RNA–Protein interactions for RNA: ENST00000640501.1

PNKP-231, Transcript of polynucleotide kinase 3'-phosphatase, human

TSL 5

Gene PNKP, Length 151 nt, Biotype non stop decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PNKP-231	ENST00000640501	LGALS9B	Q3B8N2	356 aa		6.21	□□□□□ -1.42
PNKP-231	ENST00000640501	LINC01545	Q5VT33	79 aa		6.21	□□□□□ -1.42
PNKP-231	ENST00000640501	LGALS9C	Q6DKI2	356 aa		6.21	□□□□□ -1.42
PNKP-231	ENST00000640501	HIST2H2BC	Q6DN03	193 aa		6.21	□□□□□ -1.42
PNKP-231	ENST00000640501	ZNF575	Q86XF7	245 aa		6.21	□□□□□ -1.42
PNKP-231	ENST00000640501		Q8N976	141 aa		6.21	□□□□□ -1.42
PNKP-231	ENST00000640501	DLX4	Q92988	240 aa	Predicted RBP	6.21	□□□□□ -1.42
PNKP-231	ENST00000640501	C14orf144	Q96I85	54 aa		6.21	□□□□□ -1.42
PNKP-231	ENST00000640501	PMCHL2	Q9BQD1	86 aa		6.21	□□□□□ -1.42
PNKP-231	ENST00000640501	DOPEY2	Q9Y3R5	2298 aa		6.21	□□□□□ -1.42
PNKP-231	ENST00000640501	TEX15	Q9BXT5	2789 aa		6.21	□□□□□ -1.42
PNKP-231	ENST00000640501	CBY3	A6NI87	242 aa		6.2	□□□□□ -1.42
PNKP-231	ENST00000640501		H7C1H1	209 aa		6.2	□□□□□ -1.42
PNKP-231	ENST00000640501	INS	P01308	110 aa		6.2	□□□□□ -1.42
PNKP-231	ENST00000640501	IGKV3-20	P01619	116 aa		6.2	□□□□□ -1.42
PNKP-231	ENST00000640501	RNASE3	P12724	160 aa	Known RBP	6.2	□□□□□ -1.42
PNKP-231	ENST00000640501	FOSL1	P15407	271 aa		6.2	□□□□□ -1.42
PNKP-231	ENST00000640501	EDN2	P20800	178 aa		6.2	□□□□□ -1.42
PNKP-231	ENST00000640501	HNRNPA3	P51991	378 aa	Known RBP	6.2	□□□□□ -1.42
PNKP-231	ENST00000640501	SUMO2	P61956	95 aa	Known RBP	6.2	□□□□□ -1.42
PNKP-231	ENST00000640501	SPINK13	Q1W4C9	94 aa		6.2	□□□□□ -1.42
PNKP-231	ENST00000640501	DEFB114	Q30KQ6	69 aa		6.2	□□□□□ -1.42
PNKP-231	ENST00000640501	PIK3CD-AS1	Q5SR53	167 aa		6.2	□□□□□ -1.42
PNKP-231	ENST00000640501	TMEM61	Q8N0U2	210 aa		6.2	□□□□□ -1.42
PNKP-231	ENST00000640501	C14orf178	Q8N769	122 aa	Predicted RBP	6.2	□□□□□ -1.42
PNKP-231	ENST00000640501	LINC01006	Q8NI28	216 aa		6.2	□□□□□ -1.42
PNKP-231	ENST00000640501	IFI27L1	Q96BM0	104 aa		6.2	□□□□□ -1.42
PNKP-231	ENST00000640501	SMIM2	Q9BVW6	85 aa		6.2	□□□□□ -1.42
PNKP-231	ENST00000640501	ESM1	Q9NQ30	184 aa		6.2	□□□□□ -1.42
PNKP-231	ENST00000640501	RNF114	Q9Y508	228 aa		6.2	□□□□□ -1.42
PNKP-231	ENST00000640501		A8MTW9	85 aa		6.19	□□□□□ -1.42
PNKP-231	ENST00000640501	OR11H12	B2RN74	326 aa		6.19	□□□□□ -1.42
PNKP-231	ENST00000640501		H0Y8G0	127 aa		6.19	□□□□□ -1.42
PNKP-231	ENST00000640501	GNRH2	O43555	120 aa		6.19	□□□□□ -1.42
PNKP-231	ENST00000640501	NUDT3	O95989	172 aa		6.19	□□□□□ -1.42
PNKP-231	ENST00000640501	DEFB1	P60022	68 aa		6.19	□□□□□ -1.42
PNKP-231	ENST00000640501	RPL32	P62910	135 aa	Known RBP	6.19	□□□□□ -1.42
PNKP-231	ENST00000640501	ZNF415	Q09FC8	603 aa		6.19	□□□□□ -1.42
PNKP-231	ENST00000640501	PRR31	Q5SQ13	230 aa		6.19	□□□□□ -1.42
PNKP-231	ENST00000640501		Q6ZN92	141 aa		6.19	□□□□□ -1.42
PNKP-231	ENST00000640501	STH	Q8IWL8	128 aa		6.19	□□□□□ -1.42
PNKP-231	ENST00000640501	C9orf85	Q96MD7	179 aa		6.19	□□□□□ -1.42
PNKP-231	ENST00000640501	LINC00467	Q9BRT7	94 aa		6.19	□□□□□ -1.42
PNKP-231	ENST00000640501	MAP6D1	Q9H9H5	199 aa		6.19	□□□□□ -1.42
PNKP-231	ENST00000640501	GOLT1B	Q9Y3E0	138 aa		6.19	□□□□□ -1.42
PNKP-231	ENST00000640501	FLNA	P21333	2647 aa	Known RBP	6.18	□□□□□ -1.42
PNKP-231	ENST00000640501	IGHV3-16	A0A0C4DH30	117 aa		6.18	□□□□□ -1.42
PNKP-231	ENST00000640501		F5H697	171 aa		6.18	□□□□□ -1.42
PNKP-231	ENST00000640501		H3BMM0	161 aa		6.18	□□□□□ -1.42
PNKP-231	ENST00000640501	BORCS8-MEF2B	H3BNR1	382 aa	Predicted RBP	6.18	□□□□□ -1.42
PNKP-231	ENST00000640501	PRSS1	P07477	247 aa		6.18	□□□□□ -1.42
PNKP-231	ENST00000640501	IGLC3	P0DOY3	106 aa		6.18	□□□□□ -1.42
PNKP-231	ENST00000640501	CD28	P10747	220 aa		6.18	□□□□□ -1.42
PNKP-231	ENST00000640501	CD300E	Q496F6	205 aa	Predicted RBP	6.18	□□□□□ -1.42
PNKP-231	ENST00000640501	ADAMTSL5	Q6ZMM2	481 aa		6.18	□□□□□ -1.42
PNKP-231	ENST00000640501	C18orf65	Q6ZTR6	163 aa		6.18	□□□□□ -1.42
PNKP-231	ENST00000640501	POM121L12	Q8N7R1	296 aa		6.18	□□□□□ -1.42
PNKP-231	ENST00000640501	NRAC	Q8N912	160 aa		6.18	□□□□□ -1.42
PNKP-231	ENST00000640501	PTH2	Q96A98	100 aa		6.18	□□□□□ -1.42
PNKP-231	ENST00000640501	DUX3	Q96PT4	197 aa		6.18	□□□□□ -1.42
PNKP-231	ENST00000640501	KIR2DL4	Q99706	377 aa		6.18	□□□□□ -1.42
PNKP-231	ENST00000640501	CITED2	Q99967	270 aa	Predicted RBP	6.18	□□□□□ -1.42
PNKP-231	ENST00000640501	C2orf88	Q9BSF0	95 aa		6.18	□□□□□ -1.42
PNKP-231	ENST00000640501	SPX	Q9BT56	116 aa		6.18	□□□□□ -1.42
PNKP-231	ENST00000640501	MXRA5	Q9NR99	2828 aa		6.17	□□□□□ -1.42
PNKP-231	ENST00000640501	TRAV12-2	A0A075B6T6	113 aa		6.17	□□□□□ -1.42
PNKP-231	ENST00000640501		A0A1W2PRX2	142 aa		6.17	□□□□□ -1.42
PNKP-231	ENST00000640501		A8MWV9	139 aa		6.17	□□□□□ -1.42
PNKP-231	ENST00000640501	VCY	O14598	125 aa		6.17	□□□□□ -1.42
PNKP-231	ENST00000640501	SAP30	O75446	220 aa		6.17	□□□□□ -1.42
PNKP-231	ENST00000640501	ZNF56	Q15929	161 aa		6.17	□□□□□ -1.42
PNKP-231	ENST00000640501	SLC25A34	Q6PIV7	304 aa		6.17	□□□□□ -1.42
PNKP-231	ENST00000640501	AMTN	Q6UX39	209 aa		6.17	□□□□□ -1.42
PNKP-231	ENST00000640501	TRPT1	Q86TN4	253 aa	Known RBP	6.17	□□□□□ -1.42
PNKP-231	ENST00000640501	NDUFA11	Q86Y39	141 aa		6.17	□□□□□ -1.42
PNKP-231	ENST00000640501	ATOH7	Q8N100	152 aa		6.17	□□□□□ -1.42
PNKP-231	ENST00000640501		Q8N1Y9	231 aa		6.17	□□□□□ -1.42
PNKP-231	ENST00000640501	TMEM158	Q8WZ71	300 aa		6.17	□□□□□ -1.42
PNKP-231	ENST00000640501	FAM110A	Q9BQ89	295 aa		6.17	□□□□□ -1.42
PNKP-231	ENST00000640501	TMEM208	Q9BTX3	173 aa		6.17	□□□□□ -1.42
PNKP-231	ENST00000640501	C1QTNF4	Q9BXJ3	329 aa		6.17	□□□□□ -1.42
PNKP-231	ENST00000640501	MRPS16	Q9Y3D3	137 aa	Known RBP	6.17	□□□□□ -1.42
PNKP-231	ENST00000640501	SELENOK	Q9Y6D0	94 aa		6.17	□□□□□ -1.42
PNKP-231	ENST00000640501	ZAN	Q9Y493	2812 aa		6.17	□□□□□ -1.42
PNKP-231	ENST00000640501	IGLV2-18	A0A075B6J9	118 aa		6.16	□□□□□ -1.42
PNKP-231	ENST00000640501	TRAV26-2	A0A0B4J265	109 aa		6.16	□□□□□ -1.42
PNKP-231	ENST00000640501	KNCN	A6PVL3	124 aa		6.16	□□□□□ -1.42
PNKP-231	ENST00000640501	RHOD	O00212	210 aa		6.16	□□□□□ -1.42
PNKP-231	ENST00000640501	IGLL1	P15814	213 aa		6.16	□□□□□ -1.42
PNKP-231	ENST00000640501	PLN	P26678	52 aa		6.16	□□□□□ -1.42
PNKP-231	ENST00000640501	ZNF876P	Q49A33	203 aa		6.16	□□□□□ -1.42
PNKP-231	ENST00000640501		Q6ZQT7	251 aa		6.16	□□□□□ -1.42
PNKP-231	ENST00000640501	LINC00173	Q6ZV60	143 aa		6.16	□□□□□ -1.42
PNKP-231	ENST00000640501	HELZ2	Q9BYK8	2649 aa	Known RBP	6.16	□□□□□ -1.42
PNKP-231	ENST00000640501	UNC79	Q9P2D8	2635 aa		6.16	□□□□□ -1.42
PNKP-231	ENST00000640501	CELSR1	Q9NYQ6	3014 aa		6.15	□□□□□ -1.42
PNKP-231	ENST00000640501	MYO9A	B2RTY4	2548 aa		6.15	□□□□□ -1.42
PNKP-231	ENST00000640501		A0A096LNJ9	63 aa		6.15	□□□□□ -1.42
PNKP-231	ENST00000640501	TRBV6-5	A0A0K0K1A5	114 aa		6.15	□□□□□ -1.42
PNKP-231	ENST00000640501		M0R2P5	195 aa		6.15	□□□□□ -1.42

Retrieved 100 of 20,778 RNA–protein pairs in 100.1 ms