□□□ -0.74
GABPB1-201ENST00000220429 AKAP6Q13023 2319 aa10.4□□□□□ -0.75
GABPB1-201ENST00000220429 ELANEP08246 267 aa10.4□□□□□ -0.75
GABPB1-201ENST00000220429 ZNF22P17026 224 aaPredicted RBP10.4□□□□□ -0.75
GABPB1-201ENST00000220429 HERVK_113P61574 105 aa10.4□□□□□ -0.75
GABPB1-201ENST00000220429 MSRB1Q9NZV6 116 aa10.4□□□□□ -0.75
GABPB1-201ENST00000220429 hADV29S1A0JD25 119 aa10.39□□□□□ -0.75
GABPB1-201ENST00000220429 H7C2G1 150 aa10.39□□□□□ -0.75
GABPB1-201ENST00000220429 SH2D1AO60880 128 aa10.39□□□□□ -0.75
GABPB1-201ENST00000220429 TMEM170BQ5T4T1 132 aa10.39□□□□□ -0.75
GABPB1-201ENST00000220429 RNF5Q99942 180 aa10.39□□□□□ -0.75
GABPB1-201ENST00000220429 C2orf48Q96LS8 159 aa10.39□□□□□ -0.75
GABPB1-201ENST00000220429 PRO0628Q9UI54 55 aa10.39□□□□□ -0.75
GABPB1-201ENST00000220429 TMEM258P61165 79 aa10.38□□□□□ -0.75
GABPB1-201ENST00000220429 DPM3Q9P2X0 92 aa10.38□□□□□ -0.75
GABPB1-201ENST00000220429 MALP21145 153 aa10.38□□□□□ -0.75
GABPB1-201ENST00000220429 PLGLAQ15195 96 aa10.38□□□□□ -0.75
GABPB1-201ENST00000220429 JPT2Q9H910 190 aa10.38□□□□□ -0.75
GABPB1-201ENST00000220429 DEFB121Q5J5C9 76 aa10.37□□□□□ -0.75
GABPB1-201ENST00000220429 ODF3BA8MYP8 253 aa10.37□□□□□ -0.75
GABPB1-201ENST00000220429 M0R1W7 72 aa10.37□□□□□ -0.75
GABPB1-201ENST00000220429 SEC61GP60059 68 aa10.37□□□□□ -0.75
GABPB1-201ENST00000220429 Q6ZS46 218 aa10.37□□□□□ -0.75
GABPB1-201ENST00000220429 VPS13CQ709C8 3753 aa10.37□□□□□ -0.75
GABPB1-201ENST00000220429 SLC25A29Q8N8R3 303 aa10.36□□□□□ -0.75
GABPB1-201ENST00000220429 METTL26Q96S19 204 aa10.36□□□□□ -0.75
GABPB1-201ENST00000220429 C1orf43Q9BWL3 253 aa10.36□□□□□ -0.75
GABPB1-201ENST00000220429 TMEM14CQ9P0S9 112 aa10.36□□□□□ -0.75
GABPB1-201ENST00000220429 TINCRA0A1B0GVN0 87 aa10.36□□□□□ -0.75
GABPB1-201ENST00000220429 I3L2K1 104 aa10.36□□□□□ -0.75
GABPB1-201ENST00000220429 NEXN-AS1Q8NBZ9 246 aa10.36□□□□□ -0.75
GABPB1-201ENST00000220429 Q1RN00 199 aa10.35□□□□□ -0.75
GABPB1-201ENST00000220429 TMEM263Q8WUH6 116 aaKnown RBP10.35□□□□□ -0.75
GABPB1-201ENST00000220429 DSCR8Q96T75 97 aa10.35□□□□□ -0.75
GABPB1-201ENST00000220429 CYSTM1Q9H1C7 97 aa10.35□□□□□ -0.75
GABPB1-201ENST00000220429 PRORYQ9H606 182 aa10.35□□□□□ -0.75
GABPB1-201ENST00000220429 H3BT86 120 aa10.35□□□□□ -0.75
GABPB1-201ENST00000220429 H7C423 109 aa10.35□□□□□ -0.75
GABPB1-201ENST00000220429 NBR2O15453 112 aa10.35□□□□□ -0.75
GABPB1-201ENST00000220429 ZFHX3Q15911 3703 aa10.35□□□□□ -0.75
GABPB1-201ENST00000220429 TRAV41A0A0B4J266 112 aa10.35□□□□□ -0.75
GABPB1-201ENST00000220429 EGR2P11161 476 aaPredicted RBP10.35□□□□□ -0.75
GABPB1-201ENST00000220429 SCGB3A1Q96QR1 104 aa10.35□□□□□ -0.75
GABPB1-201ENST00000220429 EIF4EBP3O60516 100 aaPredicted RBP10.34□□□□□ -0.75
GABPB1-201ENST00000220429 ACYP1P07311 99 aa10.34□□□□□ -0.75
GABPB1-201ENST00000220429 ZFP36P26651 326 aaKnown RBP10.34□□□□□ -0.75
GABPB1-201ENST00000220429 SIGLEC15Q6ZMC9 328 aa10.34□□□□□ -0.75
GABPB1-201ENST00000220429 NPBQ8NG41 125 aa10.34□□□□□ -0.75
GABPB1-201ENST00000220429 FAM19A4Q96LR4 140 aa10.34□□□□□ -0.75
GABPB1-201ENST00000220429 BEX4Q9NWD9 120 aaPredicted RBP10.34□□□□□ -0.75
GABPB1-201ENST00000220429 PYGO1Q9Y3Y4 419 aa10.34□□□□□ -0.75
GABPB1-201ENST00000220429 TRBV19A0A075B6N1 114 aa10.34□□□□□ -0.75
GABPB1-201ENST00000220429 VMO1Q7Z5L0 202 aa10.34□□□□□ -0.75
GABPB1-201ENST00000220429 DYNAPQ8N1N2 210 aa10.34□□□□□ -0.75
GABPB1-201ENST00000220429 C17orf77Q96MU5 243 aa10.34□□□□□ -0.75
GABPB1-201ENST00000220429 LINC00643Q86TS7 51 aa10.33□□□□□ -0.76
GABPB1-201ENST00000220429 PKD1L2Q7Z442 2459 aa10.33□□□□□ -0.76
GABPB1-201ENST00000220429 A0A0B4J2C4 111 aa10.33□□□□□ -0.76
GABPB1-201ENST00000220429 K7EIM0 57 aa10.33□□□□□ -0.76
GABPB1-201ENST00000220429 IGKV1-17P01599 117 aa10.32□□□□□ -0.76
GABPB1-201ENST00000220429 CNFNQ9BYD5 112 aa10.32□□□□□ -0.76
GABPB1-201ENST00000220429 KLK15Q9H2R5 256 aa10.32□□□□□ -0.76
GABPB1-201ENST00000220429 LYZP61626 148 aa10.32□□□□□ -0.76
GABPB1-201ENST00000220429 ITLN2Q8WWU7 325 aaPredicted RBP10.32□□□□□ -0.76
GABPB1-201ENST00000220429 SPTAN1Q13813 2472 aaKnown RBP10.32□□□□□ -0.76
GABPB1-201ENST00000220429 PIEZO1Q92508 2521 aa10.31□□□□□ -0.76
GABPB1-201ENST00000220429 TRBV30A0A0K0K1B3 111 aa10.31□□□□□ -0.76
GABPB1-201ENST00000220429 M0R3E3 92 aa10.31□□□□□ -0.76
GABPB1-201ENST00000220429 RPL35AP18077 110 aaKnown RBP10.31□□□□□ -0.76
GABPB1-201ENST00000220429 EDN2P20800 178 aa10.31□□□□□ -0.76
GABPB1-201ENST00000220429 IL17RELQ6ZVW7 336 aa10.31□□□□□ -0.76
GABPB1-201ENST00000220429 ATOX1O00244 68 aa10.31□□□□□ -0.76
GABPB1-201ENST00000220429 LYPD1Q8N2G4 141 aa10.31□□□□□ -0.76
GABPB1-201ENST00000220429 NRACQ8N912 160 aa10.31□□□□□ -0.76
GABPB1-201ENST00000220429 TRAV13-1A0A0B4J241 112 aa10.3□□□□□ -0.76
GABPB1-201ENST00000220429 TRIAP1O43715 76 aa10.3□□□□□ -0.76
GABPB1-201ENST00000220429 CXCL5P42830 114 aa10.3□□□□□ -0.76
GABPB1-201ENST00000220429 C5orf38Q86SI9 138 aa10.3□□□□□ -0.76
GABPB1-201ENST00000220429 RNF152Q8N8N0 203 aa10.3□□□□□ -0.76
GABPB1-201ENST00000220429 SMCR5Q8TEV8 140 aa10.3□□□□□ -0.76
GABPB1-201ENST00000220429 COL12A1Q99715 3063 aa10.3□□□□□ -0.76
GABPB1-201ENST00000220429 C19orf84I3L1E1 186 aa10.3□□□□□ -0.76
GABPB1-201ENST00000220429 NDPQ00604 133 aa10.29□□□□□ -0.76
GABPB1-201ENST00000220429 ZNF575Q86XF7 245 aa10.29□□□□□ -0.76
GABPB1-201ENST00000220429 TOMM6Q96B49 74 aa10.29□□□□□ -0.76
GABPB1-201ENST00000220429 SIRPDQ9H106 197 aa10.29□□□□□ -0.76
GABPB1-201ENST00000220429 PKIGQ9Y2B9 76 aa10.29□□□□□ -0.76
GABPB1-201ENST00000220429 CACNA1BQ00975 2339 aa10.29□□□□□ -0.76
GABPB1-201ENST00000220429 GNLYP22749 145 aa10.29□□□□□ -0.76
GABPB1-201ENST00000220429 LINC00336Q6ZUF6 198 aa10.29□□□□□ -0.76
GABPB1-201ENST00000220429 Q8N6K4 173 aa10.29□□□□□ -0.76
GABPB1-201ENST00000220429 CFAP46Q8IYW2 2715 aa10.29□□□□□ -0.76
GABPB1-201ENST00000220429 RS1O15537 224 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 139.1 ms