RNA–Protein interactions for RNA: ENST00000641074.1

PHGDH-209, Transcript of phosphoglycerate dehydrogenase, humanhuman

BASIC

Gene PHGDH, Length 1,780 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-209ENST00000641074 AKR1D1P51857 326 aa13.37□□□□□ -0.27
PHGDH-209ENST00000641074 LINC00310P59036 64 aa13.37□□□□□ -0.27
PHGDH-209ENST00000641074 Q8N1Y9 231 aa13.37□□□□□ -0.27
PHGDH-209ENST00000641074 C18orf32Q8TCD1 76 aa13.37□□□□□ -0.27
PHGDH-209ENST00000641074 PHLDA3Q9Y5J5 127 aa13.37□□□□□ -0.27
PHGDH-209ENST00000641074 IGHV3-16A0A0C4DH30 117 aa13.37□□□□□ -0.27
PHGDH-209ENST00000641074 IQCJQ1A5X6 159 aa13.37□□□□□ -0.27
PHGDH-209ENST00000641074 DMRTA1Q5VZB9 504 aa13.37□□□□□ -0.27
PHGDH-209ENST00000641074 WFDC9Q8NEX5 89 aa13.37□□□□□ -0.27
PHGDH-209ENST00000641074 MDFICQ9P1T7 246 aa13.37□□□□□ -0.27
PHGDH-209ENST00000641074 M0R381 172 aa13.36□□□□□ -0.27
PHGDH-209ENST00000641074 EVI2AP22794 236 aa13.36□□□□□ -0.27
PHGDH-209ENST00000641074 NOTCH3Q9UM47 2321 aa13.35□□□□□ -0.27
PHGDH-209ENST00000641074 SERF1AO75920 110 aa13.35□□□□□ -0.27
PHGDH-209ENST00000641074 S100A2P29034 98 aa13.35□□□□□ -0.27
PHGDH-209ENST00000641074 MRPL51Q4U2R6 128 aaKnown RBP13.35□□□□□ -0.27
PHGDH-209ENST00000641074 RNF185Q96GF1 192 aa13.35□□□□□ -0.27
PHGDH-209ENST00000641074 RCHY1Q96PM5 261 aa13.35□□□□□ -0.27
PHGDH-209ENST00000641074 XCL2Q9UBD3 114 aa13.35□□□□□ -0.27
PHGDH-209ENST00000641074 TRRAPQ9Y4A5 3859 aa13.35□□□□□ -0.27
PHGDH-209ENST00000641074 INSP01308 110 aa13.35□□□□□ -0.27
PHGDH-209ENST00000641074 C3orf56Q8N813 242 aa13.35□□□□□ -0.27
PHGDH-209ENST00000641074 AMBPP02760 352 aa13.34□□□□□ -0.27
PHGDH-209ENST00000641074 RAB4AP20338 218 aa13.34□□□□□ -0.27
PHGDH-209ENST00000641074 C9orf85Q96MD7 179 aa13.34□□□□□ -0.27
PHGDH-209ENST00000641074 HIST1H2BLQ99880 126 aa13.34□□□□□ -0.27
PHGDH-209ENST00000641074 MCRIP2Q9BUT9 160 aaKnown RBP13.34□□□□□ -0.27
PHGDH-209ENST00000641074 CBY3A6NI87 242 aa13.33□□□□□ -0.28
PHGDH-209ENST00000641074 D6R8Y8 96 aa13.33□□□□□ -0.28
PHGDH-209ENST00000641074 FABP4P15090 132 aa13.33□□□□□ -0.28
PHGDH-209ENST00000641074 HTN1P15515 57 aa13.33□□□□□ -0.28
PHGDH-209ENST00000641074 NUTF2P61970 127 aaKnown RBP13.33□□□□□ -0.28
PHGDH-209ENST00000641074 SMIM15Q7Z3B0 74 aa13.33□□□□□ -0.28
PHGDH-209ENST00000641074 U3KQK5 164 aa13.33□□□□□ -0.28
PHGDH-209ENST00000641074 MUC4Q99102 2169 aa13.33□□□□□ -0.28
PHGDH-209ENST00000641074 TRGV11A0A075B6L2 103 aa13.32□□□□□ -0.28
PHGDH-209ENST00000641074 NXPH4O95158 308 aa13.32□□□□□ -0.28
PHGDH-209ENST00000641074 IGLL1P15814 213 aa13.32□□□□□ -0.28
PHGDH-209ENST00000641074 DEFB125Q8N687 156 aa13.32□□□□□ -0.28
PHGDH-209ENST00000641074 C20orf144Q9BQM9 153 aa13.32□□□□□ -0.28
PHGDH-209ENST00000641074 PRM2P04554 102 aa13.32□□□□□ -0.28
PHGDH-209ENST00000641074 ESDP10768 282 aa13.32□□□□□ -0.28
PHGDH-209ENST00000641074 RPL35AP18077 110 aaKnown RBP13.32□□□□□ -0.28
PHGDH-209ENST00000641074 LINC01587Q99440 93 aa13.32□□□□□ -0.28
PHGDH-209ENST00000641074 SMKR1H3BMG3 65 aa13.31□□□□□ -0.28
PHGDH-209ENST00000641074 SHISA2Q6UWI4 295 aa13.31□□□□□ -0.28
PHGDH-209ENST00000641074 C12orf54Q6X4T0 127 aa13.31□□□□□ -0.28
PHGDH-209ENST00000641074 GTSCR1Q86UQ5 136 aa13.31□□□□□ -0.28
PHGDH-209ENST00000641074 ORMDL3Q8N138 153 aa13.31□□□□□ -0.28
PHGDH-209ENST00000641074 GIG44P09565 113 aaPredicted RBP13.3□□□□□ -0.28
PHGDH-209ENST00000641074 CKS2P33552 79 aa13.3□□□□□ -0.28
PHGDH-209ENST00000641074 C1orf158Q8N1D5 194 aa13.3□□□□□ -0.28
PHGDH-209ENST00000641074 PRELID3AQ96N28 172 aa13.3□□□□□ -0.28
PHGDH-209ENST00000641074 LINC00467Q9BRT7 94 aa13.3□□□□□ -0.28
PHGDH-209ENST00000641074 NCR2O95944 276 aa13.3□□□□□ -0.28
PHGDH-209ENST00000641074 TMEM158Q8WZ71 300 aa13.3□□□□□ -0.28
PHGDH-209ENST00000641074 GAS8-AS1O95177 125 aa13.29□□□□□ -0.28
PHGDH-209ENST00000641074 NIT1Q86X76 327 aa13.29□□□□□ -0.28
PHGDH-209ENST00000641074 C14orf178Q8N769 122 aaPredicted RBP13.29□□□□□ -0.28
PHGDH-209ENST00000641074 OR10D4PQ8NGN7 298 aa13.29□□□□□ -0.28
PHGDH-209ENST00000641074 URB1-AS1Q96HZ7 61 aa13.29□□□□□ -0.28
PHGDH-209ENST00000641074 TMEM18Q96B42 140 aa13.28□□□□□ -0.28
PHGDH-209ENST00000641074 PACRGQ96M98 296 aaPredicted RBP13.28□□□□□ -0.28
PHGDH-209ENST00000641074 AP1S3Q96PC3 154 aa13.28□□□□□ -0.28
PHGDH-209ENST00000641074 STAB1Q9NY15 2570 aa13.28□□□□□ -0.28
PHGDH-209ENST00000641074 WIPF1O43516 503 aa13.27□□□□□ -0.28
PHGDH-209ENST00000641074 PPBPP02775 128 aa13.27□□□□□ -0.28
PHGDH-209ENST00000641074 TMEM208Q9BTX3 173 aa13.27□□□□□ -0.28
PHGDH-209ENST00000641074 DPH3P1Q9H4G8 78 aa13.27□□□□□ -0.28
PHGDH-209ENST00000641074 NPYP01303 97 aa13.27□□□□□ -0.29
PHGDH-209ENST00000641074 RNASEKQ6P5S7 137 aaKnown RBP13.27□□□□□ -0.29
PHGDH-209ENST00000641074 JPT2Q9H910 190 aa13.27□□□□□ -0.29
PHGDH-209ENST00000641074 IGHV3OR16-12A0A075B7B8 117 aa13.26□□□□□ -0.29
PHGDH-209ENST00000641074 TRAV26-2A0A0B4J265 109 aa13.26□□□□□ -0.29
PHGDH-209ENST00000641074 GATA1P15976 413 aaPredicted RBP13.26□□□□□ -0.29
PHGDH-209ENST00000641074 MORN3Q6PF18 240 aaPredicted RBP13.26□□□□□ -0.29
PHGDH-209ENST00000641074 SYT8Q8NBV8 401 aa13.26□□□□□ -0.29
PHGDH-209ENST00000641074 KIF25-AS1Q9Y6Z4 181 aa13.26□□□□□ -0.29
PHGDH-209ENST00000641074 C11orf72Q8NBR9 251 aa13.25□□□□□ -0.29
PHGDH-209ENST00000641074 SAMD10Q9BYL1 202 aa13.25□□□□□ -0.29
PHGDH-209ENST00000641074 GSN-AS1Q9NRJ2 163 aa13.25□□□□□ -0.29
PHGDH-209ENST00000641074 LINC00614P0C842 121 aa13.25□□□□□ -0.29
PHGDH-209ENST00000641074 AZU1P20160 251 aa13.25□□□□□ -0.29
PHGDH-209ENST00000641074 ZNF415Q09FC8 603 aa13.25□□□□□ -0.29
PHGDH-209ENST00000641074 ZNF876PQ49A33 203 aa13.25□□□□□ -0.29
PHGDH-209ENST00000641074 LOC389332A0A1B0GUA5 103 aa13.24□□□□□ -0.29
PHGDH-209ENST00000641074 PMCHP20382 165 aa13.24□□□□□ -0.29
PHGDH-209ENST00000641074 LINC00315P59091 139 aa13.24□□□□□ -0.29
PHGDH-209ENST00000641074 FAM19A2Q8N3H0 131 aa13.24□□□□□ -0.29
PHGDH-209ENST00000641074 CSNK1G2-AS1Q8NCQ2 148 aa13.24□□□□□ -0.29
PHGDH-209ENST00000641074 C1QTNF4Q9BXJ3 329 aa13.24□□□□□ -0.29
PHGDH-209ENST00000641074 HSBP1O75506 76 aa13.23□□□□□ -0.29
PHGDH-209ENST00000641074 TNFRSF6BO95407 300 aa13.23□□□□□ -0.29
PHGDH-209ENST00000641074 MGPP08493 103 aa13.23□□□□□ -0.29
PHGDH-209ENST00000641074 AMTP48728 403 aa13.23□□□□□ -0.29
PHGDH-209ENST00000641074 CHCHD1Q96BP2 118 aaKnown RBP13.23□□□□□ -0.29
PHGDH-209ENST00000641074 MRAP2Q96G30 205 aa13.23□□□□□ -0.29
PHGDH-209ENST00000641074 LAMTOR2Q9Y2Q5 125 aa13.23□□□□□ -0.29
PHGDH-209ENST00000641074 A0A087WWL8 130 aa13.22□□□□□ -0.29
PHGDH-209ENST00000641074 SMIM17P0DL12 118 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 84.6 ms